RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 JPT1Q9UK76 154 aa13.37□□□□□ -0.27
SEMA4D-220ENST00000492386 PPP5D1E7EU14 171 aa13.36□□□□□ -0.27
SEMA4D-220ENST00000492386 TNFSF13O75888 250 aa13.36□□□□□ -0.27
SEMA4D-220ENST00000492386 SPCS3P61009 180 aa13.36□□□□□ -0.27
SEMA4D-220ENST00000492386 GAMTQ14353 236 aa13.36□□□□□ -0.27
SEMA4D-220ENST00000492386 TRIP6Q15654 476 aaKnown RBP13.36□□□□□ -0.27
SEMA4D-220ENST00000492386 PRAMEF5Q5TYX0 476 aa13.36□□□□□ -0.27
SEMA4D-220ENST00000492386 RAB1CQ92928 201 aa13.36□□□□□ -0.27
SEMA4D-220ENST00000492386 MEGF10Q96KG7 1140 aa13.36□□□□□ -0.27
SEMA4D-220ENST00000492386 OPN3Q9H1Y3 402 aaPredicted RBP13.36□□□□□ -0.27
SEMA4D-220ENST00000492386 ZNF71Q9NQZ8 489 aaPredicted RBP13.36□□□□□ -0.27
SEMA4D-220ENST00000492386 GFOD1Q9NXC2 390 aa13.36□□□□□ -0.27
SEMA4D-220ENST00000492386 M0R1X1 148 aa13.36□□□□□ -0.27
SEMA4D-220ENST00000492386 YPEL1O60688 119 aa13.36□□□□□ -0.27
SEMA4D-220ENST00000492386 GGCTO75223 188 aaKnown RBP13.36□□□□□ -0.27
SEMA4D-220ENST00000492386 CD82P27701 267 aa13.36□□□□□ -0.27
SEMA4D-220ENST00000492386 VDAC2P45880 294 aaPredicted RBP13.36□□□□□ -0.27
SEMA4D-220ENST00000492386 ZNF134P52741 427 aa13.36□□□□□ -0.27
SEMA4D-220ENST00000492386 LOXL3P58215 753 aa13.36□□□□□ -0.27
SEMA4D-220ENST00000492386 CLEC12BQ2HXU8 276 aa13.36□□□□□ -0.27
SEMA4D-220ENST00000492386 CR1LQ2VPA4 569 aa13.36□□□□□ -0.27
SEMA4D-220ENST00000492386 RPL39P5Q59GN2 51 aa13.36□□□□□ -0.27
SEMA4D-220ENST00000492386 COA6Q5JTJ3 125 aaKnown RBP13.36□□□□□ -0.27
SEMA4D-220ENST00000492386 VKORC1L1Q8N0U8 176 aa13.36□□□□□ -0.27
SEMA4D-220ENST00000492386 SARAFQ96BY9 339 aa13.36□□□□□ -0.27
SEMA4D-220ENST00000492386 YPEL2Q96QA6 119 aa13.36□□□□□ -0.27
SEMA4D-220ENST00000492386 LOC400499M0QZD8 3231 aa13.35□□□□□ -0.27
SEMA4D-220ENST00000492386 A0A1W2PPQ1 181 aa13.35□□□□□ -0.27
SEMA4D-220ENST00000492386 PRSS46E5RG02 174 aa13.35□□□□□ -0.27
SEMA4D-220ENST00000492386 RRHO14718 337 aa13.35□□□□□ -0.27
SEMA4D-220ENST00000492386 LY86O95711 162 aa13.35□□□□□ -0.27
SEMA4D-220ENST00000492386 CRYAAP02489 173 aa13.35□□□□□ -0.27
SEMA4D-220ENST00000492386 EDDM3BP56851 147 aa13.35□□□□□ -0.27
SEMA4D-220ENST00000492386 FAM3BP58499 235 aaPredicted RBP13.35□□□□□ -0.27
SEMA4D-220ENST00000492386 GNB1P62873 340 aa13.35□□□□□ -0.27
SEMA4D-220ENST00000492386 MZT1Q08AG7 82 aa13.35□□□□□ -0.27
SEMA4D-220ENST00000492386 PDLIM3Q53GG5 364 aaPredicted RBP13.35□□□□□ -0.27
SEMA4D-220ENST00000492386 OR1P1Q8NH06 330 aa13.35□□□□□ -0.27
SEMA4D-220ENST00000492386 OR52E5Q8NH55 327 aa13.35□□□□□ -0.27
SEMA4D-220ENST00000492386 OR4A16Q8NH70 328 aa13.35□□□□□ -0.27
SEMA4D-220ENST00000492386 FAM234AQ9H0X4 552 aa13.35□□□□□ -0.27
SEMA4D-220ENST00000492386 DUSP13Q9UII6 198 aa13.35□□□□□ -0.27
SEMA4D-220ENST00000492386 NBEAQ8NFP9 2946 aa13.35□□□□□ -0.27
SEMA4D-220ENST00000492386 MGST3O14880 152 aa13.35□□□□□ -0.27
SEMA4D-220ENST00000492386 RBFOX2O43251 390 aaKnown RBP eCLIP13.35□□□□□ -0.27
SEMA4D-220ENST00000492386 CGAP01215 116 aa13.35□□□□□ -0.27
SEMA4D-220ENST00000492386 IFNA10P01566 189 aa13.35□□□□□ -0.27
SEMA4D-220ENST00000492386 SRP14P37108 136 aaKnown RBP13.35□□□□□ -0.27
SEMA4D-220ENST00000492386 ATP5G3P48201 142 aa13.35□□□□□ -0.27
SEMA4D-220ENST00000492386 P2RY6Q15077 328 aa13.35□□□□□ -0.27
SEMA4D-220ENST00000492386 TREML4Q6UXN2 200 aa13.35□□□□□ -0.27
SEMA4D-220ENST00000492386 LRP11Q86VZ4 500 aa13.35□□□□□ -0.27
SEMA4D-220ENST00000492386 STARD4Q96DR4 205 aa13.35□□□□□ -0.27
SEMA4D-220ENST00000492386 IFI27L2Q9H2X8 130 aa13.35□□□□□ -0.27
SEMA4D-220ENST00000492386 DKK4Q9UBT3 224 aa13.35□□□□□ -0.27
SEMA4D-220ENST00000492386 IGHV3OR15-7A0A075B7D8 119 aa13.34□□□□□ -0.27
SEMA4D-220ENST00000492386 TRAV3A0A0B4J244 114 aa13.34□□□□□ -0.27
SEMA4D-220ENST00000492386 PDE6DO43924 150 aa13.34□□□□□ -0.27
SEMA4D-220ENST00000492386 MPDU1O75352 247 aa13.34□□□□□ -0.27
SEMA4D-220ENST00000492386 IGHV3-13P01766 116 aa13.34□□□□□ -0.27
SEMA4D-220ENST00000492386 IGHV3-7P01780 117 aa13.34□□□□□ -0.27
SEMA4D-220ENST00000492386 AMBPP02760 352 aa13.34□□□□□ -0.27
SEMA4D-220ENST00000492386 BMP5P22003 454 aa13.34□□□□□ -0.27
SEMA4D-220ENST00000492386 UBE2G2P60604 165 aa13.34□□□□□ -0.27
SEMA4D-220ENST00000492386 RELBQ01201 579 aa13.34□□□□□ -0.27
SEMA4D-220ENST00000492386 SPRNQ5BIV9 151 aa13.34□□□□□ -0.27
SEMA4D-220ENST00000492386 BHLHA15Q7RTS1 189 aaPredicted RBP13.34□□□□□ -0.27
SEMA4D-220ENST00000492386 LINC01551Q86U37 167 aa13.34□□□□□ -0.27
SEMA4D-220ENST00000492386 C1orf174Q8IYL3 243 aa13.34□□□□□ -0.27
SEMA4D-220ENST00000492386 GCSAMQ8N6F7 178 aa13.34□□□□□ -0.27
SEMA4D-220ENST00000492386 OR2T10Q8NGZ9 312 aa13.34□□□□□ -0.27
SEMA4D-220ENST00000492386 FAM216AQ8WUB2 273 aa13.34□□□□□ -0.27
SEMA4D-220ENST00000492386 TMEM170AQ8WVE7 144 aa13.34□□□□□ -0.27
SEMA4D-220ENST00000492386 TRAV17A0A0B4J275 112 aa13.34□□□□□ -0.27
SEMA4D-220ENST00000492386 F2RL2O00254 374 aa13.34□□□□□ -0.27
SEMA4D-220ENST00000492386 GALR2O43603 387 aaPredicted RBP13.34□□□□□ -0.27
SEMA4D-220ENST00000492386 SOX15O60248 233 aa13.34□□□□□ -0.27
SEMA4D-220ENST00000492386 GFRA3O60609 400 aa13.34□□□□□ -0.27
SEMA4D-220ENST00000492386 TYMSP04818 313 aa13.34□□□□□ -0.27
SEMA4D-220ENST00000492386 WT1P19544 449 aaPredicted RBP13.34□□□□□ -0.27
SEMA4D-220ENST00000492386 OPRK1P41145 380 aa13.34□□□□□ -0.27
SEMA4D-220ENST00000492386 TMPRSS3P57727 454 aa13.34□□□□□ -0.27
SEMA4D-220ENST00000492386 RPP30P78346 268 aaKnown RBP13.34□□□□□ -0.27
SEMA4D-220ENST00000492386 ACTL10Q5JWF8 245 aa13.34□□□□□ -0.27
SEMA4D-220ENST00000492386 MGST2Q99735 147 aa13.34□□□□□ -0.27
SEMA4D-220ENST00000492386 HEYLQ9NQ87 328 aaPredicted RBP13.34□□□□□ -0.27
SEMA4D-220ENST00000492386 SLC25A15Q9Y619 301 aa13.34□□□□□ -0.27
SEMA4D-220ENST00000492386 XKRY2A2RUG3 117 aa13.33□□□□□ -0.28
SEMA4D-220ENST00000492386 TMPRSS2O15393 492 aa13.33□□□□□ -0.28
SEMA4D-220ENST00000492386 CFHR2P36980 270 aa13.33□□□□□ -0.28
SEMA4D-220ENST00000492386 UTF1Q5T230 341 aa13.33□□□□□ -0.28
SEMA4D-220ENST00000492386 C1orf229Q6ZS94 237 aaPredicted RBP13.33□□□□□ -0.28
SEMA4D-220ENST00000492386 ZNRF1Q8ND25 227 aa13.33□□□□□ -0.28
SEMA4D-220ENST00000492386 RNASEH2CQ8TDP1 164 aaKnown RBP13.33□□□□□ -0.28
SEMA4D-220ENST00000492386 DERL1Q9BUN8 251 aa13.33□□□□□ -0.28
SEMA4D-220ENST00000492386 MS4A5Q9H3V2 200 aa13.33□□□□□ -0.28
SEMA4D-220ENST00000492386 PATZ1Q9HBE1 687 aaKnown RBP13.33□□□□□ -0.28
SEMA4D-220ENST00000492386 KCNIP2Q9NS61 270 aa13.33□□□□□ -0.28
SEMA4D-220ENST00000492386 PROCRQ9UNN8 238 aa13.33□□□□□ -0.28
SEMA4D-220ENST00000492386 A0A1W2PPV4 95 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms