RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 FAM106CPP0CH98 169 aa9.63□□□□□ -0.87
HDAC7-226ENST00000547259 ANXA7P20073 488 aaKnown RBP9.63□□□□□ -0.87
HDAC7-226ENST00000547259 VAMP1P23763 118 aa9.63□□□□□ -0.87
HDAC7-226ENST00000547259 RAB25P57735 213 aa9.63□□□□□ -0.87
HDAC7-226ENST00000547259 LY6EQ16553 131 aa9.63□□□□□ -0.87
HDAC7-226ENST00000547259 TMEM128Q5BJH2 165 aa9.63□□□□□ -0.87
HDAC7-226ENST00000547259 SLC25A42Q86VD7 318 aa9.63□□□□□ -0.87
HDAC7-226ENST00000547259 TCTEX1D1Q8N7M0 179 aa9.63□□□□□ -0.87
HDAC7-226ENST00000547259 DUSP18Q8NEJ0 188 aa9.63□□□□□ -0.87
HDAC7-226ENST00000547259 RBMXL1Q96E39 390 aaKnown RBP9.63□□□□□ -0.87
HDAC7-226ENST00000547259 TCF19Q9Y242 345 aa9.63□□□□□ -0.87
HDAC7-226ENST00000547259 FAM90A9PA6NNJ1 464 aa9.62□□□□□ -0.87
HDAC7-226ENST00000547259 SHOXO15266 292 aa9.62□□□□□ -0.87
HDAC7-226ENST00000547259 RAMP3O60896 148 aa9.62□□□□□ -0.87
HDAC7-226ENST00000547259 PEX14O75381 377 aa9.62□□□□□ -0.87
HDAC7-226ENST00000547259 B3GALNT1O75752 331 aa9.62□□□□□ -0.87
HDAC7-226ENST00000547259 TSPAN15O95858 294 aa9.62□□□□□ -0.87
HDAC7-226ENST00000547259 MOSP00540 346 aa9.62□□□□□ -0.87
HDAC7-226ENST00000547259 OPN1MWP04001 364 aa9.62□□□□□ -0.87
HDAC7-226ENST00000547259 OR5AC1P0C628 307 aa9.62□□□□□ -0.87
HDAC7-226ENST00000547259 OPN1MW2P0DN77 364 aa9.62□□□□□ -0.87
HDAC7-226ENST00000547259 OPN1MW3P0DN78 364 aa9.62□□□□□ -0.87
HDAC7-226ENST00000547259 ANXA3P12429 323 aa9.62□□□□□ -0.87
HDAC7-226ENST00000547259 UBE2MP61081 183 aaKnown RBP9.62□□□□□ -0.87
HDAC7-226ENST00000547259 PPP1R1AQ13522 171 aa9.62□□□□□ -0.87
HDAC7-226ENST00000547259 HNF4GQ14541 408 aa9.62□□□□□ -0.87
HDAC7-226ENST00000547259 TRIM16LQ309B1 348 aa9.62□□□□□ -0.87
HDAC7-226ENST00000547259 SP6Q3SY56 376 aa9.62□□□□□ -0.87
HDAC7-226ENST00000547259 C4orf46Q504U0 113 aa9.62□□□□□ -0.87
HDAC7-226ENST00000547259 CCBE1Q6UXH8 406 aaPredicted RBP9.62□□□□□ -0.87
HDAC7-226ENST00000547259 THNSL2Q86YJ6 484 aa9.62□□□□□ -0.87
HDAC7-226ENST00000547259 OR4C13Q8NGP0 309 aa9.62□□□□□ -0.87
HDAC7-226ENST00000547259 CD300LFQ8TDQ1 290 aa9.62□□□□□ -0.87
HDAC7-226ENST00000547259 FLYWCH2Q96CP2 140 aaKnown RBP9.62□□□□□ -0.87
HDAC7-226ENST00000547259 EAF1Q96JC9 268 aaPredicted RBP9.62□□□□□ -0.87
HDAC7-226ENST00000547259 HARBI1Q96MB7 349 aa9.62□□□□□ -0.87
HDAC7-226ENST00000547259 TP53RKQ96S44 253 aa9.62□□□□□ -0.87
HDAC7-226ENST00000547259 RANBP3Q9H6Z4 567 aaPredicted RBP9.62□□□□□ -0.87
HDAC7-226ENST00000547259 PITPNC1Q9UKF7 332 aa9.62□□□□□ -0.87
HDAC7-226ENST00000547259 KCNIP3Q9Y2W7 256 aa9.62□□□□□ -0.87
HDAC7-226ENST00000547259 INMT-MINDY4F8WBC2 141 aa9.61□□□□□ -0.87
HDAC7-226ENST00000547259 RBFOX2O43251 390 aaKnown RBP eCLIP9.61□□□□□ -0.87
HDAC7-226ENST00000547259 S1PR2O95136 353 aa9.61□□□□□ -0.87
HDAC7-226ENST00000547259 HPRT1P00492 218 aa9.61□□□□□ -0.87
HDAC7-226ENST00000547259 HLA-AP01891 365 aaKnown RBP9.61□□□□□ -0.87
HDAC7-226ENST00000547259 IGKV1-16P04430 117 aa9.61□□□□□ -0.87
HDAC7-226ENST00000547259 SERPINE2P07093 398 aa9.61□□□□□ -0.87
HDAC7-226ENST00000547259 OR4E1P0C645 316 aa9.61□□□□□ -0.87
HDAC7-226ENST00000547259 VSIG10L2P0DP72 767 aa9.61□□□□□ -0.87
HDAC7-226ENST00000547259 LPAR6P43657 344 aa9.61□□□□□ -0.87
HDAC7-226ENST00000547259 RPS16P62249 146 aaKnown RBP9.61□□□□□ -0.87
HDAC7-226ENST00000547259 SUPT4H1P63272 117 aaKnown RBP9.61□□□□□ -0.87
HDAC7-226ENST00000547259 DHODHQ02127 395 aa9.61□□□□□ -0.87
HDAC7-226ENST00000547259 EBI3Q14213 229 aa9.61□□□□□ -0.87
HDAC7-226ENST00000547259 TMEM177Q53S58 311 aa9.61□□□□□ -0.87
HDAC7-226ENST00000547259 LIAT1Q6ZQX7 453 aa9.61□□□□□ -0.87
HDAC7-226ENST00000547259 TMEM219Q86XT9 240 aa9.61□□□□□ -0.87
HDAC7-226ENST00000547259 C1QL4Q86Z23 238 aa9.61□□□□□ -0.87
HDAC7-226ENST00000547259 OR2T6Q8NHC8 308 aa9.61□□□□□ -0.87
HDAC7-226ENST00000547259 OSR1Q8TAX0 266 aaPredicted RBP9.61□□□□□ -0.87
HDAC7-226ENST00000547259 PIFOQ8TCI5 191 aa9.61□□□□□ -0.87
HDAC7-226ENST00000547259 CASTOR1Q8WTX7 329 aa9.61□□□□□ -0.87
HDAC7-226ENST00000547259 SLC25A33Q9BSK2 321 aa9.61□□□□□ -0.87
HDAC7-226ENST00000547259 FAM212BQ9NTI7 297 aaPredicted RBP9.61□□□□□ -0.87
HDAC7-226ENST00000547259 A6NDX4 124 aa9.6□□□□□ -0.87
HDAC7-226ENST00000547259 NCBP2LA6PVI3 153 aaKnown RBP9.6□□□□□ -0.87
HDAC7-226ENST00000547259 SFT2D2O95562 160 aa9.6□□□□□ -0.87
HDAC7-226ENST00000547259 DHFRP00374 187 aa9.6□□□□□ -0.87
HDAC7-226ENST00000547259 RPA2P15927 270 aa9.6□□□□□ -0.87
HDAC7-226ENST00000547259 UCP1P25874 307 aa9.6□□□□□ -0.87
HDAC7-226ENST00000547259 MECP2P51608 486 aaKnown RBP9.6□□□□□ -0.87
HDAC7-226ENST00000547259 BRWD1-AS2P59051 145 aa9.6□□□□□ -0.87
HDAC7-226ENST00000547259 ERVK-16P61578 105 aa9.6□□□□□ -0.87
HDAC7-226ENST00000547259 SRPXP78539 464 aa9.6□□□□□ -0.87
HDAC7-226ENST00000547259 MMDQ15546 238 aa9.6□□□□□ -0.87
HDAC7-226ENST00000547259 KPRPQ5T749 579 aaPredicted RBP9.6□□□□□ -0.87
HDAC7-226ENST00000547259 LYG2Q86SG7 212 aa9.6□□□□□ -0.87
HDAC7-226ENST00000547259 MINDY2Q8NBR6 621 aa9.6□□□□□ -0.87
HDAC7-226ENST00000547259 GALNT14Q96FL9 552 aa9.6□□□□□ -0.87
HDAC7-226ENST00000547259 TSNAXQ99598 290 aaKnown RBP9.6□□□□□ -0.87
HDAC7-226ENST00000547259 SEC22CQ9BRL7 303 aa9.6□□□□□ -0.87
HDAC7-226ENST00000547259 MARVELD1Q9BSK0 173 aa9.6□□□□□ -0.87
HDAC7-226ENST00000547259 TMEM222Q9H0R3 208 aa9.6□□□□□ -0.87
HDAC7-226ENST00000547259 ALX4Q9H161 411 aaPredicted RBP9.6□□□□□ -0.87
HDAC7-226ENST00000547259 PLEKHA2Q9HB19 425 aa9.6□□□□□ -0.87
HDAC7-226ENST00000547259 PRR13Q9NZ81 148 aa9.6□□□□□ -0.87
HDAC7-226ENST00000547259 COMMD9Q9P000 198 aa9.6□□□□□ -0.87
HDAC7-226ENST00000547259 KIAA1456Q9P272 454 aa9.6□□□□□ -0.87
HDAC7-226ENST00000547259 C9orf170A2RU37 121 aa9.59□□□□□ -0.87
HDAC7-226ENST00000547259 NBR2O15453 112 aa9.59□□□□□ -0.87
HDAC7-226ENST00000547259 PRAF2O60831 178 aa9.59□□□□□ -0.87
HDAC7-226ENST00000547259 OR2F2O95006 317 aa9.59□□□□□ -0.87
HDAC7-226ENST00000547259 HRASP01112 189 aa9.59□□□□□ -0.87
HDAC7-226ENST00000547259 NQO2P16083 231 aa9.59□□□□□ -0.87
HDAC7-226ENST00000547259 CNTFRP26992 372 aa9.59□□□□□ -0.87
HDAC7-226ENST00000547259 DHRS2Q13268 280 aa9.59□□□□□ -0.87
HDAC7-226ENST00000547259 TMEM187Q14656 261 aa9.59□□□□□ -0.87
HDAC7-226ENST00000547259 OXA1LQ15070 435 aa9.59□□□□□ -0.87
HDAC7-226ENST00000547259 BEAN1Q3B7T3 259 aa9.59□□□□□ -0.87
HDAC7-226ENST00000547259 VMA21Q3ZAQ7 101 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms