RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 EXOSC1Q9Y3B2 195 aaKnown RBP4.02□□□□□ -1.77
SNHG1-207ENST00000537965 LOC100130705A0A1B0GUX0 176 aa4.01□□□□□ -1.77
SNHG1-207ENST00000537965 CXorf65A6NEN9 183 aa4.01□□□□□ -1.77
SNHG1-207ENST00000537965 FAM223BA6NKX1 122 aa4.01□□□□□ -1.77
SNHG1-207ENST00000537965 OR11H12B2RN74 326 aa4.01□□□□□ -1.77
SNHG1-207ENST00000537965 EI24O14681 340 aa4.01□□□□□ -1.77
SNHG1-207ENST00000537965 CREBL2O60519 120 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-207ENST00000537965 TNFRSF6BO95407 300 aa4.01□□□□□ -1.77
SNHG1-207ENST00000537965 BAG2O95816 211 aa4.01□□□□□ -1.77
SNHG1-207ENST00000537965 LIMS3P0CW19 117 aa4.01□□□□□ -1.77
SNHG1-207ENST00000537965 LIMS4P0CW20 117 aa4.01□□□□□ -1.77
SNHG1-207ENST00000537965 RRASP10301 218 aa4.01□□□□□ -1.77
SNHG1-207ENST00000537965 GABRB1P18505 474 aa4.01□□□□□ -1.77
SNHG1-207ENST00000537965 RPL39P5Q59GN2 51 aa4.01□□□□□ -1.77
SNHG1-207ENST00000537965 SIGIRRQ6IA17 410 aa4.01□□□□□ -1.77
SNHG1-207ENST00000537965 ZFP1Q6P2D0 407 aa4.01□□□□□ -1.77
SNHG1-207ENST00000537965 MZT2AQ6P582 158 aa4.01□□□□□ -1.77
SNHG1-207ENST00000537965 ZNF880Q6PDB4 577 aa4.01□□□□□ -1.77
SNHG1-207ENST00000537965 GLDNQ6ZMI3 551 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-207ENST00000537965 SLC25A42Q86VD7 318 aa4.01□□□□□ -1.77
SNHG1-207ENST00000537965 FAM223AQ8IWN6 122 aa4.01□□□□□ -1.77
SNHG1-207ENST00000537965 CCDC28AQ8IWP9 274 aa4.01□□□□□ -1.77
SNHG1-207ENST00000537965 TMEM217Q8N7C4 229 aa4.01□□□□□ -1.77
SNHG1-207ENST00000537965 KCNG3Q8TAE7 436 aa4.01□□□□□ -1.77
SNHG1-207ENST00000537965 SETD6Q8TBK2 473 aa4.01□□□□□ -1.77
SNHG1-207ENST00000537965 PTX4Q96A99 478 aa4.01□□□□□ -1.77
SNHG1-207ENST00000537965 ABHD14BQ96IU4 210 aa4.01□□□□□ -1.77
SNHG1-207ENST00000537965 PHB2Q99623 299 aa4.01□□□□□ -1.77
SNHG1-207ENST00000537965 SLC29A1Q99808 456 aa4.01□□□□□ -1.77
SNHG1-207ENST00000537965 AGMATQ9BSE5 352 aa4.01□□□□□ -1.77
SNHG1-207ENST00000537965 FAAP24Q9BTP7 215 aa4.01□□□□□ -1.77
SNHG1-207ENST00000537965 CENPOQ9BU64 300 aa4.01□□□□□ -1.77
SNHG1-207ENST00000537965 C9orf16Q9BUW7 83 aa4.01□□□□□ -1.77
SNHG1-207ENST00000537965 TMEM59Q9BXS4 323 aa4.01□□□□□ -1.77
SNHG1-207ENST00000537965 SRD5A3Q9H8P0 318 aa4.01□□□□□ -1.77
SNHG1-207ENST00000537965 PLEKHJ1Q9NW61 149 aa4.01□□□□□ -1.77
SNHG1-207ENST00000537965 RYR2Q92736 4967 aa4.01□□□□□ -1.77
SNHG1-207ENST00000537965 SACSQ9NZJ4 4579 aa4□□□□□ -1.77
SNHG1-207ENST00000537965 BIRC6Q9NR09 4857 aa4□□□□□ -1.77
SNHG1-207ENST00000537965 TRAV8-7A0A075B6U6 113 aa4□□□□□ -1.77
SNHG1-207ENST00000537965 LOC102724200A0A096LPH7 203 aaPredicted RBP4□□□□□ -1.77
SNHG1-207ENST00000537965 TRBV5-7A0A0A0MS05 114 aa4□□□□□ -1.77
SNHG1-207ENST00000537965 TRBV6-6A0A0A6YYG2 114 aa4□□□□□ -1.77
SNHG1-207ENST00000537965 LGALS9O00182 355 aa4□□□□□ -1.77
SNHG1-207ENST00000537965 UBE2CO00762 179 aa4□□□□□ -1.77
SNHG1-207ENST00000537965 ACTL6BO94805 426 aa4□□□□□ -1.77
SNHG1-207ENST00000537965 NAPSAO96009 420 aa4□□□□□ -1.77
SNHG1-207ENST00000537965 OR9G9P0C7N8 305 aa4□□□□□ -1.77
SNHG1-207ENST00000537965 KIR2DS2P43631 304 aa4□□□□□ -1.77
SNHG1-207ENST00000537965 SERPINB10P48595 397 aa4□□□□□ -1.77
SNHG1-207ENST00000537965 ETV1P50549 477 aa4□□□□□ -1.77
SNHG1-207ENST00000537965 ATP5G2Q06055 141 aa4□□□□□ -1.77
SNHG1-207ENST00000537965 GUCA2BQ16661 112 aa4□□□□□ -1.77
SNHG1-207ENST00000537965 RTL8BQ17RB0 113 aa4□□□□□ -1.77
SNHG1-207ENST00000537965 DEFB114Q30KQ6 69 aa4□□□□□ -1.77
SNHG1-207ENST00000537965 VMA21Q3ZAQ7 101 aa4□□□□□ -1.77
SNHG1-207ENST00000537965 FAM106AQ4KMX7 169 aa4□□□□□ -1.77
SNHG1-207ENST00000537965 OR2G6Q5TZ20 316 aa4□□□□□ -1.77
SNHG1-207ENST00000537965 XAF1Q6GPH4 301 aa4□□□□□ -1.77
SNHG1-207ENST00000537965 OR4A47Q6IF82 309 aa4□□□□□ -1.77
SNHG1-207ENST00000537965 DEFB125Q8N687 156 aa4□□□□□ -1.77
SNHG1-207ENST00000537965 TEX45Q8NA69 505 aa4□□□□□ -1.77
SNHG1-207ENST00000537965 ZNF555Q8NEP9 628 aa4□□□□□ -1.77
SNHG1-207ENST00000537965 RBMXL1Q96E39 390 aaKnown RBP4□□□□□ -1.77
SNHG1-207ENST00000537965 ADTRPQ96IZ2 230 aa4□□□□□ -1.77
SNHG1-207ENST00000537965 HARBI1Q96MB7 349 aa4□□□□□ -1.77
SNHG1-207ENST00000537965 SPIN2AQ99865 258 aa4□□□□□ -1.77
SNHG1-207ENST00000537965 SPIN2BQ9BPZ2 258 aa4□□□□□ -1.77
SNHG1-207ENST00000537965 FAM110AQ9BQ89 295 aa4□□□□□ -1.77
SNHG1-207ENST00000537965 URM1Q9BTM9 101 aaKnown RBP4□□□□□ -1.77
SNHG1-207ENST00000537965 GGTLC1Q9BX51 225 aa4□□□□□ -1.77
SNHG1-207ENST00000537965 RETNQ9HD89 108 aa4□□□□□ -1.77
SNHG1-207ENST00000537965 SLC35D1Q9NTN3 355 aa4□□□□□ -1.77
SNHG1-207ENST00000537965 AASSQ9UDR5 926 aa4□□□□□ -1.77
SNHG1-207ENST00000537965 DIMT1Q9UNQ2 313 aaKnown RBP4□□□□□ -1.77
SNHG1-207ENST00000537965 TP53TG1Q9Y2A0 90 aa4□□□□□ -1.77
SNHG1-207ENST00000537965 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.99□□□□□ -1.77
SNHG1-207ENST00000537965 TRAV25A0A0B4J276 109 aa3.99□□□□□ -1.77
SNHG1-207ENST00000537965 IZUMO1RA6ND01 250 aa3.99□□□□□ -1.77
SNHG1-207ENST00000537965 MSGN1A6NI15 193 aa3.99□□□□□ -1.77
SNHG1-207ENST00000537965 M0R1X1 148 aa3.99□□□□□ -1.77
SNHG1-207ENST00000537965 DYNC1I1O14576 645 aa3.99□□□□□ -1.77
SNHG1-207ENST00000537965 GGCTO75223 188 aaKnown RBP3.99□□□□□ -1.77
SNHG1-207ENST00000537965 IGKV1-16P04430 117 aa3.99□□□□□ -1.77
SNHG1-207ENST00000537965 CD7P09564 240 aa3.99□□□□□ -1.77
SNHG1-207ENST00000537965 GSTT2P0CG29 244 aa3.99□□□□□ -1.77
SNHG1-207ENST00000537965 GSTT2BP0CG30 244 aa3.99□□□□□ -1.77
SNHG1-207ENST00000537965 FOLR2P14207 255 aa3.99□□□□□ -1.77
SNHG1-207ENST00000537965 SRMP19623 302 aa3.99□□□□□ -1.77
SNHG1-207ENST00000537965 BMI1P35226 326 aa3.99□□□□□ -1.77
SNHG1-207ENST00000537965 APOC4P55056 127 aa3.99□□□□□ -1.77
SNHG1-207ENST00000537965 RPS11P62280 158 aaKnown RBP eCLIP3.99□□□□□ -1.77
SNHG1-207ENST00000537965 RPS27AP62979 156 aaKnown RBP3.99□□□□□ -1.77
SNHG1-207ENST00000537965 HLA-DRB3P79483 266 aa3.99□□□□□ -1.77
SNHG1-207ENST00000537965 MRPS15P82914 257 aaKnown RBP3.99□□□□□ -1.77
SNHG1-207ENST00000537965 RHOGP84095 191 aa3.99□□□□□ -1.77
SNHG1-207ENST00000537965 TNFRSF9Q07011 255 aa3.99□□□□□ -1.77
SNHG1-207ENST00000537965 EXOSC2Q13868 293 aaKnown RBP3.99□□□□□ -1.77
SNHG1-207ENST00000537965 SSX1Q16384 188 aa3.99□□□□□ -1.77
SNHG1-207ENST00000537965 ZNF57Q68EA5 555 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms