RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 TMEM177Q53S58 311 aa15.12■□□□□ 0.01
COMMD4-213ENST00000565834 Q5BKY6 102 aa15.12■□□□□ 0.01
COMMD4-213ENST00000565834 SSX9Q7RTT3 188 aa15.12■□□□□ 0.01
COMMD4-213ENST00000565834 CIARTQ8N365 385 aaPredicted RBP15.12■□□□□ 0.01
COMMD4-213ENST00000565834 OR4C13Q8NGP0 309 aa15.12■□□□□ 0.01
COMMD4-213ENST00000565834 RBMXL1Q96E39 390 aaKnown RBP15.12■□□□□ 0.01
COMMD4-213ENST00000565834 MALSU1Q96EH3 234 aa15.12■□□□□ 0.01
COMMD4-213ENST00000565834 CACNG5Q9UF02 275 aa15.12■□□□□ 0.01
COMMD4-213ENST00000565834 G3V3Q6 166 aa15.12■□□□□ 0.01
COMMD4-213ENST00000565834 TIMM23O14925 209 aa15.12■□□□□ 0.01
COMMD4-213ENST00000565834 SMAD7O15105 426 aaKnown RBP15.12■□□□□ 0.01
COMMD4-213ENST00000565834 FGL1Q08830 312 aa15.12■□□□□ 0.01
COMMD4-213ENST00000565834 IL15RAQ13261 267 aa15.12■□□□□ 0.01
COMMD4-213ENST00000565834 VKORC1L1Q8N0U8 176 aa15.12■□□□□ 0.01
COMMD4-213ENST00000565834 PIP4P2Q8N4L2 257 aa15.12■□□□□ 0.01
COMMD4-213ENST00000565834 OR1S1Q8NH92 325 aa15.12■□□□□ 0.01
COMMD4-213ENST00000565834 C17orf50Q8WW18 174 aa15.12■□□□□ 0.01
COMMD4-213ENST00000565834 RHOVQ96L33 236 aa15.12■□□□□ 0.01
COMMD4-213ENST00000565834 HARBI1Q96MB7 349 aa15.12■□□□□ 0.01
COMMD4-213ENST00000565834 AIFM2Q9BRQ8 373 aa15.12■□□□□ 0.01
COMMD4-213ENST00000565834 MYO9AB2RTY4 2548 aa15.11■□□□□ 0.01
COMMD4-213ENST00000565834 SCGB1D2O95969 90 aa15.11■□□□□ 0.01
COMMD4-213ENST00000565834 AVPP01185 164 aa15.11■□□□□ 0.01
COMMD4-213ENST00000565834 IGHV4-38-2P0DP08 117 aa15.11■□□□□ 0.01
COMMD4-213ENST00000565834 PSMB6P28072 239 aa15.11■□□□□ 0.01
COMMD4-213ENST00000565834 RUSC1-AS1Q66K80 236 aa15.11■□□□□ 0.01
COMMD4-213ENST00000565834 Q6ZRM9 215 aa15.11■□□□□ 0.01
COMMD4-213ENST00000565834 DYNAPQ8N1N2 210 aa15.11■□□□□ 0.01
COMMD4-213ENST00000565834 OR4D5Q8NGN0 318 aa15.11■□□□□ 0.01
COMMD4-213ENST00000565834 TMEM140Q9NV12 185 aa15.11■□□□□ 0.01
COMMD4-213ENST00000565834 ARHGDIBP52566 201 aa15.1■□□□□ 0.01
COMMD4-213ENST00000565834 S100A10P60903 97 aa15.1■□□□□ 0.01
COMMD4-213ENST00000565834 RPS16P62249 146 aaKnown RBP15.1■□□□□ 0.01
COMMD4-213ENST00000565834 RAB32Q13637 225 aa15.1■□□□□ 0.01
COMMD4-213ENST00000565834 POU2AF1Q16633 256 aa15.1■□□□□ 0.01
COMMD4-213ENST00000565834 NOXA1Q86UR1 476 aa15.1■□□□□ 0.01
COMMD4-213ENST00000565834 CFHR4Q92496 578 aa15.1■□□□□ 0.01
COMMD4-213ENST00000565834 AJUBAQ96IF1 538 aa15.1■□□□□ 0.01
COMMD4-213ENST00000565834 MS4A7Q9GZW8 240 aaPredicted RBP15.1■□□□□ 0.01
COMMD4-213ENST00000565834 AKAP9Q99996 3911 aa15.1■□□□□ 0.01
COMMD4-213ENST00000565834 TRAV14DV4A0A0A6YYC5 116 aa15.09■□□□□ 0.01
COMMD4-213ENST00000565834 MPC2O95563 127 aa15.09■□□□□ 0.01
COMMD4-213ENST00000565834 PAX6P26367 422 aa15.09■□□□□ 0.01
COMMD4-213ENST00000565834 CD1BP29016 333 aa15.09■□□□□ 0.01
COMMD4-213ENST00000565834 HABP2Q14520 560 aaPredicted RBP15.09■□□□□ 0.01
COMMD4-213ENST00000565834 BRD3OSQ6XYD6 125 aa15.09■□□□□ 0.01
COMMD4-213ENST00000565834 COA4Q9NYJ1 87 aa15.09■□□□□ 0.01
COMMD4-213ENST00000565834 TEX15Q9BXT5 2789 aa15.09■□□□□ 0.01
COMMD4-213ENST00000565834 CSPG4Q6UVK1 2322 aa15.09■□□□□ 0.01
COMMD4-213ENST00000565834 FAM90A9PA6NNJ1 464 aa15.09■□□□□ 0.01
COMMD4-213ENST00000565834 SRRM4A7MD48 611 aaKnown RBP15.09■□□□□ 0.01
COMMD4-213ENST00000565834 PITX3O75364 302 aa15.09■□□□□ 0.01
COMMD4-213ENST00000565834 MBPP02686 304 aaPredicted RBP15.09■□□□□ 0.01
COMMD4-213ENST00000565834 PET100P0DJ07 73 aa15.09■□□□□ 0.01
COMMD4-213ENST00000565834 NKX2-1P43699 371 aaPredicted RBP15.09■□□□□ 0.01
COMMD4-213ENST00000565834 KLF17Q5JT82 389 aaPredicted RBP15.09■□□□□ 0.01
COMMD4-213ENST00000565834 OR4A47Q6IF82 309 aa15.09■□□□□ 0.01
COMMD4-213ENST00000565834 FOXRED2Q8IWF2 684 aa15.09■□□□□ 0.01
COMMD4-213ENST00000565834 HYLS1Q96M11 299 aa15.09■□□□□ 0.01
COMMD4-213ENST00000565834 ZFP57Q9NU63 452 aa15.09■□□□□ 0.01
COMMD4-213ENST00000565834 VENTXO95231 258 aa15.08■□□□□ 0
COMMD4-213ENST00000565834 OR9G9P0C7N8 305 aa15.08■□□□□ 0
COMMD4-213ENST00000565834 LGALS7P47929 136 aa15.08■□□□□ 0
COMMD4-213ENST00000565834 C11orf87Q6NUJ2 197 aa15.08■□□□□ 0
COMMD4-213ENST00000565834 OR11H4Q8NGC9 324 aa15.08■□□□□ 0
COMMD4-213ENST00000565834 THAP6Q8TBB0 222 aa15.08■□□□□ 0
COMMD4-213ENST00000565834 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.08■□□□□ 0
COMMD4-213ENST00000565834 LSM5Q9Y4Y9 91 aaKnown RBP15.08■□□□□ 0
COMMD4-213ENST00000565834 FXYD6-FXYD2A0A087WZ82 144 aa15.07■□□□□ 0
COMMD4-213ENST00000565834 ST8SIA3O43173 380 aa15.07■□□□□ 0
COMMD4-213ENST00000565834 RBMXL2O75526 392 aaKnown RBP15.07■□□□□ 0
COMMD4-213ENST00000565834 NXPH3O95157 252 aa15.07■□□□□ 0
COMMD4-213ENST00000565834 SAA1P0DJI8 122 aaPredicted RBP15.07■□□□□ 0
COMMD4-213ENST00000565834 NKX2-5P52952 324 aaPredicted RBP15.07■□□□□ 0
COMMD4-213ENST00000565834 CXorf66Q5JRM2 361 aaPredicted RBP15.07■□□□□ 0
COMMD4-213ENST00000565834 OR4A16Q8NH70 328 aa15.07■□□□□ 0
COMMD4-213ENST00000565834 MBD2Q9UBB5 411 aa15.07■□□□□ 0
COMMD4-213ENST00000565834 POMT1Q9Y6A1 747 aa15.07■□□□□ 0
COMMD4-213ENST00000565834 K7EPK0 472 aa15.06■□□□□ 0
COMMD4-213ENST00000565834 RLN2P04090 185 aa15.06■□□□□ 0
COMMD4-213ENST00000565834 FAM71E2Q8N5Q1 922 aa15.06■□□□□ 0
COMMD4-213ENST00000565834 RITA1Q96K30 269 aa15.06■□□□□ 0
COMMD4-213ENST00000565834 TSNAXQ99598 290 aaKnown RBP15.06■□□□□ 0
COMMD4-213ENST00000565834 RNF5Q99942 180 aa15.06■□□□□ 0
COMMD4-213ENST00000565834 BET1LQ9NYM9 111 aa15.06■□□□□ 0
COMMD4-213ENST00000565834 NSG2Q9Y328 171 aa15.06■□□□□ 0
COMMD4-213ENST00000565834 CELSR1Q9NYQ6 3014 aa15.06■□□□□ 0
COMMD4-213ENST00000565834 SNAPC5O75971 98 aa15.06■□□□□ 0
COMMD4-213ENST00000565834 IGKV1D-33P01593 117 aa15.06■□□□□ 0
COMMD4-213ENST00000565834 IGKV1-33P01594 117 aa15.06■□□□□ 0
COMMD4-213ENST00000565834 IGLV2-23P01705 113 aa15.06■□□□□ 0
COMMD4-213ENST00000565834 SLC25A4P12235 298 aa15.06■□□□□ 0
COMMD4-213ENST00000565834 BRS3P32247 399 aa15.06■□□□□ 0
COMMD4-213ENST00000565834 OR2B8PP59922 312 aa15.06■□□□□ 0
COMMD4-213ENST00000565834 RELBQ01201 579 aa15.06■□□□□ 0
COMMD4-213ENST00000565834 ID3Q02535 119 aa15.06■□□□□ 0
COMMD4-213ENST00000565834 VMA21Q3ZAQ7 101 aa15.06■□□□□ 0
COMMD4-213ENST00000565834 PRSS54Q6PEW0 395 aa15.06■□□□□ 0
COMMD4-213ENST00000565834 PUSL1Q8N0Z8 303 aaKnown RBP15.06■□□□□ 0
COMMD4-213ENST00000565834 VSTM2AQ8TAG5 236 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms