RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 HOXC5Q00444 222 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 IL15RAQ13261 267 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 FZD2Q14332 565 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 ATP1A1-AS1Q5TC04 95 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 CNIH2Q6PI25 160 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 DEFB125Q8N687 156 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 OR11G2Q8NGC1 345 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 OR10G6Q8NH81 332 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 FXYD5Q96DB9 178 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 TSSK6Q9BXA6 273 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 KRTAP4-8Q9BYQ9 185 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 SLC25A31Q9H0C2 315 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 KCNIP2Q9NS61 270 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 SPANXCQ9NY87 97 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 SNX11Q9Y5W9 270 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 KMT2BQ9UMN6 2715 aaPredicted RBP3.83□□□□□ -1.8
SMG1-207ENST00000563235 RIIAD1A6NNX1 92 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 PDCD5O14737 125 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 ZNF432O94892 652 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 DUS4LO95620 317 aaKnown RBP3.82□□□□□ -1.8
SMG1-207ENST00000563235 APOC3P02656 99 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 SOD3P08294 240 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 SCTP09683 121 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 AKAIN1P0CW23 69 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 GZMBP10144 247 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 CTLA4P16410 223 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 LSM3P62310 102 aaKnown RBP3.82□□□□□ -1.8
SMG1-207ENST00000563235 ZNF92Q03936 586 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 ZNF141Q15928 474 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 TMEM241Q24JQ0 296 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 TSPO2Q5TGU0 170 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 TMEM207Q6UWW9 146 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 SLC35G3Q8N808 338 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 ZNF615Q8N8J6 731 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 SLC25A44Q96H78 314 aaPredicted RBP3.82□□□□□ -1.8
SMG1-207ENST00000563235 FAM218AQ96MZ4 157 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 CHST6Q9GZX3 395 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 PARP11Q9NR21 331 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 DNAJC27Q9NZQ0 273 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 CYSLTR1Q9Y271 337 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 C2orf16Q68DN1 1984 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 SHISA9B4DS77 424 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 D6RAR5 112 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 GDF5P43026 501 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 RPL29P47914 159 aaKnown RBP3.82□□□□□ -1.8
SMG1-207ENST00000563235 GNG4P50150 75 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 TMEM267Q0VDI3 215 aaPredicted RBP3.82□□□□□ -1.8
SMG1-207ENST00000563235 ZNF718Q3SXZ3 478 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 SP6Q3SY56 376 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 MIDNQ504T8 468 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 OR10D4PQ8NGN7 298 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 OR2A1Q8NGT9 310 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 ZNRF4Q8WWF5 429 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 PHYHIPLQ96FC7 376 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 C7orf69Q9H7B7 122 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 TAAR2Q9P1P5 351 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 ZNF106Q9H2Y7 1883 aaKnown RBP3.82□□□□□ -1.8
SMG1-207ENST00000563235 ATG2AQ2TAZ0 1938 aa3.82□□□□□ -1.8
SMG1-207ENST00000563235 PAX4O43316 350 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 SLC37A4O43826 429 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 FAM20BO75063 409 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 NTN1O95631 604 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 ATF1P18846 271 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 AKR1C2P52895 323 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 OR11H7Q8NGC8 314 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 TMEM255BQ8WV15 326 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 DERL3Q96Q80 235 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 SFXN3Q9BWM7 321 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 WDR13Q9H1Z4 485 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 CEP290O15078 2479 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 ZFC3H1O60293 1989 aaKnown RBP3.81□□□□□ -1.8
SMG1-207ENST00000563235 TMEM269A0A1B0GVZ9 245 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 A0A1B0GWB2 263 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 TMEM212A6NML5 194 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 C11orf98E9PRG8 122 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 APOC4-APOC2K7ER74 178 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 NPFFO15130 113 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 TNFSF13O75888 250 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 OR2A4O95047 310 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 NDUFC2O95298 119 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 APOC2P02655 101 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 SLC2A2P11168 524 aaPredicted RBP3.81□□□□□ -1.8
SMG1-207ENST00000563235 IGFBP6P24592 240 aaPredicted RBP3.81□□□□□ -1.8
SMG1-207ENST00000563235 BTCP35070 178 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 SNRPFP62306 86 aaKnown RBP3.81□□□□□ -1.8
SMG1-207ENST00000563235 PAX8Q06710 450 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 ENDOGQ14249 297 aaKnown RBP3.81□□□□□ -1.8
SMG1-207ENST00000563235 C12orf74Q32Q52 190 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 FBXW12Q6X9E4 464 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 DNM1P46Q6ZS02 220 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 OR2A7Q96R45 310 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 MCTS1Q9ULC4 181 aaKnown RBP3.81□□□□□ -1.8
SMG1-207ENST00000563235 PCYT1BQ9Y5K3 369 aaPredicted RBP3.81□□□□□ -1.8
SMG1-207ENST00000563235 SCN5AQ14524 2016 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 A0A0G2JMZ2 1700 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 LRRC37A2A6NM11 1700 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 LRRC37AA6NMS7 1700 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 BAHCC1Q9P281 2608 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 DOCK6Q96HP0 2047 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 C15orf62A8K5M9 175 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms