RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 PGLYRP1O75594 196 aaPredicted RBP11.48□□□□□ -0.57
COMMD4-225ENST00000569245 MOSP00540 346 aa11.48□□□□□ -0.57
COMMD4-225ENST00000569245 AKR1C4P17516 323 aa11.48□□□□□ -0.57
COMMD4-225ENST00000569245 CD1BP29016 333 aa11.48□□□□□ -0.57
COMMD4-225ENST00000569245 S100GP29377 79 aa11.48□□□□□ -0.57
COMMD4-225ENST00000569245 ZNF137PP52743 207 aa11.48□□□□□ -0.57
COMMD4-225ENST00000569245 DEFA6Q01524 100 aa11.48□□□□□ -0.57
COMMD4-225ENST00000569245 PHLDA2Q53GA4 152 aa11.48□□□□□ -0.57
COMMD4-225ENST00000569245 FAM71F2Q6NXP2 309 aa11.48□□□□□ -0.57
COMMD4-225ENST00000569245 C5orf56Q8N8D9 126 aa11.48□□□□□ -0.57
COMMD4-225ENST00000569245 OR4X2Q8NGF9 303 aa11.48□□□□□ -0.57
COMMD4-225ENST00000569245 WIPF2Q8TF74 440 aaPredicted RBP11.48□□□□□ -0.57
COMMD4-225ENST00000569245 R3HDM4Q96D70 268 aa11.48□□□□□ -0.57
COMMD4-225ENST00000569245 C5orf30Q96GV9 206 aa11.48□□□□□ -0.57
COMMD4-225ENST00000569245 ZNF251Q9BRH9 671 aa11.48□□□□□ -0.57
COMMD4-225ENST00000569245 TET2Q6N021 2002 aaPredicted RBP11.47□□□□□ -0.57
COMMD4-225ENST00000569245 SAA2-SAA4A0A096LPE2 208 aa11.47□□□□□ -0.57
COMMD4-225ENST00000569245 SNRPGP15A8MWD9 76 aa11.47□□□□□ -0.57
COMMD4-225ENST00000569245 MPPED1O15442 326 aa11.47□□□□□ -0.57
COMMD4-225ENST00000569245 FGF16O43320 207 aa11.47□□□□□ -0.57
COMMD4-225ENST00000569245 PROP1O75360 226 aa11.47□□□□□ -0.57
COMMD4-225ENST00000569245 SAA2P0DJI9 122 aaPredicted RBP11.47□□□□□ -0.57
COMMD4-225ENST00000569245 SUPT4H1P63272 117 aaKnown RBP11.47□□□□□ -0.57
COMMD4-225ENST00000569245 DHRS2Q13268 280 aa11.47□□□□□ -0.57
COMMD4-225ENST00000569245 PPP1R1AQ13522 171 aa11.47□□□□□ -0.57
COMMD4-225ENST00000569245 EBI3Q14213 229 aa11.47□□□□□ -0.57
COMMD4-225ENST00000569245 C4orf46Q504U0 113 aa11.47□□□□□ -0.57
COMMD4-225ENST00000569245 KHDC1LQ5JSQ8 128 aa11.47□□□□□ -0.57
COMMD4-225ENST00000569245 ZNF66Q6ZN08 573 aa11.47□□□□□ -0.57
COMMD4-225ENST00000569245 ZNF833PQ6ZTB9 187 aa11.47□□□□□ -0.57
COMMD4-225ENST00000569245 KCTD9Q7L273 389 aa11.47□□□□□ -0.57
COMMD4-225ENST00000569245 SGPP2Q8IWX5 399 aa11.47□□□□□ -0.57
COMMD4-225ENST00000569245 OR4F17Q8NGA8 305 aa11.47□□□□□ -0.57
COMMD4-225ENST00000569245 GALNT14Q96FL9 552 aa11.47□□□□□ -0.57
COMMD4-225ENST00000569245 OR4F4Q96R69 305 aa11.47□□□□□ -0.57
COMMD4-225ENST00000569245 HSD17B10Q99714 261 aaKnown RBP11.47□□□□□ -0.57
COMMD4-225ENST00000569245 NAA60Q9H7X0 242 aa11.47□□□□□ -0.57
COMMD4-225ENST00000569245 GPN1Q9HCN4 374 aaPredicted RBP11.47□□□□□ -0.57
COMMD4-225ENST00000569245 ALG5Q9Y673 324 aa11.47□□□□□ -0.57
COMMD4-225ENST00000569245 TEX13DA0A0J9YY54 714 aaPredicted RBP11.46□□□□□ -0.57
COMMD4-225ENST00000569245 C9orf170A2RU37 121 aa11.46□□□□□ -0.57
COMMD4-225ENST00000569245 B3GALNT1O75752 331 aa11.46□□□□□ -0.57
COMMD4-225ENST00000569245 SFT2D2O95562 160 aa11.46□□□□□ -0.57
COMMD4-225ENST00000569245 OPN1MWP04001 364 aa11.46□□□□□ -0.57
COMMD4-225ENST00000569245 OPN1MW2P0DN77 364 aa11.46□□□□□ -0.57
COMMD4-225ENST00000569245 OPN1MW3P0DN78 364 aa11.46□□□□□ -0.57
COMMD4-225ENST00000569245 SLC35E3Q7Z769 313 aa11.46□□□□□ -0.57
COMMD4-225ENST00000569245 LYG2Q86SG7 212 aa11.46□□□□□ -0.57
COMMD4-225ENST00000569245 TBC1D26Q86UD7 250 aa11.46□□□□□ -0.57
COMMD4-225ENST00000569245 ZNF431Q8TF32 576 aaPredicted RBP11.46□□□□□ -0.57
COMMD4-225ENST00000569245 S1PR3Q99500 378 aa11.46□□□□□ -0.57
COMMD4-225ENST00000569245 RASL11BQ9BPW5 248 aa11.46□□□□□ -0.57
COMMD4-225ENST00000569245 SEC22CQ9BRL7 303 aa11.46□□□□□ -0.57
COMMD4-225ENST00000569245 KCNIP3Q9Y2W7 256 aa11.46□□□□□ -0.57
COMMD4-225ENST00000569245 C3orf85A0A1B0GTC6 90 aa11.45□□□□□ -0.58
COMMD4-225ENST00000569245 A0A1B0GVG6 124 aa11.45□□□□□ -0.58
COMMD4-225ENST00000569245 PSMB11A5LHX3 300 aa11.45□□□□□ -0.58
COMMD4-225ENST00000569245 HLA-AP01891 365 aaKnown RBP11.45□□□□□ -0.58
COMMD4-225ENST00000569245 ANXA3P12429 323 aa11.45□□□□□ -0.58
COMMD4-225ENST00000569245 F2RP25116 425 aa11.45□□□□□ -0.58
COMMD4-225ENST00000569245 DUTP33316 252 aaKnown RBP11.45□□□□□ -0.58
COMMD4-225ENST00000569245 CD83Q01151 205 aa11.45□□□□□ -0.58
COMMD4-225ENST00000569245 RPL39P5Q59GN2 51 aa11.45□□□□□ -0.58
COMMD4-225ENST00000569245 C10orf99Q6UWK7 81 aa11.45□□□□□ -0.58
COMMD4-225ENST00000569245 ZNF329Q86UD4 541 aa11.45□□□□□ -0.58
COMMD4-225ENST00000569245 C1QL4Q86Z23 238 aa11.45□□□□□ -0.58
COMMD4-225ENST00000569245 FOXRED2Q8IWF2 684 aa11.45□□□□□ -0.58
COMMD4-225ENST00000569245 TCTEX1D1Q8N7M0 179 aa11.45□□□□□ -0.58
COMMD4-225ENST00000569245 OR52B4Q8NGK2 314 aa11.45□□□□□ -0.58
COMMD4-225ENST00000569245 RBMXL1Q96E39 390 aaKnown RBP11.45□□□□□ -0.58
COMMD4-225ENST00000569245 NOL4LQ96MY1 436 aaPredicted RBP11.45□□□□□ -0.58
COMMD4-225ENST00000569245 OR51J1Q9H342 316 aa11.45□□□□□ -0.58
COMMD4-225ENST00000569245 LINC00527Q9UJ94 153 aa11.45□□□□□ -0.58
COMMD4-225ENST00000569245 TSSC4Q9Y5U2 329 aaPredicted RBP11.45□□□□□ -0.58
COMMD4-225ENST00000569245 NOTCH1P46531 2555 aa11.44□□□□□ -0.58
COMMD4-225ENST00000569245 A0A0B4J2A0 478 aa11.44□□□□□ -0.58
COMMD4-225ENST00000569245 H0Y980 276 aa11.44□□□□□ -0.58
COMMD4-225ENST00000569245 M0R1X1 148 aa11.44□□□□□ -0.58
COMMD4-225ENST00000569245 KCNAB3O43448 404 aa11.44□□□□□ -0.58
COMMD4-225ENST00000569245 TNFSF12O43508 249 aa11.44□□□□□ -0.58
COMMD4-225ENST00000569245 CREBL2O60519 120 aaPredicted RBP11.44□□□□□ -0.58
COMMD4-225ENST00000569245 DUS4LO95620 317 aaKnown RBP11.44□□□□□ -0.58
COMMD4-225ENST00000569245 PF4V1P10720 104 aa11.44□□□□□ -0.58
COMMD4-225ENST00000569245 VAMP1P23763 118 aa11.44□□□□□ -0.58
COMMD4-225ENST00000569245 CATR1Q13166 79 aa11.44□□□□□ -0.58
COMMD4-225ENST00000569245 TCTEX1D4Q5JR98 221 aa11.44□□□□□ -0.58
COMMD4-225ENST00000569245 Q8N6K4 173 aa11.44□□□□□ -0.58
COMMD4-225ENST00000569245 OR8H1Q8NGG4 311 aa11.44□□□□□ -0.58
COMMD4-225ENST00000569245 MITD1Q8WV92 249 aa11.44□□□□□ -0.58
COMMD4-225ENST00000569245 ADTRPQ96IZ2 230 aa11.44□□□□□ -0.58
COMMD4-225ENST00000569245 GPHA2Q96T91 129 aa11.44□□□□□ -0.58
COMMD4-225ENST00000569245 MRPL20Q9BYC9 149 aaKnown RBP11.44□□□□□ -0.58
COMMD4-225ENST00000569245 FAM212BQ9NTI7 297 aaPredicted RBP11.44□□□□□ -0.58
COMMD4-225ENST00000569245 SHPKQ9UHJ6 478 aa11.44□□□□□ -0.58
COMMD4-225ENST00000569245 ADARB2-AS1A8MUL3 147 aa11.43□□□□□ -0.58
COMMD4-225ENST00000569245 WIPF1O43516 503 aa11.43□□□□□ -0.58
COMMD4-225ENST00000569245 IGHG2P01859 326 aa11.43□□□□□ -0.58
COMMD4-225ENST00000569245 OR5AC1P0C628 307 aa11.43□□□□□ -0.58
COMMD4-225ENST00000569245 UCP1P25874 307 aa11.43□□□□□ -0.58
COMMD4-225ENST00000569245 THBS3P49746 956 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms