RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 TMPPEQ6ZT21 453 aa2.66□□□□□ -1.98
HMGB1P47-201ENST00000511281 HIST2H3AQ71DI3 136 aa2.66□□□□□ -1.98
HMGB1P47-201ENST00000511281 LRRC25Q8N386 305 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P47-201ENST00000511281 OR4K13Q8NH42 304 aa2.66□□□□□ -1.98
HMGB1P47-201ENST00000511281 RNASE6Q93091 150 aaKnown RBP2.66□□□□□ -1.98
HMGB1P47-201ENST00000511281 SLC35B4Q969S0 331 aa2.66□□□□□ -1.98
HMGB1P47-201ENST00000511281 PPP1R14BQ96C90 147 aa2.66□□□□□ -1.98
HMGB1P47-201ENST00000511281 CAPZA3Q96KX2 299 aa2.66□□□□□ -1.98
HMGB1P47-201ENST00000511281 PRAP1Q96NZ9 151 aa2.66□□□□□ -1.98
HMGB1P47-201ENST00000511281 MRPL16Q9NX20 251 aaKnown RBP2.66□□□□□ -1.98
HMGB1P47-201ENST00000511281 TAAR3PQ9P1P4 343 aa2.66□□□□□ -1.98
HMGB1P47-201ENST00000511281 PSORS1C2Q9UIG4 136 aa2.66□□□□□ -1.98
HMGB1P47-201ENST00000511281 AK3Q9UIJ7 227 aa2.66□□□□□ -1.98
HMGB1P47-201ENST00000511281 MAPKBP1O60336 1514 aa2.66□□□□□ -1.98
HMGB1P47-201ENST00000511281 KIAA0586Q9BVV6 1533 aa2.66□□□□□ -1.98
HMGB1P47-201ENST00000511281 DCCP43146 1447 aa2.66□□□□□ -1.98
HMGB1P47-201ENST00000511281 IGHV3-15A0A0B4J1V0 119 aa2.65□□□□□ -1.99
HMGB1P47-201ENST00000511281 A0A1B0GV50 99 aa2.65□□□□□ -1.99
HMGB1P47-201ENST00000511281 LYPLA2O95372 231 aa2.65□□□□□ -1.99
HMGB1P47-201ENST00000511281 RPS17P08708 135 aaKnown RBP2.65□□□□□ -1.99
HMGB1P47-201ENST00000511281 ALOX5APP20292 161 aa2.65□□□□□ -1.99
HMGB1P47-201ENST00000511281 FUSP35637 526 aaKnown RBP eCLIP2.65□□□□□ -1.99
HMGB1P47-201ENST00000511281 HAAOP46952 286 aa2.65□□□□□ -1.99
HMGB1P47-201ENST00000511281 RBM11P57052 281 aaKnown RBP2.65□□□□□ -1.99
HMGB1P47-201ENST00000511281 RANP62826 216 aaKnown RBP2.65□□□□□ -1.99
HMGB1P47-201ENST00000511281 PSG4Q00888 419 aa2.65□□□□□ -1.99
HMGB1P47-201ENST00000511281 FAM201AQ5SY85 155 aa2.65□□□□□ -1.99
HMGB1P47-201ENST00000511281 CCDC121Q6ZUS5 278 aa2.65□□□□□ -1.99
HMGB1P47-201ENST00000511281 TRAPPC5Q8IUR0 188 aa2.65□□□□□ -1.99
HMGB1P47-201ENST00000511281 CLDND2Q8NHS1 167 aa2.65□□□□□ -1.99
HMGB1P47-201ENST00000511281 TMEM222Q9H0R3 208 aa2.65□□□□□ -1.99
HMGB1P47-201ENST00000511281 TXNL4BQ9NX01 149 aaKnown RBP2.65□□□□□ -1.99
HMGB1P47-201ENST00000511281 VPS29Q9UBQ0 182 aa2.65□□□□□ -1.99
HMGB1P47-201ENST00000511281 COQ4Q9Y3A0 265 aa2.65□□□□□ -1.99
HMGB1P47-201ENST00000511281 PXMP4Q9Y6I8 212 aa2.65□□□□□ -1.99
HMGB1P47-201ENST00000511281 VPS8Q8N3P4 1428 aa2.65□□□□□ -1.99
HMGB1P47-201ENST00000511281 TRPM6Q9BX84 2022 aa2.64□□□□□ -1.99
HMGB1P47-201ENST00000511281 KDM6BO15054 1643 aa2.64□□□□□ -1.99
HMGB1P47-201ENST00000511281 ABCC12Q96J65 1359 aa2.64□□□□□ -1.99
HMGB1P47-201ENST00000511281 CUL7Q14999 1698 aa2.64□□□□□ -1.99
HMGB1P47-201ENST00000511281 A0A087WUU8 490 aa2.64□□□□□ -1.99
HMGB1P47-201ENST00000511281 OR11H12B2RN74 326 aa2.64□□□□□ -1.99
HMGB1P47-201ENST00000511281 UBFD1O14562 309 aaKnown RBP2.64□□□□□ -1.99
HMGB1P47-201ENST00000511281 SOD1P00441 154 aa2.64□□□□□ -1.99
HMGB1P47-201ENST00000511281 MAP2K4P45985 399 aa2.64□□□□□ -1.99
HMGB1P47-201ENST00000511281 RWDD2BP57060 319 aa2.64□□□□□ -1.99
HMGB1P47-201ENST00000511281 ERVS71-1P61550 626 aa2.64□□□□□ -1.99
HMGB1P47-201ENST00000511281 AESQ08117 197 aa2.64□□□□□ -1.99
HMGB1P47-201ENST00000511281 PMAIP1Q13794 54 aa2.64□□□□□ -1.99
HMGB1P47-201ENST00000511281 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P47-201ENST00000511281 UMODL1-AS1Q8N2C9 162 aa2.64□□□□□ -1.99
HMGB1P47-201ENST00000511281 SLC22A24Q8N4F4 322 aa2.64□□□□□ -1.99
HMGB1P47-201ENST00000511281 OR11H2Q8NH07 326 aa2.64□□□□□ -1.99
HMGB1P47-201ENST00000511281 SGMS2Q8NHU3 365 aa2.64□□□□□ -1.99
HMGB1P47-201ENST00000511281 OR52E6Q96RD3 313 aa2.64□□□□□ -1.99
HMGB1P47-201ENST00000511281 AICDAQ9GZX7 198 aa2.64□□□□□ -1.99
HMGB1P47-201ENST00000511281 PTPRGP23470 1445 aa2.64□□□□□ -1.99
HMGB1P47-201ENST00000511281 ABCC2Q92887 1545 aa2.63□□□□□ -1.99
HMGB1P47-201ENST00000511281 DISP1Q96F81 1524 aa2.63□□□□□ -1.99
HMGB1P47-201ENST00000511281 CACNA1SQ13698 1873 aa2.63□□□□□ -1.99
HMGB1P47-201ENST00000511281 IQGAP2Q13576 1575 aa2.63□□□□□ -1.99
HMGB1P47-201ENST00000511281 IGKV3D-11A0A0A0MRZ8 115 aa2.63□□□□□ -1.99
HMGB1P47-201ENST00000511281 TGIF2-C20orf24A0A0A6YYL0 155 aa2.63□□□□□ -1.99
HMGB1P47-201ENST00000511281 OR5K4A6NMS3 321 aa2.63□□□□□ -1.99
HMGB1P47-201ENST00000511281 H3BPC8 53 aa2.63□□□□□ -1.99
HMGB1P47-201ENST00000511281 COX7A2LO14548 114 aa2.63□□□□□ -1.99
HMGB1P47-201ENST00000511281 IGHV1-69P01742 117 aa2.63□□□□□ -1.99
HMGB1P47-201ENST00000511281 CTSGP08311 255 aa2.63□□□□□ -1.99
HMGB1P47-201ENST00000511281 GZMBP10144 247 aa2.63□□□□□ -1.99
HMGB1P47-201ENST00000511281 CD24P25063 80 aa2.63□□□□□ -1.99
HMGB1P47-201ENST00000511281 AP3S2P59780 193 aa2.63□□□□□ -1.99
HMGB1P47-201ENST00000511281 IFITM2Q01629 132 aa2.63□□□□□ -1.99
HMGB1P47-201ENST00000511281 TNFRSF9Q07011 255 aa2.63□□□□□ -1.99
HMGB1P47-201ENST00000511281 LCE3AQ5TA76 89 aa2.63□□□□□ -1.99
HMGB1P47-201ENST00000511281 MSRB3Q8IXL7 192 aa2.63□□□□□ -1.99
HMGB1P47-201ENST00000511281 DAND5Q8N907 189 aa2.63□□□□□ -1.99
HMGB1P47-201ENST00000511281 CNEP1R1Q8N9A8 125 aa2.63□□□□□ -1.99
HMGB1P47-201ENST00000511281 LHFPL5Q8TAF8 219 aa2.63□□□□□ -1.99
HMGB1P47-201ENST00000511281 CHMP6Q96FZ7 201 aa2.63□□□□□ -1.99
HMGB1P47-201ENST00000511281 ZNF471Q9BX82 626 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P47-201ENST00000511281 GPR84Q9NQS5 396 aa2.63□□□□□ -1.99
HMGB1P47-201ENST00000511281 FAM215AQ9Y5M1 114 aa2.63□□□□□ -1.99
HMGB1P47-201ENST00000511281 KIF21BO75037 1637 aa2.63□□□□□ -1.99
HMGB1P47-201ENST00000511281 PPRC1Q5VV67 1664 aaKnown RBP2.63□□□□□ -1.99
HMGB1P47-201ENST00000511281 UACAQ9BZF9 1416 aa2.62□□□□□ -1.99
HMGB1P47-201ENST00000511281 CLDN24A6NM45 220 aa2.62□□□□□ -1.99
HMGB1P47-201ENST00000511281 TMEM114B3SHH9 223 aa2.62□□□□□ -1.99
HMGB1P47-201ENST00000511281 FAM228BP0C875 321 aa2.62□□□□□ -1.99
HMGB1P47-201ENST00000511281 GABRA2P47869 451 aa2.62□□□□□ -1.99
HMGB1P47-201ENST00000511281 SERPINB10P48595 397 aa2.62□□□□□ -1.99
HMGB1P47-201ENST00000511281 SPCS3P61009 180 aa2.62□□□□□ -1.99
HMGB1P47-201ENST00000511281 AKIRIN2Q53H80 203 aa2.62□□□□□ -1.99
HMGB1P47-201ENST00000511281 TNFAIP8L3Q5GJ75 292 aa2.62□□□□□ -1.99
HMGB1P47-201ENST00000511281 TMEM31Q5JXX7 168 aa2.62□□□□□ -1.99
HMGB1P47-201ENST00000511281 SMARCD3Q6STE5 483 aa2.62□□□□□ -1.99
HMGB1P47-201ENST00000511281 SPATA12Q7Z6I5 190 aa2.62□□□□□ -1.99
HMGB1P47-201ENST00000511281 CLDN22Q8N7P3 220 aa2.62□□□□□ -1.99
HMGB1P47-201ENST00000511281 OR1L8Q8NGR8 309 aa2.62□□□□□ -1.99
HMGB1P47-201ENST00000511281 SMCR5Q8TEV8 140 aa2.62□□□□□ -1.99
HMGB1P47-201ENST00000511281 RAB2BQ8WUD1 216 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms