RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 PPP1R1AQ13522 171 aa9.96□□□□□ -0.82
SHMT2-221ENST00000555773 TMEM187Q14656 261 aa9.96□□□□□ -0.82
SHMT2-221ENST00000555773 MMDQ15546 238 aa9.96□□□□□ -0.82
SHMT2-221ENST00000555773 LY6EQ16553 131 aa9.96□□□□□ -0.82
SHMT2-221ENST00000555773 POU2AF1Q16633 256 aa9.96□□□□□ -0.82
SHMT2-221ENST00000555773 TRIM16LQ309B1 348 aa9.96□□□□□ -0.82
SHMT2-221ENST00000555773 VMA21Q3ZAQ7 101 aa9.96□□□□□ -0.82
SHMT2-221ENST00000555773 LYG2Q86SG7 212 aa9.96□□□□□ -0.82
SHMT2-221ENST00000555773 LGI3Q8N145 548 aa9.96□□□□□ -0.82
SHMT2-221ENST00000555773 TEX45Q8NA69 505 aa9.96□□□□□ -0.82
SHMT2-221ENST00000555773 VSTM2AQ8TAG5 236 aa9.96□□□□□ -0.82
SHMT2-221ENST00000555773 RITA1Q96K30 269 aa9.96□□□□□ -0.82
SHMT2-221ENST00000555773 HARBI1Q96MB7 349 aa9.96□□□□□ -0.82
SHMT2-221ENST00000555773 GPN1Q9HCN4 374 aaPredicted RBP9.96□□□□□ -0.82
SHMT2-221ENST00000555773 KIAA1456Q9P272 454 aa9.96□□□□□ -0.82
SHMT2-221ENST00000555773 A0A0B4J2A0 478 aa9.95□□□□□ -0.82
SHMT2-221ENST00000555773 DNAJC9-AS1A6NH13 148 aa9.95□□□□□ -0.82
SHMT2-221ENST00000555773 NCBP2LA6PVI3 153 aaKnown RBP9.95□□□□□ -0.82
SHMT2-221ENST00000555773 SRRM4A7MD48 611 aaKnown RBP9.95□□□□□ -0.82
SHMT2-221ENST00000555773 S1PR2O95136 353 aa9.95□□□□□ -0.82
SHMT2-221ENST00000555773 NDUFA3O95167 84 aa9.95□□□□□ -0.82
SHMT2-221ENST00000555773 IGLV2-23P01705 113 aa9.95□□□□□ -0.82
SHMT2-221ENST00000555773 HLA-AP01891 365 aaKnown RBP9.95□□□□□ -0.82
SHMT2-221ENST00000555773 SPNP16150 400 aa9.95□□□□□ -0.82
SHMT2-221ENST00000555773 F2RL1P55085 397 aa9.95□□□□□ -0.82
SHMT2-221ENST00000555773 RAB25P57735 213 aa9.95□□□□□ -0.82
SHMT2-221ENST00000555773 RPL15P61313 204 aaKnown RBP9.95□□□□□ -0.82
SHMT2-221ENST00000555773 ERVK-16P61578 105 aa9.95□□□□□ -0.82
SHMT2-221ENST00000555773 PSG5Q15238 335 aa9.95□□□□□ -0.82
SHMT2-221ENST00000555773 ZNF695Q8IW36 515 aa9.95□□□□□ -0.82
SHMT2-221ENST00000555773 LRTM2Q8N967 370 aa9.95□□□□□ -0.82
SHMT2-221ENST00000555773 COQ8AQ8NI60 647 aa9.95□□□□□ -0.82
SHMT2-221ENST00000555773 ZNF431Q8TF32 576 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-221ENST00000555773 CHPT1Q8WUD6 406 aa9.95□□□□□ -0.82
SHMT2-221ENST00000555773 RBPMSQ93062 196 aaKnown RBP9.95□□□□□ -0.82
SHMT2-221ENST00000555773 RHOVQ96L33 236 aa9.95□□□□□ -0.82
SHMT2-221ENST00000555773 SLC25A33Q9BSK2 321 aa9.95□□□□□ -0.82
SHMT2-221ENST00000555773 CHIAQ9BZP6 476 aa9.95□□□□□ -0.82
SHMT2-221ENST00000555773 BEX1Q9HBH7 125 aa9.95□□□□□ -0.82
SHMT2-221ENST00000555773 SHPKQ9UHJ6 478 aa9.95□□□□□ -0.82
SHMT2-221ENST00000555773 MOB4Q9Y3A3 225 aa9.95□□□□□ -0.82
SHMT2-221ENST00000555773 SNRPGP15A8MWD9 76 aa9.94□□□□□ -0.82
SHMT2-221ENST00000555773 RRHO14718 337 aa9.94□□□□□ -0.82
SHMT2-221ENST00000555773 RNASE1P07998 156 aaKnown RBP9.94□□□□□ -0.82
SHMT2-221ENST00000555773 C5orf64Q2M2E5 130 aa9.94□□□□□ -0.82
SHMT2-221ENST00000555773 TMEM219Q86XT9 240 aa9.94□□□□□ -0.82
SHMT2-221ENST00000555773 LURAP1LQ8IV03 231 aa9.94□□□□□ -0.82
SHMT2-221ENST00000555773 SELENOHQ8IZQ5 122 aaKnown RBP9.94□□□□□ -0.82
SHMT2-221ENST00000555773 OR4A5Q8NH83 315 aa9.94□□□□□ -0.82
SHMT2-221ENST00000555773 CASTOR1Q8WTX7 329 aa9.94□□□□□ -0.82
SHMT2-221ENST00000555773 MITD1Q8WV92 249 aa9.94□□□□□ -0.82
SHMT2-221ENST00000555773 R3HDM4Q96D70 268 aa9.94□□□□□ -0.82
SHMT2-221ENST00000555773 SEC22AQ96IW7 307 aa9.94□□□□□ -0.82
SHMT2-221ENST00000555773 RASL11BQ9BPW5 248 aa9.94□□□□□ -0.82
SHMT2-221ENST00000555773 ESM1Q9NQ30 184 aa9.94□□□□□ -0.82
SHMT2-221ENST00000555773 TNFRSF19Q9NS68 423 aa9.94□□□□□ -0.82
SHMT2-221ENST00000555773 NIPBLQ6KC79 2804 aaeCLIP9.93□□□□□ -0.82
SHMT2-221ENST00000555773 JMJD1CQ15652 2540 aa9.93□□□□□ -0.82
SHMT2-221ENST00000555773 DUXBA0A1W2PPF3 345 aa9.93□□□□□ -0.82
SHMT2-221ENST00000555773 MARCH11A6NNE9 402 aa9.93□□□□□ -0.82
SHMT2-221ENST00000555773 TRIM77I1YAP6 450 aa9.93□□□□□ -0.82
SHMT2-221ENST00000555773 GPR137BO60478 399 aa9.93□□□□□ -0.82
SHMT2-221ENST00000555773 OR2A4O95047 310 aa9.93□□□□□ -0.82
SHMT2-221ENST00000555773 KRASP01116 189 aa9.93□□□□□ -0.82
SHMT2-221ENST00000555773 IGKV1-39P01597 117 aa9.93□□□□□ -0.82
SHMT2-221ENST00000555773 IGKV1D-39P04432 117 aa9.93□□□□□ -0.82
SHMT2-221ENST00000555773 CRYGBP07316 175 aa9.93□□□□□ -0.82
SHMT2-221ENST00000555773 IL6RP08887 468 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-221ENST00000555773 FGF2P09038 288 aa9.93□□□□□ -0.82
SHMT2-221ENST00000555773 UBA52P62987 128 aaKnown RBP9.93□□□□□ -0.82
SHMT2-221ENST00000555773 ANKRD55Q3KP44 614 aa9.93□□□□□ -0.82
SHMT2-221ENST00000555773 FBLN7Q53RD9 439 aa9.93□□□□□ -0.82
SHMT2-221ENST00000555773 TMEM268Q5VZI3 342 aa9.93□□□□□ -0.82
SHMT2-221ENST00000555773 LIN54Q6MZP7 749 aa9.93□□□□□ -0.82
SHMT2-221ENST00000555773 FAM219AQ8IW50 185 aa9.93□□□□□ -0.82
SHMT2-221ENST00000555773 PUSL1Q8N0Z8 303 aaKnown RBP9.93□□□□□ -0.82
SHMT2-221ENST00000555773 FAM71E2Q8N5Q1 922 aa9.93□□□□□ -0.82
SHMT2-221ENST00000555773 Q8N9W7 124 aa9.93□□□□□ -0.82
SHMT2-221ENST00000555773 DMBX1Q8NFW5 382 aa9.93□□□□□ -0.82
SHMT2-221ENST00000555773 RBMXL1Q96E39 390 aaKnown RBP9.93□□□□□ -0.82
SHMT2-221ENST00000555773 RRNAD1Q96FB5 475 aaKnown RBP9.93□□□□□ -0.82
SHMT2-221ENST00000555773 OR2A7Q96R45 310 aa9.93□□□□□ -0.82
SHMT2-221ENST00000555773 PHB2Q99623 299 aa9.93□□□□□ -0.82
SHMT2-221ENST00000555773 BET1LQ9NYM9 111 aa9.93□□□□□ -0.82
SHMT2-221ENST00000555773 METTL1Q9UBP6 276 aaKnown RBP9.93□□□□□ -0.82
SHMT2-221ENST00000555773 SIGLEC9Q9Y336 463 aa9.93□□□□□ -0.82
SHMT2-221ENST00000555773 SLC25A17O43808 307 aa9.92□□□□□ -0.82
SHMT2-221ENST00000555773 CREBL2O60519 120 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-221ENST00000555773 CRYBA1P05813 215 aa9.92□□□□□ -0.82
SHMT2-221ENST00000555773 SAA1P0DJI8 122 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-221ENST00000555773 VDAC1P21796 283 aa9.92□□□□□ -0.82
SHMT2-221ENST00000555773 CNTFRP26992 372 aa9.92□□□□□ -0.82
SHMT2-221ENST00000555773 G6PCP35575 357 aa9.92□□□□□ -0.82
SHMT2-221ENST00000555773 PLGLAQ15195 96 aa9.92□□□□□ -0.82
SHMT2-221ENST00000555773 H2BFWTQ7Z2G1 175 aa9.92□□□□□ -0.82
SHMT2-221ENST00000555773 PPP1R27Q86WC6 154 aa9.92□□□□□ -0.82
SHMT2-221ENST00000555773 VKORC1L1Q8N0U8 176 aa9.92□□□□□ -0.82
SHMT2-221ENST00000555773 C12orf45Q8N5I9 185 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-221ENST00000555773 C5orf56Q8N8D9 126 aa9.92□□□□□ -0.82
SHMT2-221ENST00000555773 LHFPL5Q8TAF8 219 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms