RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 EIF3GO75821 320 aaKnown RBP eCLIP10.7□□□□□ -0.7
SEC13-216ENST00000479868 DAOP14920 347 aa10.7□□□□□ -0.7
SEC13-216ENST00000479868 NQO2P16083 231 aa10.7□□□□□ -0.7
SEC13-216ENST00000479868 NDUFB7P17568 137 aa10.7□□□□□ -0.7
SEC13-216ENST00000479868 FGF8P55075 233 aaPredicted RBP10.7□□□□□ -0.7
SEC13-216ENST00000479868 RAB2AP61019 212 aa10.7□□□□□ -0.7
SEC13-216ENST00000479868 DMRTC2Q8IXT2 367 aaPredicted RBP10.7□□□□□ -0.7
SEC13-216ENST00000479868 LYG1Q8N1E2 194 aa10.7□□□□□ -0.7
SEC13-216ENST00000479868 CORO2AQ92828 525 aa10.7□□□□□ -0.7
SEC13-216ENST00000479868 VKORC1Q9BQB6 163 aa10.7□□□□□ -0.7
SEC13-216ENST00000479868 TMEM147Q9BVK8 224 aa10.7□□□□□ -0.7
SEC13-216ENST00000479868 LINC00574Q9H8X3 128 aa10.7□□□□□ -0.7
SEC13-216ENST00000479868 SMCO4Q9NRQ5 59 aa10.7□□□□□ -0.7
SEC13-216ENST00000479868 RAXQ9Y2V3 346 aa10.7□□□□□ -0.7
SEC13-216ENST00000479868 ARFGEF3Q5TH69 2177 aa10.7□□□□□ -0.7
SEC13-216ENST00000479868 TRGV8A0A0C4DH27 118 aa10.7□□□□□ -0.7
SEC13-216ENST00000479868 FAM90A9PA6NNJ1 464 aa10.7□□□□□ -0.7
SEC13-216ENST00000479868 C15orf62A8K5M9 175 aa10.7□□□□□ -0.7
SEC13-216ENST00000479868 COLCA2A8K830 154 aa10.7□□□□□ -0.7
SEC13-216ENST00000479868 GFRA3O60609 400 aa10.7□□□□□ -0.7
SEC13-216ENST00000479868 IGKV1D-33P01593 117 aa10.7□□□□□ -0.7
SEC13-216ENST00000479868 IGKV1-33P01594 117 aa10.7□□□□□ -0.7
SEC13-216ENST00000479868 CEBPGP53567 150 aa10.7□□□□□ -0.7
SEC13-216ENST00000479868 RELBQ01201 579 aa10.7□□□□□ -0.7
SEC13-216ENST00000479868 ATP6V1FQ16864 119 aa10.7□□□□□ -0.7
SEC13-216ENST00000479868 TMEM41BQ5BJD5 291 aa10.7□□□□□ -0.7
SEC13-216ENST00000479868 ZNF787Q6DD87 383 aa10.7□□□□□ -0.7
SEC13-216ENST00000479868 CFAP161Q6P656 301 aa10.7□□□□□ -0.7
SEC13-216ENST00000479868 OR4A16Q8NH70 328 aa10.7□□□□□ -0.7
SEC13-216ENST00000479868 PINX1Q96BK5 328 aaKnown RBP10.7□□□□□ -0.7
SEC13-216ENST00000479868 TMEM140Q9NV12 185 aa10.7□□□□□ -0.7
SEC13-216ENST00000479868 ZNRD1Q9P1U0 126 aa10.7□□□□□ -0.7
SEC13-216ENST00000479868 GNG13Q9P2W3 67 aa10.7□□□□□ -0.7
SEC13-216ENST00000479868 KIR2DS2P43631 304 aa10.69□□□□□ -0.7
SEC13-216ENST00000479868 ERVK-16P61578 105 aa10.69□□□□□ -0.7
SEC13-216ENST00000479868 MRPS11P82912 194 aaKnown RBP10.69□□□□□ -0.7
SEC13-216ENST00000479868 TFF3Q07654 80 aa10.69□□□□□ -0.7
SEC13-216ENST00000479868 ACSM6Q6P461 480 aa10.69□□□□□ -0.7
SEC13-216ENST00000479868 SSX8Q7RTT4 187 aa10.69□□□□□ -0.7
SEC13-216ENST00000479868 RPP25LQ8N5L8 163 aaKnown RBP10.69□□□□□ -0.7
SEC13-216ENST00000479868 CYB561D1Q8N8Q1 229 aa10.69□□□□□ -0.7
SEC13-216ENST00000479868 ZNF383Q8NA42 475 aa10.69□□□□□ -0.7
SEC13-216ENST00000479868 KDF1Q8NAX2 398 aaPredicted RBP10.69□□□□□ -0.7
SEC13-216ENST00000479868 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.69□□□□□ -0.7
SEC13-216ENST00000479868 OR4S2Q8NH73 311 aa10.69□□□□□ -0.7
SEC13-216ENST00000479868 MBD3L1Q8WWY6 194 aa10.69□□□□□ -0.7
SEC13-216ENST00000479868 CCL17Q92583 94 aa10.69□□□□□ -0.7
SEC13-216ENST00000479868 SLC25A10Q9UBX3 287 aaPredicted RBP10.69□□□□□ -0.7
SEC13-216ENST00000479868 PUS1Q9Y606 427 aaKnown RBP eCLIP10.69□□□□□ -0.7
SEC13-216ENST00000479868 ATRXP46100 2492 aa10.69□□□□□ -0.7
SEC13-216ENST00000479868 TRAV38-1A0A0B4J264 116 aa10.69□□□□□ -0.7
SEC13-216ENST00000479868 NKX6-3A6NJ46 265 aa10.69□□□□□ -0.7
SEC13-216ENST00000479868 E7EQL1 145 aa10.69□□□□□ -0.7
SEC13-216ENST00000479868 TMEM178BH3BS89 294 aa10.69□□□□□ -0.7
SEC13-216ENST00000479868 HSPB1P04792 205 aaKnown RBP10.69□□□□□ -0.7
SEC13-216ENST00000479868 FGF7P21781 194 aa10.69□□□□□ -0.7
SEC13-216ENST00000479868 CENPVQ7Z7K6 275 aaPredicted RBP10.69□□□□□ -0.7
SEC13-216ENST00000479868 RNASE6Q93091 150 aaKnown RBP10.69□□□□□ -0.7
SEC13-216ENST00000479868 RPUSD1Q9UJJ7 312 aaKnown RBP10.69□□□□□ -0.7
SEC13-216ENST00000479868 TIMM9Q9Y5J7 89 aa10.69□□□□□ -0.7
SEC13-216ENST00000479868 NBASA2RRP1 2371 aa10.68□□□□□ -0.7
SEC13-216ENST00000479868 LOC102723971A0A1B0GUV8 181 aa10.68□□□□□ -0.7
SEC13-216ENST00000479868 hADV38S2A0JD32 116 aa10.68□□□□□ -0.7
SEC13-216ENST00000479868 ZFP92A6NM28 416 aa10.68□□□□□ -0.7
SEC13-216ENST00000479868 SPCS3P61009 180 aa10.68□□□□□ -0.7
SEC13-216ENST00000479868 GNB2P62879 340 aa10.68□□□□□ -0.7
SEC13-216ENST00000479868 VWC2Q2TAL6 325 aa10.68□□□□□ -0.7
SEC13-216ENST00000479868 NCMAPQ5T1S8 102 aa10.68□□□□□ -0.7
SEC13-216ENST00000479868 FAM122CQ6P4D5 195 aa10.68□□□□□ -0.7
SEC13-216ENST00000479868 EGLN1Q9GZT9 426 aa10.68□□□□□ -0.7
SEC13-216ENST00000479868 LINC00312Q9Y6C7 94 aa10.68□□□□□ -0.7
SEC13-216ENST00000479868 PPIAL4EA0A075B759 164 aa10.68□□□□□ -0.7
SEC13-216ENST00000479868 PPIAL4DF5H284 164 aa10.68□□□□□ -0.7
SEC13-216ENST00000479868 ARG1P05089 322 aa10.68□□□□□ -0.7
SEC13-216ENST00000479868 PPIAL4FP0DN26 164 aa10.68□□□□□ -0.7
SEC13-216ENST00000479868 THBS3P49746 956 aa10.68□□□□□ -0.7
SEC13-216ENST00000479868 KHDC3LQ587J8 217 aa10.68□□□□□ -0.7
SEC13-216ENST00000479868 SLC25A48Q6ZT89 311 aaKnown RBP10.68□□□□□ -0.7
SEC13-216ENST00000479868 ZCCHC14Q8WYQ9 949 aaKnown RBP10.68□□□□□ -0.7
SEC13-216ENST00000479868 ISOC2Q96AB3 205 aa10.68□□□□□ -0.7
SEC13-216ENST00000479868 RHOVQ96L33 236 aa10.68□□□□□ -0.7
SEC13-216ENST00000479868 NPCDR1Q9BY65 106 aa10.68□□□□□ -0.7
SEC13-216ENST00000479868 NGBQ9NPG2 151 aa10.68□□□□□ -0.7
SEC13-216ENST00000479868 TMEM106BQ9NUM4 274 aa10.68□□□□□ -0.7
SEC13-216ENST00000479868 PPIAL4AQ9Y536 164 aa10.68□□□□□ -0.7
SEC13-216ENST00000479868 MAP1LC3B2A6NCE7 125 aa10.67□□□□□ -0.7
SEC13-216ENST00000479868 CRYBA1P05813 215 aa10.67□□□□□ -0.7
SEC13-216ENST00000479868 MDKP21741 143 aaPredicted RBP10.67□□□□□ -0.7
SEC13-216ENST00000479868 VDAC2P45880 294 aaPredicted RBP10.67□□□□□ -0.7
SEC13-216ENST00000479868 RPL31P62899 125 aaKnown RBP10.67□□□□□ -0.7
SEC13-216ENST00000479868 RHEBQ15382 184 aa10.67□□□□□ -0.7
SEC13-216ENST00000479868 LYPD2Q6UXB3 125 aa10.67□□□□□ -0.7
SEC13-216ENST00000479868 C1orf87Q8N0U7 546 aa10.67□□□□□ -0.7
SEC13-216ENST00000479868 OR52E5Q8NH55 327 aa10.67□□□□□ -0.7
SEC13-216ENST00000479868 MAP1LC3BQ9GZQ8 125 aa10.67□□□□□ -0.7
SEC13-216ENST00000479868 MLXQ9UH92 298 aa10.67□□□□□ -0.7
SEC13-216ENST00000479868 H3BQ15 152 aa10.67□□□□□ -0.7
SEC13-216ENST00000479868 RRHO14718 337 aa10.67□□□□□ -0.7
SEC13-216ENST00000479868 BCL2P10415 239 aa10.67□□□□□ -0.7
SEC13-216ENST00000479868 CCL3L1P16619 93 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms