RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 PRELID3BQ9Y3B1 194 aa10.99□□□□□ -0.65
COL2A1-209ENST00000546974 TMEM235A6NFC5 223 aa10.98□□□□□ -0.65
COL2A1-209ENST00000546974 A8MZ25 164 aa10.98□□□□□ -0.65
COL2A1-209ENST00000546974 H0Y980 276 aa10.98□□□□□ -0.65
COL2A1-209ENST00000546974 MPPED1O15442 326 aa10.98□□□□□ -0.65
COL2A1-209ENST00000546974 FCGR3BO75015 233 aa10.98□□□□□ -0.65
COL2A1-209ENST00000546974 ATP6V1G2O95670 118 aa10.98□□□□□ -0.65
COL2A1-209ENST00000546974 SAA1P0DJI8 122 aaPredicted RBP10.98□□□□□ -0.65
COL2A1-209ENST00000546974 SYNJ2BPP57105 145 aa10.98□□□□□ -0.65
COL2A1-209ENST00000546974 GNG2P59768 71 aa10.98□□□□□ -0.65
COL2A1-209ENST00000546974 DEFA5Q01523 94 aa10.98□□□□□ -0.65
COL2A1-209ENST00000546974 SFXN4Q6P4A7 337 aa10.98□□□□□ -0.65
COL2A1-209ENST00000546974 KCTD9Q7L273 389 aa10.98□□□□□ -0.65
COL2A1-209ENST00000546974 MMD2Q8IY49 270 aa10.98□□□□□ -0.65
COL2A1-209ENST00000546974 NUDCD2Q8WVJ2 157 aa10.98□□□□□ -0.65
COL2A1-209ENST00000546974 ACOT12Q8WYK0 555 aa10.98□□□□□ -0.65
COL2A1-209ENST00000546974 SPIN2AQ99865 258 aa10.98□□□□□ -0.65
COL2A1-209ENST00000546974 SPIN2BQ9BPZ2 258 aa10.98□□□□□ -0.65
COL2A1-209ENST00000546974 DCUN1D5Q9BTE7 237 aa10.98□□□□□ -0.65
COL2A1-209ENST00000546974 SIGLEC8Q9NYZ4 499 aa10.98□□□□□ -0.65
COL2A1-209ENST00000546974 ANXA10Q9UJ72 324 aa10.98□□□□□ -0.65
COL2A1-209ENST00000546974 MRPS7Q9Y2R9 242 aaKnown RBP10.98□□□□□ -0.65
COL2A1-209ENST00000546974 RRP15Q9Y3B9 282 aaKnown RBP10.98□□□□□ -0.65
COL2A1-209ENST00000546974 TRBV9A0A0B4J1U6 114 aa10.97□□□□□ -0.65
COL2A1-209ENST00000546974 FAM223BA6NKX1 122 aa10.97□□□□□ -0.65
COL2A1-209ENST00000546974 RBMXL2O75526 392 aaKnown RBP10.97□□□□□ -0.65
COL2A1-209ENST00000546974 TUSC2O75896 110 aa10.97□□□□□ -0.65
COL2A1-209ENST00000546974 ACTL6BO94805 426 aa10.97□□□□□ -0.65
COL2A1-209ENST00000546974 IGLV2-14P01704 120 aa10.97□□□□□ -0.65
COL2A1-209ENST00000546974 TRBV12-3P01733 135 aa10.97□□□□□ -0.65
COL2A1-209ENST00000546974 IGHV4-30-4P0DP06 118 aa10.97□□□□□ -0.65
COL2A1-209ENST00000546974 RPL30P62888 115 aaKnown RBP10.97□□□□□ -0.65
COL2A1-209ENST00000546974 RPEL1Q2QD12 228 aa10.97□□□□□ -0.65
COL2A1-209ENST00000546974 FAM223AQ8IWN6 122 aa10.97□□□□□ -0.65
COL2A1-209ENST00000546974 SGPP2Q8IWX5 399 aa10.97□□□□□ -0.65
COL2A1-209ENST00000546974 TTC9CQ8N5M4 171 aa10.97□□□□□ -0.65
COL2A1-209ENST00000546974 LGALS14Q8TCE9 139 aa10.97□□□□□ -0.65
COL2A1-209ENST00000546974 SNAPC3Q92966 411 aa10.97□□□□□ -0.65
COL2A1-209ENST00000546974 OR51E2Q9H255 320 aa10.97□□□□□ -0.65
COL2A1-209ENST00000546974 C19orf73Q9NVV2 129 aa10.97□□□□□ -0.65
COL2A1-209ENST00000546974 RHBDL2Q9NX52 303 aa10.97□□□□□ -0.65
COL2A1-209ENST00000546974 RYR2Q92736 4967 aa10.96□□□□□ -0.65
COL2A1-209ENST00000546974 IGKV1D-13A0A0B4J2D9 117 aa10.96□□□□□ -0.65
COL2A1-209ENST00000546974 SSX5O60225 188 aa10.96□□□□□ -0.65
COL2A1-209ENST00000546974 OR2A4O95047 310 aa10.96□□□□□ -0.65
COL2A1-209ENST00000546974 CSN3P07498 182 aa10.96□□□□□ -0.65
COL2A1-209ENST00000546974 IGKV1-13P0DP09 117 aa10.96□□□□□ -0.65
COL2A1-209ENST00000546974 SDC2P34741 201 aa10.96□□□□□ -0.65
COL2A1-209ENST00000546974 SCAND1P57086 179 aa10.96□□□□□ -0.65
COL2A1-209ENST00000546974 EIF4EBP1Q13541 118 aaPredicted RBP10.96□□□□□ -0.65
COL2A1-209ENST00000546974 SLC25A42Q86VD7 318 aa10.96□□□□□ -0.65
COL2A1-209ENST00000546974 OR4S2Q8NH73 311 aa10.96□□□□□ -0.65
COL2A1-209ENST00000546974 MUC7Q8TAX7 377 aa10.96□□□□□ -0.65
COL2A1-209ENST00000546974 HSD17B10Q99714 261 aaKnown RBP10.96□□□□□ -0.65
COL2A1-209ENST00000546974 TM2D3Q9BRN9 247 aa10.96□□□□□ -0.65
COL2A1-209ENST00000546974 AKIP1Q9NQ31 210 aa10.96□□□□□ -0.65
COL2A1-209ENST00000546974 ADAM30Q9UKF2 790 aa10.96□□□□□ -0.65
COL2A1-209ENST00000546974 RHOGP84095 191 aa10.95□□□□□ -0.66
COL2A1-209ENST00000546974 ZNF45Q02386 682 aa10.95□□□□□ -0.66
COL2A1-209ENST00000546974 ATP5G2Q06055 141 aa10.95□□□□□ -0.66
COL2A1-209ENST00000546974 OR2B11Q5JQS5 317 aa10.95□□□□□ -0.66
COL2A1-209ENST00000546974 ZNF773Q6PK81 442 aa10.95□□□□□ -0.66
COL2A1-209ENST00000546974 ZNF66Q6ZN08 573 aa10.95□□□□□ -0.66
COL2A1-209ENST00000546974 Q8N402 240 aa10.95□□□□□ -0.66
COL2A1-209ENST00000546974 MFSD4AQ8N468 514 aa10.95□□□□□ -0.66
COL2A1-209ENST00000546974 VSTM2AQ8TAG5 236 aa10.95□□□□□ -0.66
COL2A1-209ENST00000546974 TCTEX1D2Q8WW35 142 aa10.95□□□□□ -0.66
COL2A1-209ENST00000546974 PEMTQ9UBM1 199 aa10.95□□□□□ -0.66
COL2A1-209ENST00000546974 ETV7Q9Y603 341 aa10.95□□□□□ -0.66
COL2A1-209ENST00000546974 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.94□□□□□ -0.66
COL2A1-209ENST00000546974 A0A0A6YYH2 397 aa10.94□□□□□ -0.66
COL2A1-209ENST00000546974 A6NJ64 397 aa10.94□□□□□ -0.66
COL2A1-209ENST00000546974 AIREO43918 545 aa10.94□□□□□ -0.66
COL2A1-209ENST00000546974 KBTBD11O94819 623 aa10.94□□□□□ -0.66
COL2A1-209ENST00000546974 PRH1P02810 166 aa10.94□□□□□ -0.66
COL2A1-209ENST00000546974 CLEC2LP0C7M8 214 aa10.94□□□□□ -0.66
COL2A1-209ENST00000546974 MXD1Q05195 221 aa10.94□□□□□ -0.66
COL2A1-209ENST00000546974 EXOSC2Q13868 293 aaKnown RBP10.94□□□□□ -0.66
COL2A1-209ENST00000546974 MSMO1Q15800 293 aa10.94□□□□□ -0.66
COL2A1-209ENST00000546974 FAM209BQ5JX69 171 aa10.94□□□□□ -0.66
COL2A1-209ENST00000546974 C10orf55Q5SWW7 151 aa10.94□□□□□ -0.66
COL2A1-209ENST00000546974 LCN12Q6JVE5 192 aa10.94□□□□□ -0.66
COL2A1-209ENST00000546974 PUSL1Q8N0Z8 303 aaKnown RBP10.94□□□□□ -0.66
COL2A1-209ENST00000546974 NECAP1Q8NC96 275 aa10.94□□□□□ -0.66
COL2A1-209ENST00000546974 OR5H6Q8NGV6 325 aa10.94□□□□□ -0.66
COL2A1-209ENST00000546974 TMEM167AQ8TBQ9 72 aa10.94□□□□□ -0.66
COL2A1-209ENST00000546974 OR2A7Q96R45 310 aa10.94□□□□□ -0.66
COL2A1-209ENST00000546974 THAP7Q9BT49 309 aaPredicted RBP10.94□□□□□ -0.66
COL2A1-209ENST00000546974 SPATA2Q9UM82 520 aa10.94□□□□□ -0.66
COL2A1-209ENST00000546974 ZNF257Q9Y2Q1 563 aa10.94□□□□□ -0.66
COL2A1-209ENST00000546974 TRAV18A0A075B6X5 111 aa10.93□□□□□ -0.66
COL2A1-209ENST00000546974 TEX22C9J3V5 150 aa10.93□□□□□ -0.66
COL2A1-209ENST00000546974 BMPR1BO00238 502 aa10.93□□□□□ -0.66
COL2A1-209ENST00000546974 MAS1LP35410 378 aa10.93□□□□□ -0.66
COL2A1-209ENST00000546974 KIR2DS2P43631 304 aa10.93□□□□□ -0.66
COL2A1-209ENST00000546974 MECP2P51608 486 aaKnown RBP10.93□□□□□ -0.66
COL2A1-209ENST00000546974 BRWD1-AS2P59051 145 aa10.93□□□□□ -0.66
COL2A1-209ENST00000546974 ARPC4P59998 168 aa10.93□□□□□ -0.66
COL2A1-209ENST00000546974 CASC10Q5T4H9 136 aa10.93□□□□□ -0.66
COL2A1-209ENST00000546974 VKORC1L1Q8N0U8 176 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms