RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 TMEM252Q8N6L7 170 aa11.24□□□□□ -0.61
TPM1-215ENST00000558868 ZNF525Q8N782 197 aa11.24□□□□□ -0.61
TPM1-215ENST00000558868 OR5AN1Q8NGI8 311 aa11.24□□□□□ -0.61
TPM1-215ENST00000558868 OSR1Q8TAX0 266 aaPredicted RBP11.24□□□□□ -0.61
TPM1-215ENST00000558868 LRRC20Q8TCA0 184 aa11.24□□□□□ -0.61
TPM1-215ENST00000558868 CLCC1Q96S66 551 aa11.24□□□□□ -0.61
TPM1-215ENST00000558868 PIMREGQ9BSJ6 248 aa11.24□□□□□ -0.61
TPM1-215ENST00000558868 NARFLQ9H6Q4 476 aa11.24□□□□□ -0.61
TPM1-215ENST00000558868 FAM24AA6NFZ4 105 aa11.23□□□□□ -0.61
TPM1-215ENST00000558868 A8MXK9 166 aa11.23□□□□□ -0.61
TPM1-215ENST00000558868 ATP6V1G1O75348 118 aa11.23□□□□□ -0.61
TPM1-215ENST00000558868 NXPH3O95157 252 aa11.23□□□□□ -0.61
TPM1-215ENST00000558868 HLA-DRB5Q30154 266 aa11.23□□□□□ -0.61
TPM1-215ENST00000558868 PDPNQ86YL7 162 aa11.23□□□□□ -0.61
TPM1-215ENST00000558868 OR52E5Q8NH55 327 aa11.23□□□□□ -0.61
TPM1-215ENST00000558868 ST6GALNAC6Q969X2 333 aa11.23□□□□□ -0.61
TPM1-215ENST00000558868 MARVELD3Q96A59 401 aa11.23□□□□□ -0.61
TPM1-215ENST00000558868 RHOVQ96L33 236 aa11.23□□□□□ -0.61
TPM1-215ENST00000558868 NABP2Q9BQ15 211 aa11.23□□□□□ -0.61
TPM1-215ENST00000558868 MRPL20Q9BYC9 149 aaKnown RBP11.23□□□□□ -0.61
TPM1-215ENST00000558868 SLC25A32Q9H2D1 315 aa11.23□□□□□ -0.61
TPM1-215ENST00000558868 RBKSQ9H477 322 aa11.23□□□□□ -0.61
TPM1-215ENST00000558868 TMEM140Q9NV12 185 aa11.23□□□□□ -0.61
TPM1-215ENST00000558868 PSENENQ9NZ42 101 aa11.23□□□□□ -0.61
TPM1-215ENST00000558868 DOCK11Q5JSL3 2073 aa11.23□□□□□ -0.61
TPM1-215ENST00000558868 USF3Q68DE3 2245 aa11.23□□□□□ -0.61
TPM1-215ENST00000558868 IGSF23A1L1A6 192 aa11.22□□□□□ -0.61
TPM1-215ENST00000558868 H0YJW9 148 aa11.22□□□□□ -0.61
TPM1-215ENST00000558868 H7C2Y5 167 aa11.22□□□□□ -0.61
TPM1-215ENST00000558868 FOXH1O75593 365 aa11.22□□□□□ -0.61
TPM1-215ENST00000558868 IGLV1-47P01700 117 aa11.22□□□□□ -0.61
TPM1-215ENST00000558868 PRTN3P24158 256 aa11.22□□□□□ -0.61
TPM1-215ENST00000558868 SULT1A1P50225 295 aa11.22□□□□□ -0.61
TPM1-215ENST00000558868 PAX9P55771 341 aa11.22□□□□□ -0.61
TPM1-215ENST00000558868 DSCR9P59020 149 aa11.22□□□□□ -0.61
TPM1-215ENST00000558868 SPCS3P61009 180 aa11.22□□□□□ -0.61
TPM1-215ENST00000558868 ZNF266Q14584 549 aa11.22□□□□□ -0.61
TPM1-215ENST00000558868 TMEM177Q53S58 311 aa11.22□□□□□ -0.61
TPM1-215ENST00000558868 CLEC2AQ6UVW9 174 aa11.22□□□□□ -0.61
TPM1-215ENST00000558868 UBAC2Q8NBM4 344 aa11.22□□□□□ -0.61
TPM1-215ENST00000558868 FAM168AQ92567 244 aa11.22□□□□□ -0.61
TPM1-215ENST00000558868 LHX4Q969G2 390 aa11.22□□□□□ -0.61
TPM1-215ENST00000558868 BPESC1Q9GZL8 116 aa11.22□□□□□ -0.61
TPM1-215ENST00000558868 WASHC3Q9Y3C0 194 aa11.22□□□□□ -0.61
TPM1-215ENST00000558868 KPTNQ9Y664 436 aa11.22□□□□□ -0.61
TPM1-215ENST00000558868 ITPR2Q14571 2701 aa11.21□□□□□ -0.61
TPM1-215ENST00000558868 CEBPZOSA8MTT3 80 aa11.21□□□□□ -0.61
TPM1-215ENST00000558868 BUB1B-PAK6H3BSN5 160 aa11.21□□□□□ -0.61
TPM1-215ENST00000558868 SHOXO15266 292 aa11.21□□□□□ -0.61
TPM1-215ENST00000558868 DFFBO76075 338 aa11.21□□□□□ -0.61
TPM1-215ENST00000558868 TMEM50AO95807 157 aa11.21□□□□□ -0.61
TPM1-215ENST00000558868 IFNA17P01571 189 aa11.21□□□□□ -0.61
TPM1-215ENST00000558868 OR9G9P0C7N8 305 aa11.21□□□□□ -0.61
TPM1-215ENST00000558868 IAPPP10997 89 aa11.21□□□□□ -0.61
TPM1-215ENST00000558868 PAX1P15863 534 aa11.21□□□□□ -0.61
TPM1-215ENST00000558868 ATP5J2P56134 94 aa11.21□□□□□ -0.61
TPM1-215ENST00000558868 ARF6P62330 175 aa11.21□□□□□ -0.61
TPM1-215ENST00000558868 HBG1P69891 147 aa11.21□□□□□ -0.61
TPM1-215ENST00000558868 HBG2P69892 147 aa11.21□□□□□ -0.61
TPM1-215ENST00000558868 RPP30P78346 268 aaKnown RBP11.21□□□□□ -0.61
TPM1-215ENST00000558868 NHLH2Q02577 135 aa11.21□□□□□ -0.61
TPM1-215ENST00000558868 PDLIM3Q53GG5 364 aaPredicted RBP11.21□□□□□ -0.61
TPM1-215ENST00000558868 RPL7L1Q6DKI1 246 aaKnown RBP11.21□□□□□ -0.61
TPM1-215ENST00000558868 SSX9Q7RTT3 188 aa11.21□□□□□ -0.61
TPM1-215ENST00000558868 ZNF429Q86V71 674 aa11.21□□□□□ -0.61
TPM1-215ENST00000558868 PDZD9Q8IXQ8 264 aa11.21□□□□□ -0.61
TPM1-215ENST00000558868 OR11H6Q8NGC7 330 aa11.21□□□□□ -0.61
TPM1-215ENST00000558868 OR4C13Q8NGP0 309 aa11.21□□□□□ -0.61
TPM1-215ENST00000558868 OR1S2Q8NGQ3 325 aa11.21□□□□□ -0.61
TPM1-215ENST00000558868 CLDND2Q8NHS1 167 aa11.21□□□□□ -0.61
TPM1-215ENST00000558868 FLYWCH2Q96CP2 140 aaKnown RBP11.21□□□□□ -0.61
TPM1-215ENST00000558868 SMIM3Q9BZL3 60 aa11.21□□□□□ -0.61
TPM1-215ENST00000558868 FKBP11Q9NYL4 201 aa11.21□□□□□ -0.61
TPM1-215ENST00000558868 ZNRD1Q9P1U0 126 aa11.21□□□□□ -0.61
TPM1-215ENST00000558868 NUP50Q9UKX7 468 aa11.21□□□□□ -0.61
TPM1-215ENST00000558868 PRNDQ9UKY0 176 aa11.21□□□□□ -0.61
TPM1-215ENST00000558868 LRRK2Q5S007 2527 aa11.21□□□□□ -0.61
TPM1-215ENST00000558868 MALRD1Q5VYJ5 2156 aa11.21□□□□□ -0.62
TPM1-215ENST00000558868 LINC00862A6NCI5 91 aa11.2□□□□□ -0.62
TPM1-215ENST00000558868 COX7A1P24310 79 aa11.2□□□□□ -0.62
TPM1-215ENST00000558868 CEACAM3P40198 252 aa11.2□□□□□ -0.62
TPM1-215ENST00000558868 LMO4P61968 165 aa11.2□□□□□ -0.62
TPM1-215ENST00000558868 RELBQ01201 579 aa11.2□□□□□ -0.62
TPM1-215ENST00000558868 OR4A47Q6IF82 309 aa11.2□□□□□ -0.62
TPM1-215ENST00000558868 SLC7A5P1Q8MH63 180 aa11.2□□□□□ -0.62
TPM1-215ENST00000558868 PNKDQ8N490 385 aa11.2□□□□□ -0.62
TPM1-215ENST00000558868 Q8N7P7 452 aa11.2□□□□□ -0.62
TPM1-215ENST00000558868 OR4A5Q8NH83 315 aa11.2□□□□□ -0.62
TPM1-215ENST00000558868 VSTM2AQ8TAG5 236 aa11.2□□□□□ -0.62
TPM1-215ENST00000558868 DTD1Q8TEA8 209 aa11.2□□□□□ -0.62
TPM1-215ENST00000558868 C10orf105Q8TEF2 133 aa11.2□□□□□ -0.62
TPM1-215ENST00000558868 TSNAXQ99598 290 aaKnown RBP11.2□□□□□ -0.62
TPM1-215ENST00000558868 QTRT1Q9BXR0 403 aaKnown RBP11.2□□□□□ -0.62
TPM1-215ENST00000558868 ARV1Q9H2C2 271 aa11.2□□□□□ -0.62
TPM1-215ENST00000558868 UNKLQ9H9P5 680 aaKnown RBP11.2□□□□□ -0.62
TPM1-215ENST00000558868 BET1LQ9NYM9 111 aa11.2□□□□□ -0.62
TPM1-215ENST00000558868 FOXA2Q9Y261 457 aaPredicted RBP11.2□□□□□ -0.62
TPM1-215ENST00000558868 STRAPQ9Y3F4 350 aaKnown RBP11.2□□□□□ -0.62
TPM1-215ENST00000558868 SETD2Q9BYW2 2564 aaPredicted RBP11.2□□□□□ -0.62
TPM1-215ENST00000558868 ARID1AO14497 2285 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms