RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 C2orf68Q2NKX9 166 aa10.52□□□□□ -0.73
PCDHGA6-201ENST00000517434 Q6ZT83 130 aa10.52□□□□□ -0.73
PCDHGA6-201ENST00000517434 OR4X1Q8NH49 305 aa10.52□□□□□ -0.73
PCDHGA6-201ENST00000517434 ZNF714Q96N38 554 aa10.52□□□□□ -0.73
PCDHGA6-201ENST00000517434 PXMP4Q9Y6I8 212 aa10.52□□□□□ -0.73
PCDHGA6-201ENST00000517434 LOC389332A0A1B0GUA5 103 aa10.52□□□□□ -0.73
PCDHGA6-201ENST00000517434 MEX3AA1L020 520 aaKnown RBP10.52□□□□□ -0.73
PCDHGA6-201ENST00000517434 SLC25A17O43808 307 aa10.52□□□□□ -0.73
PCDHGA6-201ENST00000517434 GDF9O60383 454 aa10.52□□□□□ -0.73
PCDHGA6-201ENST00000517434 APOBEC3AP31941 199 aaPredicted RBP10.52□□□□□ -0.73
PCDHGA6-201ENST00000517434 PRDX2P32119 198 aa10.52□□□□□ -0.73
PCDHGA6-201ENST00000517434 GFRA1P56159 465 aa10.52□□□□□ -0.73
PCDHGA6-201ENST00000517434 ARF6P62330 175 aa10.52□□□□□ -0.73
PCDHGA6-201ENST00000517434 CFHR1Q03591 330 aa10.52□□□□□ -0.73
PCDHGA6-201ENST00000517434 PSMG4Q5JS54 123 aa10.52□□□□□ -0.73
PCDHGA6-201ENST00000517434 AQP3Q92482 292 aa10.52□□□□□ -0.73
PCDHGA6-201ENST00000517434 H0Y980 276 aa10.51□□□□□ -0.73
PCDHGA6-201ENST00000517434 HIST1H2BKO60814 126 aa10.51□□□□□ -0.73
PCDHGA6-201ENST00000517434 HIST1H2BJP06899 126 aa10.51□□□□□ -0.73
PCDHGA6-201ENST00000517434 HIST1H2BOP23527 126 aa10.51□□□□□ -0.73
PCDHGA6-201ENST00000517434 HIST1H2BBP33778 126 aa10.51□□□□□ -0.73
PCDHGA6-201ENST00000517434 HIST1H2BDP58876 126 aa10.51□□□□□ -0.73
PCDHGA6-201ENST00000517434 HIST1H2BCP62807 126 aa10.51□□□□□ -0.73
PCDHGA6-201ENST00000517434 HIST2H2BEQ16778 126 aa10.51□□□□□ -0.73
PCDHGA6-201ENST00000517434 SNAI3Q3KNW1 292 aa10.51□□□□□ -0.73
PCDHGA6-201ENST00000517434 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.51□□□□□ -0.73
PCDHGA6-201ENST00000517434 PQLC2Q6ZP29 291 aa10.51□□□□□ -0.73
PCDHGA6-201ENST00000517434 GTF3AQ92664 365 aaKnown RBP10.51□□□□□ -0.73
PCDHGA6-201ENST00000517434 HIST1H2BHQ93079 126 aa10.51□□□□□ -0.73
PCDHGA6-201ENST00000517434 HIST1H2BNQ99877 126 aa10.51□□□□□ -0.73
PCDHGA6-201ENST00000517434 HIST1H2BMQ99879 126 aa10.51□□□□□ -0.73
PCDHGA6-201ENST00000517434 FCGR3AP08637 254 aa10.51□□□□□ -0.73
PCDHGA6-201ENST00000517434 KIR2DL2P43627 348 aaPredicted RBP10.51□□□□□ -0.73
PCDHGA6-201ENST00000517434 CXorf66Q5JRM2 361 aaPredicted RBP10.51□□□□□ -0.73
PCDHGA6-201ENST00000517434 C10orf126Q8N4M7 172 aa10.51□□□□□ -0.73
PCDHGA6-201ENST00000517434 NUDT10Q8NFP7 164 aa10.51□□□□□ -0.73
PCDHGA6-201ENST00000517434 SNRNP40Q96DI7 357 aaKnown RBP10.51□□□□□ -0.73
PCDHGA6-201ENST00000517434 C5orf30Q96GV9 206 aa10.51□□□□□ -0.73
PCDHGA6-201ENST00000517434 F11RQ9Y624 299 aaKnown RBP10.51□□□□□ -0.73
PCDHGA6-201ENST00000517434 PCM1Q15154 2024 aa10.51□□□□□ -0.73
PCDHGA6-201ENST00000517434 A0A1W2PRS3 328 aa10.51□□□□□ -0.73
PCDHGA6-201ENST00000517434 FAM157AC9JC47 383 aa10.51□□□□□ -0.73
PCDHGA6-201ENST00000517434 RPL36A-HNRNPH2H7BZ11 118 aa10.51□□□□□ -0.73
PCDHGA6-201ENST00000517434 CA1P00915 261 aaPredicted RBP10.51□□□□□ -0.73
PCDHGA6-201ENST00000517434 ASAH2BP0C7U1 165 aa10.51□□□□□ -0.73
PCDHGA6-201ENST00000517434 ZNF788Q6ZQV5 615 aa10.51□□□□□ -0.73
PCDHGA6-201ENST00000517434 C5orf66Q9H5L9 145 aa10.51□□□□□ -0.73
PCDHGA6-201ENST00000517434 RNF222A6NCQ9 220 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 CD59P13987 128 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 ADIPOQQ15848 244 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 CEACAM21Q3KPI0 293 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 SPACA3Q8IXA5 215 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 RNASE6Q93091 150 aaKnown RBP10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 TIMP4Q99727 224 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 PSMG3Q9BT73 122 aaPredicted RBP10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 TMEM106BQ9NUM4 274 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 ICE1Q9Y2F5 2266 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 A0A1W2PRD5 423 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 A0A1W2PRF3 423 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 A0A1W2PRM7 423 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 SNRPCP09234 159 aaKnown RBP10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 AMMECR1LQ6DCA0 310 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 ZNF841Q6ZN19 808 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 NEUROG1Q92886 237 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 CTHRC1Q96CG8 243 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 PAXXQ9BUH6 204 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 DICER1Q9UPY3 1922 aaKnown RBP10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 TRBV5-7A0A0A0MS05 114 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 IGHV3-43A0A0B4J1X8 118 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 PIN1P1O15428 100 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 IGHV3-43DP0DP04 118 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 PSG4Q00888 419 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 ZFP36L1Q07352 338 aaKnown RBP10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 PKIBQ9C010 78 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 FAM90A10PA6NDY2 464 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 FAM90A18PA6NE21 464 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 FAM90A16PA6NEW6 464 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 FAM90A20PA6NIJ5 464 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 FAM90A8PA6NJQ4 464 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 FAM90A7PA6NKC0 464 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 MARCH11A6NNE9 402 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 FAM90A22PA8MWA6 464 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 FAM90A12PA8MX19 464 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 FAM90A5PA8MXJ8 464 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 FAM90A23PA8MXZ1 464 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 FAM90A15PP0C7V4 464 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 FAM90A13PP0C7W8 464 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 FAM90A14PP0C7W9 464 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 FAM90A24PP0C7X0 464 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 SPINK2P20155 84 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 ATP1A1-AS1Q5TC04 95 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 TMEM170AQ8WVE7 144 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 SPSB4Q96A44 273 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 HIST1H2BLQ99880 126 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 HDHD3Q9BSH5 251 aaPredicted RBP10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 RNF122Q9H9V4 155 aa10.5□□□□□ -0.73
PCDHGA6-201ENST00000517434 COLCA2A8K830 154 aa10.49□□□□□ -0.73
PCDHGA6-201ENST00000517434 K7N7A8 449 aa10.49□□□□□ -0.73
PCDHGA6-201ENST00000517434 IGKV3-11P04433 115 aa10.49□□□□□ -0.73
PCDHGA6-201ENST00000517434 RIPPLY3P57055 190 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms