RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 THBS3P49746 956 aa15.67■□□□□ 0.1
SMPD3-203ENST00000563226 ERVK-16P61578 105 aa15.67■□□□□ 0.1
SMPD3-203ENST00000563226 RELBQ01201 579 aa15.67■□□□□ 0.1
SMPD3-203ENST00000563226 SP5Q6BEB4 398 aaPredicted RBP15.67■□□□□ 0.1
SMPD3-203ENST00000563226 UNQ6494/PRO21346Q6UXR6 183 aa15.67■□□□□ 0.1
SMPD3-203ENST00000563226 MUC15Q8N387 334 aa15.67■□□□□ 0.1
SMPD3-203ENST00000563226 DCHS2Q6V1P9 2916 aa15.67■□□□□ 0.1
SMPD3-203ENST00000563226 TSPAN4O14817 238 aa15.66■□□□□ 0.1
SMPD3-203ENST00000563226 IFNA17P01571 189 aa15.66■□□□□ 0.1
SMPD3-203ENST00000563226 H2AFB1P0C5Y9 115 aa15.66■□□□□ 0.1
SMPD3-203ENST00000563226 HNF4GQ14541 408 aa15.66■□□□□ 0.1
SMPD3-203ENST00000563226 TMEM30BQ3MIR4 351 aa15.66■□□□□ 0.1
SMPD3-203ENST00000563226 OR4A16Q8NH70 328 aa15.66■□□□□ 0.1
SMPD3-203ENST00000563226 ABCA4P78363 2273 aa15.66■□□□□ 0.1
SMPD3-203ENST00000563226 FAM90A9PA6NNJ1 464 aa15.66■□□□□ 0.1
SMPD3-203ENST00000563226 PLA2G5P39877 138 aa15.66■□□□□ 0.1
SMPD3-203ENST00000563226 TAGLNQ01995 201 aaKnown RBP15.66■□□□□ 0.1
SMPD3-203ENST00000563226 ZNF672Q499Z4 452 aaPredicted RBP15.66■□□□□ 0.1
SMPD3-203ENST00000563226 LRRC10Q5BKY1 277 aa15.66■□□□□ 0.1
SMPD3-203ENST00000563226 HEPN1Q6WQI6 88 aa15.66■□□□□ 0.1
SMPD3-203ENST00000563226 CIB3Q96Q77 187 aaPredicted RBP15.66■□□□□ 0.1
SMPD3-203ENST00000563226 RARRES2Q99969 163 aa15.66■□□□□ 0.1
SMPD3-203ENST00000563226 C15orf62A8K5M9 175 aa15.65■□□□□ 0.1
SMPD3-203ENST00000563226 CT45A6P0DMU7 189 aa15.65■□□□□ 0.1
SMPD3-203ENST00000563226 CT45A5P0DMU8 189 aa15.65■□□□□ 0.1
SMPD3-203ENST00000563226 CT45A7P0DMV0 189 aa15.65■□□□□ 0.1
SMPD3-203ENST00000563226 TAF15Q92804 592 aaKnown RBP eCLIP15.65■□□□□ 0.1
SMPD3-203ENST00000563226 RPRMQ9NS64 109 aa15.65■□□□□ 0.1
SMPD3-203ENST00000563226 HRNRQ86YZ3 2850 aaPredicted RBP15.64■□□□□ 0.09
SMPD3-203ENST00000563226 DLL1O00548 723 aa15.64■□□□□ 0.09
SMPD3-203ENST00000563226 DAOP14920 347 aa15.64■□□□□ 0.09
SMPD3-203ENST00000563226 COL8A2P25067 703 aa15.64■□□□□ 0.09
SMPD3-203ENST00000563226 PEA15Q15121 130 aa15.64■□□□□ 0.09
SMPD3-203ENST00000563226 LFNGQ8NES3 379 aa15.64■□□□□ 0.09
SMPD3-203ENST00000563226 SFT2D1Q8WV19 159 aa15.64■□□□□ 0.09
SMPD3-203ENST00000563226 PSMG3Q9BT73 122 aaPredicted RBP15.64■□□□□ 0.09
SMPD3-203ENST00000563226 PARD6GQ9BYG4 376 aaPredicted RBP15.64■□□□□ 0.09
SMPD3-203ENST00000563226 OR8U8P0C7N1 319 aa15.64■□□□□ 0.09
SMPD3-203ENST00000563226 TFF3Q07654 80 aa15.64■□□□□ 0.09
SMPD3-203ENST00000563226 OR4A47Q6IF82 309 aa15.64■□□□□ 0.09
SMPD3-203ENST00000563226 TMEM88Q6PEY1 159 aa15.64■□□□□ 0.09
SMPD3-203ENST00000563226 SSX7Q7RTT5 188 aa15.64■□□□□ 0.09
SMPD3-203ENST00000563226 OR10A7Q8NGE5 316 aa15.64■□□□□ 0.09
SMPD3-203ENST00000563226 RHOVQ96L33 236 aa15.64■□□□□ 0.09
SMPD3-203ENST00000563226 KAAG1Q9UBP8 84 aa15.64■□□□□ 0.09
SMPD3-203ENST00000563226 SPCS3P61009 180 aa15.63■□□□□ 0.09
SMPD3-203ENST00000563226 ZNF726P1Q15940 193 aa15.63■□□□□ 0.09
SMPD3-203ENST00000563226 HFEQ30201 348 aa15.63■□□□□ 0.09
SMPD3-203ENST00000563226 OR10P1Q8NGE3 313 aa15.63■□□□□ 0.09
SMPD3-203ENST00000563226 ADTRPQ96IZ2 230 aa15.63■□□□□ 0.09
SMPD3-203ENST00000563226 TMEM147Q9BVK8 224 aa15.63■□□□□ 0.09
SMPD3-203ENST00000563226 IGKV1-16P04430 117 aa15.63■□□□□ 0.09
SMPD3-203ENST00000563226 ARG1P05089 322 aa15.63■□□□□ 0.09
SMPD3-203ENST00000563226 VDAC2P45880 294 aaPredicted RBP15.63■□□□□ 0.09
SMPD3-203ENST00000563226 ELLP55199 621 aaPredicted RBP15.63■□□□□ 0.09
SMPD3-203ENST00000563226 DPPA3Q6W0C5 159 aa15.63■□□□□ 0.09
SMPD3-203ENST00000563226 TMEM204Q9BSN7 226 aa15.63■□□□□ 0.09
SMPD3-203ENST00000563226 SNAPINO95295 136 aa15.62■□□□□ 0.09
SMPD3-203ENST00000563226 MYOD1P15172 320 aa15.62■□□□□ 0.09
SMPD3-203ENST00000563226 DLX6P56179 175 aa15.62■□□□□ 0.09
SMPD3-203ENST00000563226 TLE4Q04727 773 aa15.62■□□□□ 0.09
SMPD3-203ENST00000563226 ZNF833PQ6ZTB9 187 aa15.62■□□□□ 0.09
SMPD3-203ENST00000563226 CBLN2Q8IUK8 224 aa15.62■□□□□ 0.09
SMPD3-203ENST00000563226 OR52E5Q8NH55 327 aa15.62■□□□□ 0.09
SMPD3-203ENST00000563226 PBDC1Q9BVG4 233 aa15.62■□□□□ 0.09
SMPD3-203ENST00000563226 MRPL20Q9BYC9 149 aaKnown RBP15.62■□□□□ 0.09
SMPD3-203ENST00000563226 TPRP12270 2363 aaKnown RBP15.62■□□□□ 0.09
SMPD3-203ENST00000563226 A0A1B0GW64 132 aa15.61■□□□□ 0.09
SMPD3-203ENST00000563226 C15orf61A6NNL5 157 aa15.61■□□□□ 0.09
SMPD3-203ENST00000563226 EIF3GO75821 320 aaKnown RBP eCLIP15.61■□□□□ 0.09
SMPD3-203ENST00000563226 HAGHQ16775 308 aa15.61■□□□□ 0.09
SMPD3-203ENST00000563226 PDLIM3Q53GG5 364 aaPredicted RBP15.61■□□□□ 0.09
SMPD3-203ENST00000563226 PINX1Q96BK5 328 aaKnown RBP15.61■□□□□ 0.09
SMPD3-203ENST00000563226 SLC35D1Q9NTN3 355 aa15.61■□□□□ 0.09
SMPD3-203ENST00000563226 TCF19Q9Y242 345 aa15.61■□□□□ 0.09
SMPD3-203ENST00000563226 HIVEP3Q5T1R4 2406 aa15.61■□□□□ 0.09
SMPD3-203ENST00000563226 RBFOX3A6NFN3 312 aa15.61■□□□□ 0.09
SMPD3-203ENST00000563226 GNB2P62879 340 aa15.61■□□□□ 0.09
SMPD3-203ENST00000563226 ATP6V1FQ16864 119 aa15.61■□□□□ 0.09
SMPD3-203ENST00000563226 TMEM170AQ8WVE7 144 aa15.61■□□□□ 0.09
SMPD3-203ENST00000563226 KIAA1456Q9P272 454 aa15.61■□□□□ 0.09
SMPD3-203ENST00000563226 KPTNQ9Y664 436 aa15.61■□□□□ 0.09
SMPD3-203ENST00000563226 PIEZO1Q92508 2521 aa15.6■□□□□ 0.09
SMPD3-203ENST00000563226 SRRM4A7MD48 611 aaKnown RBP15.6■□□□□ 0.09
SMPD3-203ENST00000563226 IGKV1D-33P01593 117 aa15.6■□□□□ 0.09
SMPD3-203ENST00000563226 IGKV1-33P01594 117 aa15.6■□□□□ 0.09
SMPD3-203ENST00000563226 FGF7P21781 194 aa15.6■□□□□ 0.09
SMPD3-203ENST00000563226 REG1BP48304 166 aa15.6■□□□□ 0.09
SMPD3-203ENST00000563226 DIAPH2-AS1Q14236 149 aa15.6■□□□□ 0.09
SMPD3-203ENST00000563226 VWC2Q2TAL6 325 aa15.6■□□□□ 0.09
SMPD3-203ENST00000563226 TMEM155Q4W5P6 130 aa15.6■□□□□ 0.09
SMPD3-203ENST00000563226 ZNF429Q86V71 674 aa15.6■□□□□ 0.09
SMPD3-203ENST00000563226 OR13D1Q8NGV5 346 aa15.6■□□□□ 0.09
SMPD3-203ENST00000563226 RCC1LQ96I51 464 aaKnown RBP15.6■□□□□ 0.09
SMPD3-203ENST00000563226 AIFM2Q9BRQ8 373 aa15.6■□□□□ 0.09
SMPD3-203ENST00000563226 HIPK2Q9H2X6 1198 aa15.6■□□□□ 0.09
SMPD3-203ENST00000563226 HEYLQ9NQ87 328 aaPredicted RBP15.6■□□□□ 0.09
SMPD3-203ENST00000563226 BTBD17A6NE02 478 aa15.59■□□□□ 0.09
SMPD3-203ENST00000563226 RRHO14718 337 aa15.59■□□□□ 0.09
SMPD3-203ENST00000563226 LY6HO94772 140 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms