RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 MEF2DQ14814 521 aa9.51□□□□□ -0.89
CAPN1-223ENST00000533079 RSU1Q15404 277 aa9.51□□□□□ -0.89
CAPN1-223ENST00000533079 ECSCRQ19T08 205 aa9.51□□□□□ -0.89
CAPN1-223ENST00000533079 PLAC9Q5JTB6 97 aa9.51□□□□□ -0.89
CAPN1-223ENST00000533079 ZNF660Q6AZW8 331 aaPredicted RBP9.51□□□□□ -0.89
CAPN1-223ENST00000533079 LCN12Q6JVE5 192 aa9.51□□□□□ -0.89
CAPN1-223ENST00000533079 NPBQ8NG41 125 aa9.51□□□□□ -0.89
CAPN1-223ENST00000533079 HIPK2Q9H2X6 1198 aa9.51□□□□□ -0.89
CAPN1-223ENST00000533079 GNG12Q9UBI6 72 aa9.51□□□□□ -0.89
CAPN1-223ENST00000533079 KCNK7Q9Y2U2 307 aa9.51□□□□□ -0.89
CAPN1-223ENST00000533079 PCLOQ9Y6V0 5065 aa9.51□□□□□ -0.89
CAPN1-223ENST00000533079 IGHV3-43A0A0B4J1X8 118 aa9.5□□□□□ -0.89
CAPN1-223ENST00000533079 TRAV39A0A0B4J263 110 aa9.5□□□□□ -0.89
CAPN1-223ENST00000533079 TMEM235A6NFC5 223 aa9.5□□□□□ -0.89
CAPN1-223ENST00000533079 SLC31A2O15432 143 aa9.5□□□□□ -0.89
CAPN1-223ENST00000533079 SOCS1O15524 211 aa9.5□□□□□ -0.89
CAPN1-223ENST00000533079 PRAF2O60831 178 aa9.5□□□□□ -0.89
CAPN1-223ENST00000533079 OR7C1O76099 320 aaPredicted RBP9.5□□□□□ -0.89
CAPN1-223ENST00000533079 RGS11O94810 467 aa9.5□□□□□ -0.89
CAPN1-223ENST00000533079 H2AFB2P0C5Z0 115 aa9.5□□□□□ -0.89
CAPN1-223ENST00000533079 IGHV3-43DP0DP04 118 aa9.5□□□□□ -0.89
CAPN1-223ENST00000533079 PTHLHP12272 177 aa9.5□□□□□ -0.89
CAPN1-223ENST00000533079 RBM11P57052 281 aaKnown RBP9.5□□□□□ -0.89
CAPN1-223ENST00000533079 TATDN3Q17R31 274 aa9.5□□□□□ -0.89
CAPN1-223ENST00000533079 MPV17LQ2QL34 196 aa9.5□□□□□ -0.89
CAPN1-223ENST00000533079 C6orf183Q5T699 404 aa9.5□□□□□ -0.89
CAPN1-223ENST00000533079 STEAP1BQ6NZ63 245 aa9.5□□□□□ -0.89
CAPN1-223ENST00000533079 TRAT1Q6PIZ9 186 aa9.5□□□□□ -0.89
CAPN1-223ENST00000533079 ZNF497Q6ZNH5 498 aa9.5□□□□□ -0.89
CAPN1-223ENST00000533079 HAPLN4Q86UW8 402 aa9.5□□□□□ -0.89
CAPN1-223ENST00000533079 NICN1Q9BSH3 213 aa9.5□□□□□ -0.89
CAPN1-223ENST00000533079 BANF2Q9H503 90 aa9.5□□□□□ -0.89
CAPN1-223ENST00000533079 ST3GAL6Q9Y274 331 aa9.5□□□□□ -0.89
CAPN1-223ENST00000533079 A0A1W2PP11 408 aa9.49□□□□□ -0.89
CAPN1-223ENST00000533079 NDUFB6O95139 128 aa9.49□□□□□ -0.89
CAPN1-223ENST00000533079 HTR3BO95264 441 aa9.49□□□□□ -0.89
CAPN1-223ENST00000533079 MT-ND4P03905 459 aa9.49□□□□□ -0.89
CAPN1-223ENST00000533079 IL5P05113 134 aa9.49□□□□□ -0.89
CAPN1-223ENST00000533079 GLAP06280 429 aa9.49□□□□□ -0.89
CAPN1-223ENST00000533079 GNB3P16520 340 aa9.49□□□□□ -0.89
CAPN1-223ENST00000533079 SERPINA2P20848 420 aa9.49□□□□□ -0.89
CAPN1-223ENST00000533079 GNG2P59768 71 aa9.49□□□□□ -0.89
CAPN1-223ENST00000533079 NDPQ00604 133 aa9.49□□□□□ -0.89
CAPN1-223ENST00000533079 ACTBL2Q562R1 376 aa9.49□□□□□ -0.89
CAPN1-223ENST00000533079 RNASE12Q5GAN4 147 aaKnown RBP9.49□□□□□ -0.89
CAPN1-223ENST00000533079 CT45A1Q5HYN5 189 aa9.49□□□□□ -0.89
CAPN1-223ENST00000533079 CT45A3Q8NHU0 189 aa9.49□□□□□ -0.89
CAPN1-223ENST00000533079 ARHGAP5-AS1Q96IT6 56 aa9.49□□□□□ -0.89
CAPN1-223ENST00000533079 RHOVQ96L33 236 aa9.49□□□□□ -0.89
CAPN1-223ENST00000533079 SLC25A21Q9BQT8 299 aaPredicted RBP9.49□□□□□ -0.89
CAPN1-223ENST00000533079 PECRQ9BY49 303 aa9.49□□□□□ -0.89
CAPN1-223ENST00000533079 RANGRFQ9HD47 186 aaPredicted RBP9.49□□□□□ -0.89
CAPN1-223ENST00000533079 SLC2A8Q9NY64 477 aa9.49□□□□□ -0.89
CAPN1-223ENST00000533079 SIGLEC8Q9NYZ4 499 aa9.49□□□□□ -0.89
CAPN1-223ENST00000533079 A0A0B4J293 547 aa9.48□□□□□ -0.89
CAPN1-223ENST00000533079 SSX5O60225 188 aa9.48□□□□□ -0.89
CAPN1-223ENST00000533079 RAB3DO95716 219 aa9.48□□□□□ -0.89
CAPN1-223ENST00000533079 LY6G6CO95867 125 aa9.48□□□□□ -0.89
CAPN1-223ENST00000533079 CD3DP04234 171 aa9.48□□□□□ -0.89
CAPN1-223ENST00000533079 ZNF735P0CB33 412 aa9.48□□□□□ -0.89
CAPN1-223ENST00000533079 CCR6P51684 374 aa9.48□□□□□ -0.89
CAPN1-223ENST00000533079 ZNF134P52741 427 aa9.48□□□□□ -0.89
CAPN1-223ENST00000533079 TPPP2P59282 170 aa9.48□□□□□ -0.89
CAPN1-223ENST00000533079 RBMS2Q15434 407 aaKnown RBP9.48□□□□□ -0.89
CAPN1-223ENST00000533079 AKIRIN2Q53H80 203 aa9.48□□□□□ -0.89
CAPN1-223ENST00000533079 LINC00322Q6ZN03 302 aaPredicted RBP9.48□□□□□ -0.89
CAPN1-223ENST00000533079 HOGA1Q86XE5 327 aa9.48□□□□□ -0.89
CAPN1-223ENST00000533079 OR4C16Q8NGL9 310 aa9.48□□□□□ -0.89
CAPN1-223ENST00000533079 OR9G4Q8NGQ1 327 aa9.48□□□□□ -0.89
CAPN1-223ENST00000533079 OR2K2Q8NGT1 345 aa9.48□□□□□ -0.89
CAPN1-223ENST00000533079 OR10K1Q8NGX5 313 aa9.48□□□□□ -0.89
CAPN1-223ENST00000533079 NABP2Q9BQ15 211 aa9.48□□□□□ -0.89
CAPN1-223ENST00000533079 ABHD14AQ9BUJ0 271 aa9.48□□□□□ -0.89
CAPN1-223ENST00000533079 SPACA1Q9HBV2 294 aa9.48□□□□□ -0.89
CAPN1-223ENST00000533079 RETNQ9HD89 108 aa9.48□□□□□ -0.89
CAPN1-223ENST00000533079 NUDT15Q9NV35 164 aa9.48□□□□□ -0.89
CAPN1-223ENST00000533079 FBXO7Q9Y3I1 522 aa9.48□□□□□ -0.89
CAPN1-223ENST00000533079 DISC1C4P0D8 188 aa9.47□□□□□ -0.89
CAPN1-223ENST00000533079 IGHV3-11P01762 117 aa9.47□□□□□ -0.89
CAPN1-223ENST00000533079 HNRNPCP07910 306 aaKnown RBP eCLIP9.47□□□□□ -0.89
CAPN1-223ENST00000533079 FUT3P21217 361 aa9.47□□□□□ -0.89
CAPN1-223ENST00000533079 DTYMKP23919 212 aa9.47□□□□□ -0.89
CAPN1-223ENST00000533079 SIGIRRQ6IA17 410 aa9.47□□□□□ -0.89
CAPN1-223ENST00000533079 FAM71F2Q6NXP2 309 aa9.47□□□□□ -0.89
CAPN1-223ENST00000533079 AKAP14Q86UN6 197 aa9.47□□□□□ -0.89
CAPN1-223ENST00000533079 OR10V1Q8NGI7 309 aa9.47□□□□□ -0.89
CAPN1-223ENST00000533079 OR6F1Q8NGZ6 308 aa9.47□□□□□ -0.89
CAPN1-223ENST00000533079 UBALD1Q8TB05 177 aa9.47□□□□□ -0.89
CAPN1-223ENST00000533079 NEK7Q8TDX7 302 aa9.47□□□□□ -0.89
CAPN1-223ENST00000533079 CCDC107Q8WV48 283 aa9.47□□□□□ -0.89
CAPN1-223ENST00000533079 PRRT1Q99946 306 aa9.47□□□□□ -0.89
CAPN1-223ENST00000533079 FAM110AQ9BQ89 295 aa9.47□□□□□ -0.89
CAPN1-223ENST00000533079 C20orf85Q9H1P6 137 aa9.47□□□□□ -0.89
CAPN1-223ENST00000533079 PLEKHJ1Q9NW61 149 aa9.47□□□□□ -0.89
CAPN1-223ENST00000533079 SCP2D1Q9UJQ7 156 aa9.47□□□□□ -0.89
CAPN1-223ENST00000533079 JPT1Q9UK76 154 aa9.47□□□□□ -0.89
CAPN1-223ENST00000533079 TRAPPC2LQ9UL33 140 aa9.47□□□□□ -0.89
CAPN1-223ENST00000533079 ALG5Q9Y673 324 aa9.47□□□□□ -0.89
CAPN1-223ENST00000533079 HECTD4Q9Y4D8 3996 aa9.47□□□□□ -0.89
CAPN1-223ENST00000533079 NUPR2A6NF83 97 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms