RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 SLC7A5P1Q8MH63 180 aa8.41□□□□□ -1.06
HDAC3-214ENST00000495485 OR1S2Q8NGQ3 325 aa8.41□□□□□ -1.06
HDAC3-214ENST00000495485 ZNF596Q8TC21 504 aa8.41□□□□□ -1.06
HDAC3-214ENST00000495485 PATZ1Q9HBE1 687 aaKnown RBP8.41□□□□□ -1.06
HDAC3-214ENST00000495485 FKBP11Q9NYL4 201 aa8.41□□□□□ -1.06
HDAC3-214ENST00000495485 PSENENQ9NZ42 101 aa8.41□□□□□ -1.06
HDAC3-214ENST00000495485 CTSZQ9UBR2 303 aa8.41□□□□□ -1.06
HDAC3-214ENST00000495485 SAA2-SAA4A0A096LPE2 208 aa8.4□□□□□ -1.06
HDAC3-214ENST00000495485 MSGN1A6NI15 193 aa8.4□□□□□ -1.06
HDAC3-214ENST00000495485 LYNX1G3V0Z9 82 aa8.4□□□□□ -1.06
HDAC3-214ENST00000495485 TXNL1O43396 289 aa8.4□□□□□ -1.06
HDAC3-214ENST00000495485 RAMP3O60896 148 aa8.4□□□□□ -1.06
HDAC3-214ENST00000495485 IFNA5P01569 189 aa8.4□□□□□ -1.06
HDAC3-214ENST00000495485 SAA2P0DJI9 122 aaPredicted RBP8.4□□□□□ -1.06
HDAC3-214ENST00000495485 IGHV1-8P0DP01 117 aa8.4□□□□□ -1.06
HDAC3-214ENST00000495485 LYNX1P0DP58 116 aa8.4□□□□□ -1.06
HDAC3-214ENST00000495485 SULT1A1P50225 295 aa8.4□□□□□ -1.06
HDAC3-214ENST00000495485 RAB5CP51148 216 aa8.4□□□□□ -1.06
HDAC3-214ENST00000495485 RAB13P51153 203 aa8.4□□□□□ -1.06
HDAC3-214ENST00000495485 TNFRSF9Q07011 255 aa8.4□□□□□ -1.06
HDAC3-214ENST00000495485 ATP6V1FQ16864 119 aa8.4□□□□□ -1.06
HDAC3-214ENST00000495485 RPL39P5Q59GN2 51 aa8.4□□□□□ -1.06
HDAC3-214ENST00000495485 OR2B11Q5JQS5 317 aa8.4□□□□□ -1.06
HDAC3-214ENST00000495485 WDR25Q64LD2 544 aaPredicted RBP8.4□□□□□ -1.06
HDAC3-214ENST00000495485 TCF23Q7RTU1 214 aa8.4□□□□□ -1.06
HDAC3-214ENST00000495485 ABHD12Q8N2K0 398 aa8.4□□□□□ -1.06
HDAC3-214ENST00000495485 TMEM252Q8N6L7 170 aa8.4□□□□□ -1.06
HDAC3-214ENST00000495485 OR13D1Q8NGV5 346 aa8.4□□□□□ -1.06
HDAC3-214ENST00000495485 OR52E5Q8NH55 327 aa8.4□□□□□ -1.06
HDAC3-214ENST00000495485 VSTM2AQ8TAG5 236 aa8.4□□□□□ -1.06
HDAC3-214ENST00000495485 OSR1Q8TAX0 266 aaPredicted RBP8.4□□□□□ -1.06
HDAC3-214ENST00000495485 C10orf105Q8TEF2 133 aa8.4□□□□□ -1.06
HDAC3-214ENST00000495485 GNPNAT1Q96EK6 184 aaPredicted RBP8.4□□□□□ -1.06
HDAC3-214ENST00000495485 SAT2Q96F10 170 aaPredicted RBP8.4□□□□□ -1.06
HDAC3-214ENST00000495485 TSNAXQ99598 290 aaKnown RBP8.4□□□□□ -1.06
HDAC3-214ENST00000495485 PCGF1Q9BSM1 259 aa8.4□□□□□ -1.06
HDAC3-214ENST00000495485 SSBP3Q9BWW4 388 aaPredicted RBP8.4□□□□□ -1.06
HDAC3-214ENST00000495485 MAGT1Q9H0U3 335 aa8.4□□□□□ -1.06
HDAC3-214ENST00000495485 TMEM133Q9H2Q1 129 aa8.4□□□□□ -1.06
HDAC3-214ENST00000495485 HIPK2Q9H2X6 1198 aa8.4□□□□□ -1.06
HDAC3-214ENST00000495485 ENY2Q9NPA8 101 aa8.4□□□□□ -1.06
HDAC3-214ENST00000495485 SLC35D1Q9NTN3 355 aa8.4□□□□□ -1.06
HDAC3-214ENST00000495485 HSPB7Q9UBY9 170 aa8.4□□□□□ -1.06
HDAC3-214ENST00000495485 FBXL17Q9UF56 701 aa8.4□□□□□ -1.06
HDAC3-214ENST00000495485 SONP18583 2426 aaKnown RBP8.4□□□□□ -1.07
HDAC3-214ENST00000495485 SETD2Q9BYW2 2564 aaPredicted RBP8.39□□□□□ -1.07
HDAC3-214ENST00000495485 LOC105371242A0A075B767 164 aa8.39□□□□□ -1.07
HDAC3-214ENST00000495485 A0A0G2JRQ6 117 aa8.39□□□□□ -1.07
HDAC3-214ENST00000495485 FAM24AA6NFZ4 105 aa8.39□□□□□ -1.07
HDAC3-214ENST00000495485 CEBPZOSA8MTT3 80 aa8.39□□□□□ -1.07
HDAC3-214ENST00000495485 M0R1W7 72 aa8.39□□□□□ -1.07
HDAC3-214ENST00000495485 IFNA17P01571 189 aa8.39□□□□□ -1.07
HDAC3-214ENST00000495485 IGHV3-7P01780 117 aa8.39□□□□□ -1.07
HDAC3-214ENST00000495485 SEC11BP0C7V7 166 aa8.39□□□□□ -1.07
HDAC3-214ENST00000495485 CCL3L1P16619 93 aa8.39□□□□□ -1.07
HDAC3-214ENST00000495485 SPCS3P61009 180 aa8.39□□□□□ -1.07
HDAC3-214ENST00000495485 LOXL1Q08397 574 aaPredicted RBP8.39□□□□□ -1.07
HDAC3-214ENST00000495485 AVPI1Q5T686 147 aa8.39□□□□□ -1.07
HDAC3-214ENST00000495485 SLC25A24Q6NUK1 477 aa8.39□□□□□ -1.07
HDAC3-214ENST00000495485 ZNF841Q6ZN19 808 aa8.39□□□□□ -1.07
HDAC3-214ENST00000495485 ZNF833PQ6ZTB9 187 aa8.39□□□□□ -1.07
HDAC3-214ENST00000495485 DDB2Q92466 427 aa8.39□□□□□ -1.07
HDAC3-214ENST00000495485 C5orf30Q96GV9 206 aa8.39□□□□□ -1.07
HDAC3-214ENST00000495485 CLEC7AQ9BXN2 247 aa8.39□□□□□ -1.07
HDAC3-214ENST00000495485 CYTL1Q9NRR1 136 aa8.39□□□□□ -1.07
HDAC3-214ENST00000495485 NUP50Q9UKX7 468 aa8.39□□□□□ -1.07
HDAC3-214ENST00000495485 PRNDQ9UKY0 176 aa8.39□□□□□ -1.07
HDAC3-214ENST00000495485 STRAPQ9Y3F4 350 aaKnown RBP8.39□□□□□ -1.07
HDAC3-214ENST00000495485 MALRD1Q5VYJ5 2156 aa8.38□□□□□ -1.07
HDAC3-214ENST00000495485 CR1P17927 2039 aa8.38□□□□□ -1.07
HDAC3-214ENST00000495485 A0A1W2PPE3 182 aa8.38□□□□□ -1.07
HDAC3-214ENST00000495485 VWC2LB2RUY7 222 aa8.38□□□□□ -1.07
HDAC3-214ENST00000495485 SLC31A2O15432 143 aa8.38□□□□□ -1.07
HDAC3-214ENST00000495485 MMP23AO75900 390 aa8.38□□□□□ -1.07
HDAC3-214ENST00000495485 CRYZL1O95825 349 aa8.38□□□□□ -1.07
HDAC3-214ENST00000495485 FGF2P09038 288 aa8.38□□□□□ -1.07
HDAC3-214ENST00000495485 P0C879 139 aa8.38□□□□□ -1.07
HDAC3-214ENST00000495485 CEACAM3P40198 252 aa8.38□□□□□ -1.07
HDAC3-214ENST00000495485 ZNF137PP52743 207 aa8.38□□□□□ -1.07
HDAC3-214ENST00000495485 DLX6P56179 175 aa8.38□□□□□ -1.07
HDAC3-214ENST00000495485 NHLH2Q02577 135 aa8.38□□□□□ -1.07
HDAC3-214ENST00000495485 POU2AF1Q16633 256 aa8.38□□□□□ -1.07
HDAC3-214ENST00000495485 RPL7L1Q6DKI1 246 aaKnown RBP8.38□□□□□ -1.07
HDAC3-214ENST00000495485 FAM53AQ6NSI3 398 aaPredicted RBP8.38□□□□□ -1.07
HDAC3-214ENST00000495485 Q6ZRM9 215 aa8.38□□□□□ -1.07
HDAC3-214ENST00000495485 C1orf122Q6ZSJ8 110 aa8.38□□□□□ -1.07
HDAC3-214ENST00000495485 ZNF429Q86V71 674 aa8.38□□□□□ -1.07
HDAC3-214ENST00000495485 COMMD7Q86VX2 200 aa8.38□□□□□ -1.07
HDAC3-214ENST00000495485 PDPNQ86YL7 162 aa8.38□□□□□ -1.07
HDAC3-214ENST00000495485 TGIF2LXQ8IUE1 241 aa8.38□□□□□ -1.07
HDAC3-214ENST00000495485 KRTAP1-3Q8IUG1 177 aa8.38□□□□□ -1.07
HDAC3-214ENST00000495485 ODF3L1Q8IXM7 274 aa8.38□□□□□ -1.07
HDAC3-214ENST00000495485 LY6G5BQ8NDX9 201 aa8.38□□□□□ -1.07
HDAC3-214ENST00000495485 BEND2Q8NDZ0 799 aa8.38□□□□□ -1.07
HDAC3-214ENST00000495485 OR4C13Q8NGP0 309 aa8.38□□□□□ -1.07
HDAC3-214ENST00000495485 OR4A5Q8NH83 315 aa8.38□□□□□ -1.07
HDAC3-214ENST00000495485 SCGB1C1Q8TD33 95 aa8.38□□□□□ -1.07
HDAC3-214ENST00000495485 DTD1Q8TEA8 209 aa8.38□□□□□ -1.07
HDAC3-214ENST00000495485 LEAP2Q969E1 77 aa8.38□□□□□ -1.07
HDAC3-214ENST00000495485 LHX4Q969G2 390 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms