RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 LINC00473A8K010 186 aa14.97□□□□□ -0.01
TNFRSF1B-204ENST00000536782 RBMXL2O75526 392 aaKnown RBP14.97□□□□□ -0.01
TNFRSF1B-204ENST00000536782 FGF9P31371 208 aaPredicted RBP14.97□□□□□ -0.01
TNFRSF1B-204ENST00000536782 HAGHQ16775 308 aa14.97□□□□□ -0.01
TNFRSF1B-204ENST00000536782 IDO2Q6ZQW0 420 aa14.97□□□□□ -0.01
TNFRSF1B-204ENST00000536782 Q6ZS49 121 aa14.97□□□□□ -0.01
TNFRSF1B-204ENST00000536782 ACOT12Q8WYK0 555 aa14.97□□□□□ -0.01
TNFRSF1B-204ENST00000536782 TUBA4BQ9H853 241 aa14.97□□□□□ -0.01
TNFRSF1B-204ENST00000536782 PEMTQ9UBM1 199 aa14.97□□□□□ -0.01
TNFRSF1B-204ENST00000536782 LCE6AA0A183 80 aa14.96□□□□□ -0.01
TNFRSF1B-204ENST00000536782 SHISA3A0PJX4 238 aa14.96□□□□□ -0.01
TNFRSF1B-204ENST00000536782 FAM223BA6NKX1 122 aa14.96□□□□□ -0.01
TNFRSF1B-204ENST00000536782 CREBL2O60519 120 aaPredicted RBP14.96□□□□□ -0.01
TNFRSF1B-204ENST00000536782 RAB3BP20337 219 aa14.96□□□□□ -0.01
TNFRSF1B-204ENST00000536782 RHOGP84095 191 aa14.96□□□□□ -0.01
TNFRSF1B-204ENST00000536782 ARL6IP1Q15041 203 aa14.96□□□□□ -0.01
TNFRSF1B-204ENST00000536782 FAM223AQ8IWN6 122 aa14.96□□□□□ -0.01
TNFRSF1B-204ENST00000536782 THAP7Q9BT49 309 aaPredicted RBP14.96□□□□□ -0.01
TNFRSF1B-204ENST00000536782 HYDINQ4G0P3 5121 aa14.96□□□□□ -0.01
TNFRSF1B-204ENST00000536782 IGKV1D-8A0A087WSZ0 117 aa14.95□□□□□ -0.02
TNFRSF1B-204ENST00000536782 ACTL6BO94805 426 aa14.95□□□□□ -0.02
TNFRSF1B-204ENST00000536782 ATP5G2Q06055 141 aa14.95□□□□□ -0.02
TNFRSF1B-204ENST00000536782 C22orf42Q6IC83 251 aa14.95□□□□□ -0.02
TNFRSF1B-204ENST00000536782 OR2K2Q8NGT1 345 aa14.95□□□□□ -0.02
TNFRSF1B-204ENST00000536782 ATG5Q9H1Y0 275 aa14.95□□□□□ -0.02
TNFRSF1B-204ENST00000536782 ZNF430Q9H8G1 570 aaPredicted RBP14.95□□□□□ -0.02
TNFRSF1B-204ENST00000536782 AKIP1Q9NQ31 210 aa14.95□□□□□ -0.02
TNFRSF1B-204ENST00000536782 AIREO43918 545 aa14.94□□□□□ -0.02
TNFRSF1B-204ENST00000536782 PRH1P02810 166 aa14.94□□□□□ -0.02
TNFRSF1B-204ENST00000536782 IFNA6P05013 189 aa14.94□□□□□ -0.02
TNFRSF1B-204ENST00000536782 SAA1P0DJI8 122 aaPredicted RBP14.94□□□□□ -0.02
TNFRSF1B-204ENST00000536782 DTYMKP23919 212 aa14.94□□□□□ -0.02
TNFRSF1B-204ENST00000536782 EXOSC2Q13868 293 aaKnown RBP14.94□□□□□ -0.02
TNFRSF1B-204ENST00000536782 CDK10Q15131 360 aa14.94□□□□□ -0.02
TNFRSF1B-204ENST00000536782 ZNF645Q8N7E2 425 aa14.94□□□□□ -0.02
TNFRSF1B-204ENST00000536782 SPIN2AQ99865 258 aa14.94□□□□□ -0.02
TNFRSF1B-204ENST00000536782 SPIN2BQ9BPZ2 258 aa14.94□□□□□ -0.02
TNFRSF1B-204ENST00000536782 DCUN1D5Q9BTE7 237 aa14.94□□□□□ -0.02
TNFRSF1B-204ENST00000536782 TXNL4BQ9NX01 149 aaKnown RBP14.94□□□□□ -0.02
TNFRSF1B-204ENST00000536782 ELF5Q9UKW6 265 aaPredicted RBP14.94□□□□□ -0.02
TNFRSF1B-204ENST00000536782 TRBV9A0A0B4J1U6 114 aa14.93□□□□□ -0.02
TNFRSF1B-204ENST00000536782 IZUMO1RA6ND01 250 aa14.93□□□□□ -0.02
TNFRSF1B-204ENST00000536782 J3QRK9 145 aa14.93□□□□□ -0.02
TNFRSF1B-204ENST00000536782 BMPR1BO00238 502 aa14.93□□□□□ -0.02
TNFRSF1B-204ENST00000536782 FCGR3BO75015 233 aa14.93□□□□□ -0.02
TNFRSF1B-204ENST00000536782 TUSC2O75896 110 aa14.93□□□□□ -0.02
TNFRSF1B-204ENST00000536782 CTXN2P0C2S0 81 aa14.93□□□□□ -0.02
TNFRSF1B-204ENST00000536782 MECP2P51608 486 aaKnown RBP14.93□□□□□ -0.02
TNFRSF1B-204ENST00000536782 ZNF45Q02386 682 aa14.93□□□□□ -0.02
TNFRSF1B-204ENST00000536782 CDNFQ49AH0 187 aa14.93□□□□□ -0.02
TNFRSF1B-204ENST00000536782 MMD2Q8IY49 270 aa14.93□□□□□ -0.02
TNFRSF1B-204ENST00000536782 TTC9CQ8N5M4 171 aa14.93□□□□□ -0.02
TNFRSF1B-204ENST00000536782 ST6GALNAC5Q9BVH7 336 aa14.93□□□□□ -0.02
TNFRSF1B-204ENST00000536782 SSR3Q9UNL2 185 aa14.93□□□□□ -0.02
TNFRSF1B-204ENST00000536782 PRELID3BQ9Y3B1 194 aa14.93□□□□□ -0.02
TNFRSF1B-204ENST00000536782 CD36P16671 472 aa14.92□□□□□ -0.02
TNFRSF1B-204ENST00000536782 KCTD9Q7L273 389 aa14.92□□□□□ -0.02
TNFRSF1B-204ENST00000536782 TPRA1Q86W33 373 aa14.92□□□□□ -0.02
TNFRSF1B-204ENST00000536782 NECAP1Q8NC96 275 aa14.92□□□□□ -0.02
TNFRSF1B-204ENST00000536782 MRPS7Q9Y2R9 242 aaKnown RBP14.92□□□□□ -0.02
TNFRSF1B-204ENST00000536782 OR2W1Q9Y3N9 320 aa14.92□□□□□ -0.02
TNFRSF1B-204ENST00000536782 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.91□□□□□ -0.02
TNFRSF1B-204ENST00000536782 SLC22A5O76082 557 aa14.91□□□□□ -0.02
TNFRSF1B-204ENST00000536782 TNFAIP8O95379 198 aa14.91□□□□□ -0.02
TNFRSF1B-204ENST00000536782 NEDD8Q15843 81 aa14.91□□□□□ -0.02
TNFRSF1B-204ENST00000536782 FAM209BQ5JX69 171 aa14.91□□□□□ -0.02
TNFRSF1B-204ENST00000536782 C10orf55Q5SWW7 151 aa14.91□□□□□ -0.02
TNFRSF1B-204ENST00000536782 SLC25A42Q86VD7 318 aa14.91□□□□□ -0.02
TNFRSF1B-204ENST00000536782 NR2C2APQ86WQ0 139 aa14.91□□□□□ -0.02
TNFRSF1B-204ENST00000536782 KCTD12Q96CX2 325 aaKnown RBP14.91□□□□□ -0.02
TNFRSF1B-204ENST00000536782 DCSTAMPQ9H295 470 aa14.91□□□□□ -0.02
TNFRSF1B-204ENST00000536782 RBMX2Q9Y388 322 aaKnown RBP14.91□□□□□ -0.02
TNFRSF1B-204ENST00000536782 NOTOA8MTQ0 251 aa14.9□□□□□ -0.02
TNFRSF1B-204ENST00000536782 HLA-DQB1P01920 261 aa14.9□□□□□ -0.02
TNFRSF1B-204ENST00000536782 NFYAP23511 347 aaPredicted RBP14.9□□□□□ -0.02
TNFRSF1B-204ENST00000536782 CD81P60033 236 aa14.9□□□□□ -0.02
TNFRSF1B-204ENST00000536782 CD300EQ496F6 205 aaPredicted RBP14.9□□□□□ -0.02
TNFRSF1B-204ENST00000536782 OR2B11Q5JQS5 317 aa14.9□□□□□ -0.02
TNFRSF1B-204ENST00000536782 HACD4Q5VWC8 232 aa14.9□□□□□ -0.02
TNFRSF1B-204ENST00000536782 LAX1Q8IWV1 398 aa14.9□□□□□ -0.02
TNFRSF1B-204ENST00000536782 OR51E2Q9H255 320 aa14.9□□□□□ -0.02
TNFRSF1B-204ENST00000536782 PLEKHA3Q9HB20 300 aa14.9□□□□□ -0.02
TNFRSF1B-204ENST00000536782 CEPT1Q9Y6K0 416 aa14.9□□□□□ -0.02
TNFRSF1B-204ENST00000536782 A0A087WXM4 84 aa14.89□□□□□ -0.03
TNFRSF1B-204ENST00000536782 OR2J3O76001 311 aa14.89□□□□□ -0.03
TNFRSF1B-204ENST00000536782 RPL30P62888 115 aaKnown RBP14.89□□□□□ -0.03
TNFRSF1B-204ENST00000536782 C15orf32Q32M92 178 aa14.89□□□□□ -0.03
TNFRSF1B-204ENST00000536782 ADAMTSL5Q6ZMM2 481 aa14.89□□□□□ -0.03
TNFRSF1B-204ENST00000536782 DYNLRB2Q8TF09 96 aa14.89□□□□□ -0.03
TNFRSF1B-204ENST00000536782 NEURL2Q9BR09 285 aa14.89□□□□□ -0.03
TNFRSF1B-204ENST00000536782 VCX3AQ9NNX9 186 aa14.89□□□□□ -0.03
TNFRSF1B-204ENST00000536782 SLC2A8Q9NY64 477 aa14.89□□□□□ -0.03
TNFRSF1B-204ENST00000536782 ZNF257Q9Y2Q1 563 aa14.89□□□□□ -0.03
TNFRSF1B-204ENST00000536782 PLECQ15149 4684 aaKnown RBP14.89□□□□□ -0.03
TNFRSF1B-204ENST00000536782 SMIM30A4D0T7 59 aa14.88□□□□□ -0.03
TNFRSF1B-204ENST00000536782 TPPPO94811 219 aa14.88□□□□□ -0.03
TNFRSF1B-204ENST00000536782 IGLV2-14P01704 120 aa14.88□□□□□ -0.03
TNFRSF1B-204ENST00000536782 CNIH2Q6PI25 160 aa14.88□□□□□ -0.03
TNFRSF1B-204ENST00000536782 LINC00322Q6ZN03 302 aaPredicted RBP14.88□□□□□ -0.03
TNFRSF1B-204ENST00000536782 VKORC1L1Q8N0U8 176 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms