RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 TMEM11P17152 192 aa14.68□□□□□ -0.06
HMGXB3-201ENST00000502717 RPL31P62899 125 aaKnown RBP14.68□□□□□ -0.06
HMGXB3-201ENST00000502717 FXYD3Q14802 87 aa14.68□□□□□ -0.06
HMGXB3-201ENST00000502717 ATOH7Q8N100 152 aa14.68□□□□□ -0.06
HMGXB3-201ENST00000502717 FAM216AQ8WUB2 273 aa14.68□□□□□ -0.06
HMGXB3-201ENST00000502717 IMMP2LQ96T52 175 aa14.68□□□□□ -0.06
HMGXB3-201ENST00000502717 hADV38S2A0JD32 116 aa14.67□□□□□ -0.06
HMGXB3-201ENST00000502717 CA2P00918 260 aa14.67□□□□□ -0.06
HMGXB3-201ENST00000502717 SOX8P57073 446 aa14.67□□□□□ -0.06
HMGXB3-201ENST00000502717 QRFPP83859 136 aa14.67□□□□□ -0.06
HMGXB3-201ENST00000502717 GBGT1Q8N5D6 347 aa14.67□□□□□ -0.06
HMGXB3-201ENST00000502717 GAL3ST2Q9H3Q3 398 aa14.67□□□□□ -0.06
HMGXB3-201ENST00000502717 CEP250Q9BV73 2442 aa14.67□□□□□ -0.06
HMGXB3-201ENST00000502717 MARCH11A6NNE9 402 aa14.67□□□□□ -0.06
HMGXB3-201ENST00000502717 CRYBB3P26998 211 aa14.67□□□□□ -0.06
HMGXB3-201ENST00000502717 GLRX2Q9NS18 164 aa14.67□□□□□ -0.06
HMGXB3-201ENST00000502717 IGHV5-10-1A0A0J9YXX1 117 aa14.67□□□□□ -0.06
HMGXB3-201ENST00000502717 hCG_38984A0A1B0GV85 526 aa14.67□□□□□ -0.06
HMGXB3-201ENST00000502717 RBP4P02753 201 aa14.67□□□□□ -0.06
HMGXB3-201ENST00000502717 SMIM12Q96EX1 92 aa14.67□□□□□ -0.06
HMGXB3-201ENST00000502717 OR51B2Q9Y5P1 312 aa14.67□□□□□ -0.06
HMGXB3-201ENST00000502717 HEATR5BQ9P2D3 2071 aa14.67□□□□□ -0.06
HMGXB3-201ENST00000502717 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.67□□□□□ -0.06
HMGXB3-201ENST00000502717 SERF1AO75920 110 aa14.67□□□□□ -0.06
HMGXB3-201ENST00000502717 PRSS1P07477 247 aa14.67□□□□□ -0.06
HMGXB3-201ENST00000502717 LINC00614P0C842 121 aa14.67□□□□□ -0.06
HMGXB3-201ENST00000502717 CTSSP25774 331 aa14.67□□□□□ -0.06
HMGXB3-201ENST00000502717 ZNF137PP52743 207 aa14.67□□□□□ -0.06
HMGXB3-201ENST00000502717 FZR1Q9UM11 496 aa14.67□□□□□ -0.06
HMGXB3-201ENST00000502717 LYZL6O75951 148 aa14.66□□□□□ -0.06
HMGXB3-201ENST00000502717 COX5BP10606 129 aa14.66□□□□□ -0.06
HMGXB3-201ENST00000502717 LYRM7Q5U5X0 104 aa14.66□□□□□ -0.06
HMGXB3-201ENST00000502717 OR1L1Q8NH94 360 aa14.66□□□□□ -0.06
HMGXB3-201ENST00000502717 RAB1CQ92928 201 aa14.66□□□□□ -0.06
HMGXB3-201ENST00000502717 CEACAM18A8MTB9 384 aa14.66□□□□□ -0.06
HMGXB3-201ENST00000502717 LINC00869P0C866 280 aa14.66□□□□□ -0.06
HMGXB3-201ENST00000502717 SLC25A40Q8TBP6 338 aa14.66□□□□□ -0.06
HMGXB3-201ENST00000502717 SFXN3Q9BWM7 321 aa14.66□□□□□ -0.06
HMGXB3-201ENST00000502717 CLDN16Q9Y5I7 305 aa14.66□□□□□ -0.06
HMGXB3-201ENST00000502717 PLXNA3P51805 1871 aa14.66□□□□□ -0.06
HMGXB3-201ENST00000502717 PRR33A8MZF0 331 aa14.66□□□□□ -0.06
HMGXB3-201ENST00000502717 OR8A1Q8NGG7 326 aa14.66□□□□□ -0.06
HMGXB3-201ENST00000502717 TNFSF13O75888 250 aa14.66□□□□□ -0.06
HMGXB3-201ENST00000502717 ZNF319Q9P2F9 582 aa14.66□□□□□ -0.06
HMGXB3-201ENST00000502717 CDX4O14627 284 aaPredicted RBP14.65□□□□□ -0.06
HMGXB3-201ENST00000502717 MAS1LP35410 378 aa14.65□□□□□ -0.06
HMGXB3-201ENST00000502717 OR8B3Q8NGG8 313 aa14.65□□□□□ -0.06
HMGXB3-201ENST00000502717 WNT10AQ9GZT5 417 aa14.65□□□□□ -0.06
HMGXB3-201ENST00000502717 WNT5AP41221 380 aa14.65□□□□□ -0.06
HMGXB3-201ENST00000502717 PLP1P60201 277 aa14.65□□□□□ -0.06
HMGXB3-201ENST00000502717 ZNF664Q8N3J9 261 aa14.65□□□□□ -0.06
HMGXB3-201ENST00000502717 C19orf24Q9BVV8 132 aa14.65□□□□□ -0.06
HMGXB3-201ENST00000502717 HS3ST3B1Q9Y662 390 aa14.65□□□□□ -0.06
HMGXB3-201ENST00000502717 FREM3P0C091 2139 aa14.65□□□□□ -0.06
HMGXB3-201ENST00000502717 SYNGR3O43761 229 aa14.65□□□□□ -0.06
HMGXB3-201ENST00000502717 SPINK14Q6IE38 97 aa14.65□□□□□ -0.06
HMGXB3-201ENST00000502717 TEX29Q8N6K0 151 aa14.65□□□□□ -0.06
HMGXB3-201ENST00000502717 OR1L8Q8NGR8 309 aa14.65□□□□□ -0.06
HMGXB3-201ENST00000502717 ALKBH7Q9BT30 221 aaPredicted RBP14.65□□□□□ -0.06
HMGXB3-201ENST00000502717 HLA-DRB1P01911 266 aa14.65□□□□□ -0.06
HMGXB3-201ENST00000502717 CENPWQ5EE01 88 aa14.65□□□□□ -0.06
HMGXB3-201ENST00000502717 KLF3P57682 345 aaPredicted RBP14.64□□□□□ -0.07
HMGXB3-201ENST00000502717 SAPCD1Q5SSQ6 148 aa14.64□□□□□ -0.07
HMGXB3-201ENST00000502717 MRPL52Q86TS9 123 aaKnown RBP14.64□□□□□ -0.07
HMGXB3-201ENST00000502717 VOPP1Q96AW1 172 aa14.64□□□□□ -0.07
HMGXB3-201ENST00000502717 KCNS1Q96KK3 526 aa14.64□□□□□ -0.07
HMGXB3-201ENST00000502717 TMEM70Q9BUB7 260 aa14.64□□□□□ -0.07
HMGXB3-201ENST00000502717 PEF1Q9UBV8 284 aaKnown RBP14.64□□□□□ -0.07
HMGXB3-201ENST00000502717 SCN8AQ9UQD0 1980 aa14.64□□□□□ -0.07
HMGXB3-201ENST00000502717 ACACAQ13085 2346 aa14.64□□□□□ -0.07
HMGXB3-201ENST00000502717 SLC17A3O00476 420 aa14.64□□□□□ -0.07
HMGXB3-201ENST00000502717 PPIHO43447 177 aaKnown RBP14.64□□□□□ -0.07
HMGXB3-201ENST00000502717 ATP5G3P48201 142 aa14.64□□□□□ -0.07
HMGXB3-201ENST00000502717 PMCHL2Q9BQD1 86 aa14.64□□□□□ -0.07
HMGXB3-201ENST00000502717 GZMBP10144 247 aa14.64□□□□□ -0.07
HMGXB3-201ENST00000502717 FABP2P12104 132 aa14.64□□□□□ -0.07
HMGXB3-201ENST00000502717 MDP1Q86V88 176 aa14.64□□□□□ -0.07
HMGXB3-201ENST00000502717 LYZL4Q96KX0 146 aa14.64□□□□□ -0.07
HMGXB3-201ENST00000502717 C8orf88P0DMB2 117 aa14.64□□□□□ -0.07
HMGXB3-201ENST00000502717 ADMP35318 185 aa14.64□□□□□ -0.07
HMGXB3-201ENST00000502717 RSPO4Q2I0M5 234 aaPredicted RBP14.64□□□□□ -0.07
HMGXB3-201ENST00000502717 CALHM1Q8IU99 346 aa14.64□□□□□ -0.07
HMGXB3-201ENST00000502717 C5orf17Q8NAS9 161 aa14.64□□□□□ -0.07
HMGXB3-201ENST00000502717 NRN1Q9NPD7 142 aa14.64□□□□□ -0.07
HMGXB3-201ENST00000502717 A8MWP6 167 aa14.63□□□□□ -0.07
HMGXB3-201ENST00000502717 C3orf80F5H4A9 247 aa14.63□□□□□ -0.07
HMGXB3-201ENST00000502717 NDUFB3O43676 98 aa14.63□□□□□ -0.07
HMGXB3-201ENST00000502717 SLC25A53Q5H9E4 307 aa14.63□□□□□ -0.07
HMGXB3-201ENST00000502717 FBXW9Q5XUX1 488 aa14.63□□□□□ -0.07
HMGXB3-201ENST00000502717 VWCEQ96DN2 955 aa14.63□□□□□ -0.07
HMGXB3-201ENST00000502717 RTN4RQ9BZR6 473 aa14.63□□□□□ -0.07
HMGXB3-201ENST00000502717 ODAMA1E959 279 aa14.63□□□□□ -0.07
HMGXB3-201ENST00000502717 TFF3Q07654 80 aa14.63□□□□□ -0.07
HMGXB3-201ENST00000502717 LRRC10Q5BKY1 277 aa14.63□□□□□ -0.07
HMGXB3-201ENST00000502717 ZNF83P51522 516 aa14.63□□□□□ -0.07
HMGXB3-201ENST00000502717 LYZP61626 148 aa14.63□□□□□ -0.07
HMGXB3-201ENST00000502717 DCAF10Q5QP82 559 aa14.63□□□□□ -0.07
HMGXB3-201ENST00000502717 OR51G1Q8NGK1 321 aa14.63□□□□□ -0.07
HMGXB3-201ENST00000502717 HSPE1P61604 102 aaKnown RBP14.62□□□□□ -0.07
HMGXB3-201ENST00000502717 SELENOTP62341 195 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms