RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 TMEM235A6NFC5 223 aa6.88□□□□□ -1.31
CHD4-204ENST00000535810 SOX15O60248 233 aa6.88□□□□□ -1.31
CHD4-204ENST00000535810 SCGNO76038 276 aa6.88□□□□□ -1.31
CHD4-204ENST00000535810 TPPPO94811 219 aa6.88□□□□□ -1.31
CHD4-204ENST00000535810 EGR2P11161 476 aaPredicted RBP6.88□□□□□ -1.31
CHD4-204ENST00000535810 RAB25P57735 213 aa6.88□□□□□ -1.31
CHD4-204ENST00000535810 FHL3Q13643 280 aa6.88□□□□□ -1.31
CHD4-204ENST00000535810 PSG5Q15238 335 aa6.88□□□□□ -1.31
CHD4-204ENST00000535810 CDNFQ49AH0 187 aa6.88□□□□□ -1.31
CHD4-204ENST00000535810 TMEM65Q6PI78 240 aa6.88□□□□□ -1.31
CHD4-204ENST00000535810 SNX29P2Q8IUI4 249 aa6.88□□□□□ -1.31
CHD4-204ENST00000535810 OR5H6Q8NGV6 325 aa6.88□□□□□ -1.31
CHD4-204ENST00000535810 NUDCD2Q8WVJ2 157 aa6.88□□□□□ -1.31
CHD4-204ENST00000535810 DPF1Q92782 380 aa6.88□□□□□ -1.31
CHD4-204ENST00000535810 FLYWCH2Q96CP2 140 aaKnown RBP6.88□□□□□ -1.31
CHD4-204ENST00000535810 SLC25A38Q96DW6 304 aa6.88□□□□□ -1.31
CHD4-204ENST00000535810 S100A16Q96FQ6 103 aaKnown RBP6.88□□□□□ -1.31
CHD4-204ENST00000535810 UBE2E2Q96LR5 201 aa6.88□□□□□ -1.31
CHD4-204ENST00000535810 TSNAXQ99598 290 aaKnown RBP6.88□□□□□ -1.31
CHD4-204ENST00000535810 SDHCQ99643 169 aaPredicted RBP6.88□□□□□ -1.31
CHD4-204ENST00000535810 GINS4Q9BRT9 223 aa6.88□□□□□ -1.31
CHD4-204ENST00000535810 MCRIP2Q9BUT9 160 aaKnown RBP6.88□□□□□ -1.31
CHD4-204ENST00000535810 GPR61Q9BZJ8 451 aa6.88□□□□□ -1.31
CHD4-204ENST00000535810 SLC35D1Q9NTN3 355 aa6.88□□□□□ -1.31
CHD4-204ENST00000535810 RHBDL2Q9NX52 303 aa6.88□□□□□ -1.31
CHD4-204ENST00000535810 A0A1W2PN81 502 aa6.87□□□□□ -1.31
CHD4-204ENST00000535810 I3L521 148 aa6.87□□□□□ -1.31
CHD4-204ENST00000535810 K7EIL1 84 aa6.87□□□□□ -1.31
CHD4-204ENST00000535810 SLC25A17O43808 307 aa6.87□□□□□ -1.31
CHD4-204ENST00000535810 SSX5O60225 188 aa6.87□□□□□ -1.31
CHD4-204ENST00000535810 PFDN1O60925 122 aa6.87□□□□□ -1.31
CHD4-204ENST00000535810 CA2P00918 260 aa6.87□□□□□ -1.31
CHD4-204ENST00000535810 IGLV2-23P01705 113 aa6.87□□□□□ -1.31
CHD4-204ENST00000535810 CHRNA7P36544 502 aa6.87□□□□□ -1.31
CHD4-204ENST00000535810 RAB9AP51151 201 aa6.87□□□□□ -1.31
CHD4-204ENST00000535810 GNG2P59768 71 aa6.87□□□□□ -1.31
CHD4-204ENST00000535810 RPS16P62249 146 aaKnown RBP6.87□□□□□ -1.31
CHD4-204ENST00000535810 SSBP2P81877 361 aaPredicted RBP6.87□□□□□ -1.31
CHD4-204ENST00000535810 MRPS10P82664 201 aaKnown RBP6.87□□□□□ -1.31
CHD4-204ENST00000535810 ASAH1Q13510 395 aa6.87□□□□□ -1.31
CHD4-204ENST00000535810 BAK1Q16611 211 aa6.87□□□□□ -1.31
CHD4-204ENST00000535810 ZNF260Q3ZCT1 412 aa6.87□□□□□ -1.31
CHD4-204ENST00000535810 ASPHD1Q5U4P2 390 aa6.87□□□□□ -1.31
CHD4-204ENST00000535810 MZT2BQ6NZ67 158 aa6.87□□□□□ -1.31
CHD4-204ENST00000535810 ZNF562Q6V9R5 426 aa6.87□□□□□ -1.31
CHD4-204ENST00000535810 TCTEX1D1Q8N7M0 179 aa6.87□□□□□ -1.31
CHD4-204ENST00000535810 ZNF491Q8N8L2 437 aa6.87□□□□□ -1.31
CHD4-204ENST00000535810 ABHD5Q8WTS1 349 aa6.87□□□□□ -1.31
CHD4-204ENST00000535810 CASTOR1Q8WTX7 329 aa6.87□□□□□ -1.31
CHD4-204ENST00000535810 CLCC1Q96S66 551 aa6.87□□□□□ -1.31
CHD4-204ENST00000535810 FAM103A1Q9BTL3 118 aaKnown RBP6.87□□□□□ -1.31
CHD4-204ENST00000535810 ST6GALNAC5Q9BVH7 336 aa6.87□□□□□ -1.31
CHD4-204ENST00000535810 DIABLOQ9NR28 239 aa6.87□□□□□ -1.31
CHD4-204ENST00000535810 FOXA2Q9Y261 457 aaPredicted RBP6.87□□□□□ -1.31
CHD4-204ENST00000535810 VSIG4Q9Y279 399 aa6.87□□□□□ -1.31
CHD4-204ENST00000535810 NUBP2Q9Y5Y2 271 aa6.87□□□□□ -1.31
CHD4-204ENST00000535810 COL7A1Q02388 2944 aa6.87□□□□□ -1.31
CHD4-204ENST00000535810 WI2-2373I1.2A0A1W2PRP0 233 aa6.86□□□□□ -1.31
CHD4-204ENST00000535810 CTDSPLO15194 276 aa6.86□□□□□ -1.31
CHD4-204ENST00000535810 HLA-DQB1P01920 261 aa6.86□□□□□ -1.31
CHD4-204ENST00000535810 CRYGBP07316 175 aa6.86□□□□□ -1.31
CHD4-204ENST00000535810 DUTP33316 252 aaKnown RBP6.86□□□□□ -1.31
CHD4-204ENST00000535810 LUMP51884 338 aaPredicted RBP6.86□□□□□ -1.31
CHD4-204ENST00000535810 GNB1P62873 340 aa6.86□□□□□ -1.31
CHD4-204ENST00000535810 RUNX1Q01196 453 aa6.86□□□□□ -1.31
CHD4-204ENST00000535810 FXYD3Q14802 87 aa6.86□□□□□ -1.31
CHD4-204ENST00000535810 RTL8BQ17RB0 113 aa6.86□□□□□ -1.31
CHD4-204ENST00000535810 AKIRIN2Q53H80 203 aa6.86□□□□□ -1.31
CHD4-204ENST00000535810 ACTBL2Q562R1 376 aa6.86□□□□□ -1.31
CHD4-204ENST00000535810 VAX1Q5SQQ9 334 aa6.86□□□□□ -1.31
CHD4-204ENST00000535810 ZNF57Q68EA5 555 aaPredicted RBP6.86□□□□□ -1.31
CHD4-204ENST00000535810 PPP1R27Q86WC6 154 aa6.86□□□□□ -1.31
CHD4-204ENST00000535810 OR11H1Q8NG94 326 aa6.86□□□□□ -1.31
CHD4-204ENST00000535810 OR5M8Q8NGP6 311 aa6.86□□□□□ -1.31
CHD4-204ENST00000535810 GRPEL2Q8TAA5 225 aa6.86□□□□□ -1.31
CHD4-204ENST00000535810 DDB2Q92466 427 aa6.86□□□□□ -1.31
CHD4-204ENST00000535810 ARPC1AQ92747 370 aa6.86□□□□□ -1.31
CHD4-204ENST00000535810 HARBI1Q96MB7 349 aa6.86□□□□□ -1.31
CHD4-204ENST00000535810 OR5B12Q96R08 314 aa6.86□□□□□ -1.31
CHD4-204ENST00000535810 ANXA10Q9UJ72 324 aa6.86□□□□□ -1.31
CHD4-204ENST00000535810 MRPS7Q9Y2R9 242 aaKnown RBP6.86□□□□□ -1.31
CHD4-204ENST00000535810 RBM7Q9Y580 266 aaKnown RBP6.86□□□□□ -1.31
CHD4-204ENST00000535810 TNCP24821 2201 aa6.86□□□□□ -1.31
CHD4-204ENST00000535810 DNAH9Q9NYC9 4486 aa6.86□□□□□ -1.31
CHD4-204ENST00000535810 TRAV18A0A075B6X5 111 aa6.85□□□□□ -1.31
CHD4-204ENST00000535810 A0A0A6YYH2 397 aa6.85□□□□□ -1.31
CHD4-204ENST00000535810 IGKV1D-13A0A0B4J2D9 117 aa6.85□□□□□ -1.31
CHD4-204ENST00000535810 A6NJ64 397 aa6.85□□□□□ -1.31
CHD4-204ENST00000535810 SRRM4A7MD48 611 aaKnown RBP6.85□□□□□ -1.31
CHD4-204ENST00000535810 LINC00473A8K010 186 aa6.85□□□□□ -1.31
CHD4-204ENST00000535810 CENPXA8MT69 81 aa6.85□□□□□ -1.31
CHD4-204ENST00000535810 ARPC1BO15143 372 aaKnown RBP6.85□□□□□ -1.31
CHD4-204ENST00000535810 GSTZ1O43708 216 aaPredicted RBP6.85□□□□□ -1.31
CHD4-204ENST00000535810 IGLV2-14P01704 120 aa6.85□□□□□ -1.31
CHD4-204ENST00000535810 CTXN2P0C2S0 81 aa6.85□□□□□ -1.31
CHD4-204ENST00000535810 OR8U8P0C7N1 319 aa6.85□□□□□ -1.31
CHD4-204ENST00000535810 IGKV1-13P0DP09 117 aa6.85□□□□□ -1.31
CHD4-204ENST00000535810 NFYAP23511 347 aaPredicted RBP6.85□□□□□ -1.31
CHD4-204ENST00000535810 LGALS7P47929 136 aa6.85□□□□□ -1.31
CHD4-204ENST00000535810 ZNF616Q08AN1 781 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms