RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 H0Y8G0 127 aa10.69□□□□□ -0.7
VPS52-218ENST00000482399 SPINT2O43291 252 aa10.69□□□□□ -0.7
VPS52-218ENST00000482399 OR10J1P30954 320 aa10.69□□□□□ -0.7
VPS52-218ENST00000482399 ADMP35318 185 aa10.69□□□□□ -0.7
VPS52-218ENST00000482399 TSPAN7P41732 249 aa10.69□□□□□ -0.7
VPS52-218ENST00000482399 NUTF2P61970 127 aaKnown RBP10.69□□□□□ -0.7
VPS52-218ENST00000482399 GNB1P62873 340 aa10.69□□□□□ -0.7
VPS52-218ENST00000482399 OR8I2Q8N0Y5 310 aa10.69□□□□□ -0.7
VPS52-218ENST00000482399 OR1L6Q8NGR2 347 aa10.69□□□□□ -0.7
VPS52-218ENST00000482399 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.68□□□□□ -0.7
VPS52-218ENST00000482399 DKK1O94907 266 aa10.68□□□□□ -0.7
VPS52-218ENST00000482399 OR10J4P0C629 311 aa10.68□□□□□ -0.7
VPS52-218ENST00000482399 DAZAP2Q15038 168 aaPredicted RBP10.68□□□□□ -0.7
VPS52-218ENST00000482399 TDRG1Q3Y452 100 aa10.68□□□□□ -0.7
VPS52-218ENST00000482399 TMEM164Q5U3C3 297 aa10.68□□□□□ -0.7
VPS52-218ENST00000482399 TMEM251Q8N6I4 163 aa10.68□□□□□ -0.7
VPS52-218ENST00000482399 FAM173AQ9BQD7 235 aa10.68□□□□□ -0.7
VPS52-218ENST00000482399 INTS1Q8N201 2190 aaKnown RBP10.68□□□□□ -0.7
VPS52-218ENST00000482399 ABLIM2Q6H8Q1 611 aa10.68□□□□□ -0.7
VPS52-218ENST00000482399 RNF138Q8WVD3 245 aa10.68□□□□□ -0.7
VPS52-218ENST00000482399 SFRP2Q96HF1 295 aa10.68□□□□□ -0.7
VPS52-218ENST00000482399 MRPL37Q9BZE1 423 aaKnown RBP10.68□□□□□ -0.7
VPS52-218ENST00000482399 IGHV3OR15-7A0A075B7D8 119 aa10.68□□□□□ -0.7
VPS52-218ENST00000482399 LOC102723996A0A087X1L8 192 aa10.68□□□□□ -0.7
VPS52-218ENST00000482399 SERF1AO75920 110 aa10.68□□□□□ -0.7
VPS52-218ENST00000482399 LINC01551Q86U37 167 aa10.68□□□□□ -0.7
VPS52-218ENST00000482399 DOLPP1Q86YN1 238 aa10.68□□□□□ -0.7
VPS52-218ENST00000482399 OR5AU1Q8NGC0 362 aa10.68□□□□□ -0.7
VPS52-218ENST00000482399 FAM122AQ96E09 287 aa10.68□□□□□ -0.7
VPS52-218ENST00000482399 HSD17B10Q99714 261 aaKnown RBP10.68□□□□□ -0.7
VPS52-218ENST00000482399 C2orf88Q9BSF0 95 aa10.68□□□□□ -0.7
VPS52-218ENST00000482399 TTTY12Q9BZ98 90 aa10.68□□□□□ -0.7
VPS52-218ENST00000482399 GOLT1BQ9Y3E0 138 aa10.68□□□□□ -0.7
VPS52-218ENST00000482399 PXMP4Q9Y6I8 212 aa10.68□□□□□ -0.7
VPS52-218ENST00000482399 MOB1BQ7L9L4 216 aa10.67□□□□□ -0.7
VPS52-218ENST00000482399 FAM216AQ8WUB2 273 aa10.67□□□□□ -0.7
VPS52-218ENST00000482399 MRPL18Q9H0U6 180 aaKnown RBP10.67□□□□□ -0.7
VPS52-218ENST00000482399 LAMTOR5O43504 91 aa10.67□□□□□ -0.7
VPS52-218ENST00000482399 TCF21O43680 179 aa10.67□□□□□ -0.7
VPS52-218ENST00000482399 RPL31P62899 125 aaKnown RBP10.67□□□□□ -0.7
VPS52-218ENST00000482399 RAB31Q13636 194 aa10.67□□□□□ -0.7
VPS52-218ENST00000482399 ZNF645Q8N7E2 425 aa10.67□□□□□ -0.7
VPS52-218ENST00000482399 SPSB4Q96A44 273 aa10.67□□□□□ -0.7
VPS52-218ENST00000482399 LY6G6EA0A0G2JKS1 128 aa10.66□□□□□ -0.7
VPS52-218ENST00000482399 ZNF253O75346 499 aa10.66□□□□□ -0.7
VPS52-218ENST00000482399 IGHV3-48P01763 117 aa10.66□□□□□ -0.7
VPS52-218ENST00000482399 IGHEP01854 428 aa10.66□□□□□ -0.7
VPS52-218ENST00000482399 GATA2P23769 480 aaPredicted RBP10.66□□□□□ -0.7
VPS52-218ENST00000482399 ATP6V1FQ16864 119 aa10.66□□□□□ -0.7
VPS52-218ENST00000482399 DMRTA1Q5VZB9 504 aa10.66□□□□□ -0.7
VPS52-218ENST00000482399 TIPARPQ7Z3E1 657 aaKnown RBP10.66□□□□□ -0.7
VPS52-218ENST00000482399 TDHQ8IZJ6 230 aa10.66□□□□□ -0.7
VPS52-218ENST00000482399 OCC1Q8TAD7 63 aa10.66□□□□□ -0.7
VPS52-218ENST00000482399 ZNF586Q9NXT0 402 aa10.66□□□□□ -0.7
VPS52-218ENST00000482399 U3KQA8 63 aa10.66□□□□□ -0.7
VPS52-218ENST00000482399 COL6A3P12111 3177 aa10.66□□□□□ -0.7
VPS52-218ENST00000482399 NEURL1O76050 574 aa10.66□□□□□ -0.7
VPS52-218ENST00000482399 RPLP1P05386 114 aaKnown RBP10.66□□□□□ -0.7
VPS52-218ENST00000482399 NPPCP23582 126 aa10.66□□□□□ -0.7
VPS52-218ENST00000482399 GNG10P50151 68 aa10.66□□□□□ -0.7
VPS52-218ENST00000482399 MEOX1P50221 254 aa10.66□□□□□ -0.7
VPS52-218ENST00000482399 TNFSF10P50591 281 aa10.66□□□□□ -0.7
VPS52-218ENST00000482399 PSG5Q15238 335 aa10.66□□□□□ -0.7
VPS52-218ENST00000482399 RPL39P5Q59GN2 51 aa10.66□□□□□ -0.7
VPS52-218ENST00000482399 ATP1A1-AS1Q5TC04 95 aa10.66□□□□□ -0.7
VPS52-218ENST00000482399 TGIF2LYQ8IUE0 185 aa10.66□□□□□ -0.7
VPS52-218ENST00000482399 SAXO1Q8IYX7 474 aa10.66□□□□□ -0.7
VPS52-218ENST00000482399 GBGT1Q8N5D6 347 aa10.66□□□□□ -0.7
VPS52-218ENST00000482399 TMEM105Q8N8V8 129 aa10.66□□□□□ -0.7
VPS52-218ENST00000482399 SGK494Q96LW2 274 aa10.66□□□□□ -0.7
VPS52-218ENST00000482399 WNT10AQ9GZT5 417 aa10.66□□□□□ -0.7
VPS52-218ENST00000482399 POLR3KQ9Y2Y1 108 aaPredicted RBP10.66□□□□□ -0.7
VPS52-218ENST00000482399 ACACAQ13085 2346 aa10.66□□□□□ -0.7
VPS52-218ENST00000482399 AKAP6Q13023 2319 aa10.66□□□□□ -0.7
VPS52-218ENST00000482399 RBFOX2O43251 390 aaKnown RBP eCLIP10.66□□□□□ -0.7
VPS52-218ENST00000482399 IRF2P14316 349 aa10.66□□□□□ -0.7
VPS52-218ENST00000482399 CD82P27701 267 aa10.66□□□□□ -0.7
VPS52-218ENST00000482399 SRP14P37108 136 aaKnown RBP10.66□□□□□ -0.7
VPS52-218ENST00000482399 TMEM183BQ1AE95 376 aa10.66□□□□□ -0.7
VPS52-218ENST00000482399 FAM19A2Q8N3H0 131 aa10.66□□□□□ -0.7
VPS52-218ENST00000482399 OR2Z1Q8NG97 314 aa10.66□□□□□ -0.7
VPS52-218ENST00000482399 S1PR3Q99500 378 aa10.66□□□□□ -0.7
VPS52-218ENST00000482399 CLCF1Q9UBD9 225 aa10.66□□□□□ -0.7
VPS52-218ENST00000482399 METRNQ9UJH8 293 aa10.66□□□□□ -0.7
VPS52-218ENST00000482399 RRHO14718 337 aa10.65□□□□□ -0.7
VPS52-218ENST00000482399 SUMO1P63165 101 aaKnown RBP10.65□□□□□ -0.7
VPS52-218ENST00000482399 TMEM14EPQ6UXP3 125 aa10.65□□□□□ -0.7
VPS52-218ENST00000482399 ERASQ7Z444 233 aa10.65□□□□□ -0.7
VPS52-218ENST00000482399 OR13A1Q8NGR1 328 aa10.65□□□□□ -0.7
VPS52-218ENST00000482399 TRIB1Q96RU8 372 aa10.65□□□□□ -0.7
VPS52-218ENST00000482399 SPTAN1Q13813 2472 aaKnown RBP10.65□□□□□ -0.7
VPS52-218ENST00000482399 PDE6DO43924 150 aa10.65□□□□□ -0.7
VPS52-218ENST00000482399 RPL19P84098 196 aaKnown RBP10.65□□□□□ -0.7
VPS52-218ENST00000482399 SPATA31B1PQ5VZV4 182 aa10.65□□□□□ -0.7
VPS52-218ENST00000482399 TAAR6Q96RI8 345 aa10.65□□□□□ -0.7
VPS52-218ENST00000482399 STRADBQ9C0K7 418 aa10.65□□□□□ -0.7
VPS52-218ENST00000482399 LINC00473A8K010 186 aa10.64□□□□□ -0.71
VPS52-218ENST00000482399 CDKN1AP38936 164 aa10.64□□□□□ -0.71
VPS52-218ENST00000482399 CAMPP49913 170 aa10.64□□□□□ -0.71
VPS52-218ENST00000482399 RPP30P78346 268 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms