RNA–Protein interactions for RNA: ENST00000488623.5

CTNS-206, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-206ENST00000488623 R3HDM4Q96D70 268 aa12.16□□□□□ -0.46
CTNS-206ENST00000488623 OR2A7Q96R45 310 aa12.16□□□□□ -0.46
CTNS-206ENST00000488623 CHIAQ9BZP6 476 aa12.16□□□□□ -0.46
CTNS-206ENST00000488623 ZNF436Q9C0F3 470 aaPredicted RBP12.16□□□□□ -0.46
CTNS-206ENST00000488623 MEGF9Q9H1U4 602 aa12.16□□□□□ -0.46
CTNS-206ENST00000488623 COMMD9Q9P000 198 aa12.16□□□□□ -0.46
CTNS-206ENST00000488623 TMED3Q9Y3Q3 217 aa12.16□□□□□ -0.46
CTNS-206ENST00000488623 CSPG4Q6UVK1 2322 aa12.15□□□□□ -0.46
CTNS-206ENST00000488623 C5orf51A6NDU8 294 aa12.15□□□□□ -0.46
CTNS-206ENST00000488623 FAM90A9PA6NNJ1 464 aa12.15□□□□□ -0.46
CTNS-206ENST00000488623 VENTXO95231 258 aa12.15□□□□□ -0.46
CTNS-206ENST00000488623 RAB13P51153 203 aa12.15□□□□□ -0.46
CTNS-206ENST00000488623 BPIFB3P59826 476 aa12.15□□□□□ -0.46
CTNS-206ENST00000488623 RPS16P62249 146 aaKnown RBP12.15□□□□□ -0.46
CTNS-206ENST00000488623 SRSF4Q08170 494 aaKnown RBP12.15□□□□□ -0.46
CTNS-206ENST00000488623 KRTAP21-3Q3LHN1 58 aa12.15□□□□□ -0.46
CTNS-206ENST00000488623 FBLN7Q53RD9 439 aa12.15□□□□□ -0.46
CTNS-206ENST00000488623 FAM120AOSQ5T036 256 aa12.15□□□□□ -0.46
CTNS-206ENST00000488623 Q6ZRM9 215 aa12.15□□□□□ -0.46
CTNS-206ENST00000488623 VKORC1L1Q8N0U8 176 aa12.15□□□□□ -0.46
CTNS-206ENST00000488623 OR4C13Q8NGP0 309 aa12.15□□□□□ -0.46
CTNS-206ENST00000488623 C2orf50Q96LR7 162 aa12.15□□□□□ -0.46
CTNS-206ENST00000488623 RANGRFQ9HD47 186 aaPredicted RBP12.15□□□□□ -0.46
CTNS-206ENST00000488623 NUP50Q9UKX7 468 aa12.15□□□□□ -0.46
CTNS-206ENST00000488623 PIGBOS1A0A0B4J2F0 54 aa12.14□□□□□ -0.47
CTNS-206ENST00000488623 SHOXO15266 292 aa12.14□□□□□ -0.47
CTNS-206ENST00000488623 ATG12O94817 140 aa12.14□□□□□ -0.47
CTNS-206ENST00000488623 LY6G6DO95868 133 aa12.14□□□□□ -0.47
CTNS-206ENST00000488623 HRASP01112 189 aa12.14□□□□□ -0.47
CTNS-206ENST00000488623 IGLV2-23P01705 113 aa12.14□□□□□ -0.47
CTNS-206ENST00000488623 NQO2P16083 231 aa12.14□□□□□ -0.47
CTNS-206ENST00000488623 CD24P25063 80 aa12.14□□□□□ -0.47
CTNS-206ENST00000488623 IL15RAQ13261 267 aa12.14□□□□□ -0.47
CTNS-206ENST00000488623 POU2AF1Q16633 256 aa12.14□□□□□ -0.47
CTNS-206ENST00000488623 SSX9Q7RTT3 188 aa12.14□□□□□ -0.47
CTNS-206ENST00000488623 AKAP14Q86UN6 197 aa12.14□□□□□ -0.47
CTNS-206ENST00000488623 BCL6BQ8N143 479 aaPredicted RBP12.14□□□□□ -0.47
CTNS-206ENST00000488623 OSR1Q8TAX0 266 aaPredicted RBP12.14□□□□□ -0.47
CTNS-206ENST00000488623 FYTTD1Q96QD9 318 aaKnown RBP12.14□□□□□ -0.47
CTNS-206ENST00000488623 MS4A7Q9GZW8 240 aaPredicted RBP12.14□□□□□ -0.47
CTNS-206ENST00000488623 YAE1D1Q9NRH1 226 aa12.14□□□□□ -0.47
CTNS-206ENST00000488623 MMP24Q9Y5R2 645 aa12.14□□□□□ -0.47
CTNS-206ENST00000488623 MARCH11A6NNE9 402 aa12.13□□□□□ -0.47
CTNS-206ENST00000488623 PFDN1O60925 122 aa12.13□□□□□ -0.47
CTNS-206ENST00000488623 IGKV1D-33P01593 117 aa12.13□□□□□ -0.47
CTNS-206ENST00000488623 IGKV1-33P01594 117 aa12.13□□□□□ -0.47
CTNS-206ENST00000488623 SNRNP70P08621 437 aaKnown RBP12.13□□□□□ -0.47
CTNS-206ENST00000488623 IL6RP08887 468 aaPredicted RBP12.13□□□□□ -0.47
CTNS-206ENST00000488623 OR9G9P0C7N8 305 aa12.13□□□□□ -0.47
CTNS-206ENST00000488623 AKR1C2P52895 323 aa12.13□□□□□ -0.47
CTNS-206ENST00000488623 EBI3Q14213 229 aa12.13□□□□□ -0.47
CTNS-206ENST00000488623 IAH1Q2TAA2 248 aaPredicted RBP12.13□□□□□ -0.47
CTNS-206ENST00000488623 H2BFWTQ7Z2G1 175 aa12.13□□□□□ -0.47
CTNS-206ENST00000488623 THNSL2Q86YJ6 484 aa12.13□□□□□ -0.47
CTNS-206ENST00000488623 FAM219AQ8IW50 185 aa12.13□□□□□ -0.47
CTNS-206ENST00000488623 ZBTB8BQ8NAP8 495 aaPredicted RBP12.13□□□□□ -0.47
CTNS-206ENST00000488623 DMBX1Q8NFW5 382 aa12.13□□□□□ -0.47
CTNS-206ENST00000488623 RNASE11Q8TAA1 199 aaKnown RBP12.13□□□□□ -0.47
CTNS-206ENST00000488623 RRNAD1Q96FB5 475 aaKnown RBP12.13□□□□□ -0.47
CTNS-206ENST00000488623 RHOVQ96L33 236 aa12.13□□□□□ -0.47
CTNS-206ENST00000488623 HARBI1Q96MB7 349 aa12.13□□□□□ -0.47
CTNS-206ENST00000488623 RNF5Q99942 180 aa12.13□□□□□ -0.47
CTNS-206ENST00000488623 FAM96BQ9Y3D0 163 aa12.13□□□□□ -0.47
CTNS-206ENST00000488623 NSD1Q96L73 2696 aaPredicted RBP12.12□□□□□ -0.47
CTNS-206ENST00000488623 TRAV3A0A0B4J244 114 aa12.12□□□□□ -0.47
CTNS-206ENST00000488623 A0A1B0GU03 582 aa12.12□□□□□ -0.47
CTNS-206ENST00000488623 PITX3O75364 302 aa12.12□□□□□ -0.47
CTNS-206ENST00000488623 MOSP00540 346 aa12.12□□□□□ -0.47
CTNS-206ENST00000488623 GIPP09681 153 aaPredicted RBP12.12□□□□□ -0.47
CTNS-206ENST00000488623 SLC25A6P12236 298 aa12.12□□□□□ -0.47
CTNS-206ENST00000488623 CNTFRP26992 372 aa12.12□□□□□ -0.47
CTNS-206ENST00000488623 BRS3P32247 399 aa12.12□□□□□ -0.47
CTNS-206ENST00000488623 LGALS7P47929 136 aa12.12□□□□□ -0.47
CTNS-206ENST00000488623 ERVK-16P61578 105 aa12.12□□□□□ -0.47
CTNS-206ENST00000488623 HNF4GQ14541 408 aa12.12□□□□□ -0.47
CTNS-206ENST00000488623 OR4A47Q6IF82 309 aa12.12□□□□□ -0.47
CTNS-206ENST00000488623 C9orf139Q6ZV77 190 aa12.12□□□□□ -0.47
CTNS-206ENST00000488623 IL17RELQ6ZVW7 336 aa12.12□□□□□ -0.47
CTNS-206ENST00000488623 PUSL1Q8N0Z8 303 aaKnown RBP12.12□□□□□ -0.47
CTNS-206ENST00000488623 PIFOQ8TCI5 191 aa12.12□□□□□ -0.47
CTNS-206ENST00000488623 EAF1Q96JC9 268 aaPredicted RBP12.12□□□□□ -0.47
CTNS-206ENST00000488623 PDCD10Q9BUL8 212 aa12.12□□□□□ -0.47
CTNS-206ENST00000488623 NMES1Q9C002 83 aa12.12□□□□□ -0.47
CTNS-206ENST00000488623 RANBP3Q9H6Z4 567 aaPredicted RBP12.12□□□□□ -0.47
CTNS-206ENST00000488623 TMEM140Q9NV12 185 aa12.12□□□□□ -0.47
CTNS-206ENST00000488623 GSKIPQ9P0R6 139 aa12.12□□□□□ -0.47
CTNS-206ENST00000488623 TLN2Q9Y4G6 2542 aa12.11□□□□□ -0.47
CTNS-206ENST00000488623 SMLR1H3BR10 107 aa12.11□□□□□ -0.47
CTNS-206ENST00000488623 CRYGBP07316 175 aa12.11□□□□□ -0.47
CTNS-206ENST00000488623 DYNLT3P51808 116 aa12.11□□□□□ -0.47
CTNS-206ENST00000488623 F2RL1P55085 397 aa12.11□□□□□ -0.47
CTNS-206ENST00000488623 RAP2BP61225 183 aa12.11□□□□□ -0.47
CTNS-206ENST00000488623 SMCO1Q147U7 214 aa12.11□□□□□ -0.47
CTNS-206ENST00000488623 PSG5Q15238 335 aa12.11□□□□□ -0.47
CTNS-206ENST00000488623 DEFB112Q30KQ8 113 aa12.11□□□□□ -0.47
CTNS-206ENST00000488623 Q5BKY6 102 aa12.11□□□□□ -0.47
CTNS-206ENST00000488623 Q8N6K4 173 aa12.11□□□□□ -0.47
CTNS-206ENST00000488623 OR4D5Q8NGN0 318 aa12.11□□□□□ -0.47
CTNS-206ENST00000488623 OR2T10Q8NGZ9 312 aa12.11□□□□□ -0.47
CTNS-206ENST00000488623 AIFM2Q9BRQ8 373 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms