RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 TCTEX1D2Q8WW35 142 aa6.42□□□□□ -1.38
ERCC8-205ENST00000477893 YIPF6Q96EC8 236 aa6.42□□□□□ -1.38
ERCC8-205ENST00000477893 RNF5Q99942 180 aa6.42□□□□□ -1.38
ERCC8-205ENST00000477893 TOLLIPQ9H0E2 274 aa6.42□□□□□ -1.38
ERCC8-205ENST00000477893 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.42□□□□□ -1.38
ERCC8-205ENST00000477893 COA4Q9NYJ1 87 aa6.42□□□□□ -1.38
ERCC8-205ENST00000477893 ANXA10Q9UJ72 324 aa6.42□□□□□ -1.38
ERCC8-205ENST00000477893 OR2W1Q9Y3N9 320 aa6.42□□□□□ -1.38
ERCC8-205ENST00000477893 C13orf42A0A1B0GVH6 325 aa6.41□□□□□ -1.38
ERCC8-205ENST00000477893 ANKRD34BA5PLL1 514 aa6.41□□□□□ -1.38
ERCC8-205ENST00000477893 KRTAP9-7A8MTY7 169 aa6.41□□□□□ -1.38
ERCC8-205ENST00000477893 LINC01619G3V211 115 aa6.41□□□□□ -1.38
ERCC8-205ENST00000477893 DIRAS3O95661 229 aa6.41□□□□□ -1.38
ERCC8-205ENST00000477893 PRH1P02810 166 aa6.41□□□□□ -1.38
ERCC8-205ENST00000477893 LGALS1P09382 135 aaKnown RBP6.41□□□□□ -1.38
ERCC8-205ENST00000477893 CTXN2P0C2S0 81 aa6.41□□□□□ -1.38
ERCC8-205ENST00000477893 SAA1P0DJI8 122 aaPredicted RBP6.41□□□□□ -1.38
ERCC8-205ENST00000477893 RRASP10301 218 aa6.41□□□□□ -1.38
ERCC8-205ENST00000477893 AADACP22760 399 aa6.41□□□□□ -1.38
ERCC8-205ENST00000477893 FCGR2CP31995 323 aa6.41□□□□□ -1.38
ERCC8-205ENST00000477893 LGALS7P47929 136 aa6.41□□□□□ -1.38
ERCC8-205ENST00000477893 CRIP2P52943 208 aaPredicted RBP6.41□□□□□ -1.38
ERCC8-205ENST00000477893 VBP1P61758 197 aa6.41□□□□□ -1.38
ERCC8-205ENST00000477893 NCS1P62166 190 aa6.41□□□□□ -1.38
ERCC8-205ENST00000477893 RPL30P62888 115 aaKnown RBP6.41□□□□□ -1.38
ERCC8-205ENST00000477893 SRSF7Q16629 238 aaKnown RBP eCLIP6.41□□□□□ -1.38
ERCC8-205ENST00000477893 TMEM177Q53S58 311 aa6.41□□□□□ -1.38
ERCC8-205ENST00000477893 UBE2NLQ5JXB2 153 aa6.41□□□□□ -1.38
ERCC8-205ENST00000477893 C9orf66Q5T8R8 295 aa6.41□□□□□ -1.38
ERCC8-205ENST00000477893 SSX9Q7RTT3 188 aa6.41□□□□□ -1.38
ERCC8-205ENST00000477893 TMEM17Q86X19 198 aa6.41□□□□□ -1.38
ERCC8-205ENST00000477893 TCTEX1D1Q8N7M0 179 aa6.41□□□□□ -1.38
ERCC8-205ENST00000477893 POC5Q8NA72 575 aa6.41□□□□□ -1.38
ERCC8-205ENST00000477893 DDB2Q92466 427 aa6.41□□□□□ -1.38
ERCC8-205ENST00000477893 DCUN1D4Q92564 292 aa6.41□□□□□ -1.38
ERCC8-205ENST00000477893 ADTRPQ96IZ2 230 aa6.41□□□□□ -1.38
ERCC8-205ENST00000477893 DCSTAMPQ9H295 470 aa6.41□□□□□ -1.38
ERCC8-205ENST00000477893 AUNIPQ9H7T9 357 aa6.41□□□□□ -1.38
ERCC8-205ENST00000477893 IFT46Q9NQC8 304 aa6.41□□□□□ -1.38
ERCC8-205ENST00000477893 DIABLOQ9NR28 239 aa6.41□□□□□ -1.38
ERCC8-205ENST00000477893 MRPS7Q9Y2R9 242 aaKnown RBP6.41□□□□□ -1.38
ERCC8-205ENST00000477893 RBMX2Q9Y388 322 aaKnown RBP6.41□□□□□ -1.38
ERCC8-205ENST00000477893 NUBP2Q9Y5Y2 271 aa6.41□□□□□ -1.38
ERCC8-205ENST00000477893 MSGN1A6NI15 193 aa6.4□□□□□ -1.38
ERCC8-205ENST00000477893 OVOL1O14753 267 aa6.4□□□□□ -1.38
ERCC8-205ENST00000477893 ACTL6BO94805 426 aa6.4□□□□□ -1.38
ERCC8-205ENST00000477893 IGLV2-14P01704 120 aa6.4□□□□□ -1.38
ERCC8-205ENST00000477893 HLA-DQB1P01920 261 aa6.4□□□□□ -1.38
ERCC8-205ENST00000477893 CRYGBP07316 175 aa6.4□□□□□ -1.38
ERCC8-205ENST00000477893 UBE2KP61086 200 aa6.4□□□□□ -1.38
ERCC8-205ENST00000477893 CD69Q07108 199 aa6.4□□□□□ -1.38
ERCC8-205ENST00000477893 PRSS8Q16651 343 aa6.4□□□□□ -1.38
ERCC8-205ENST00000477893 AKIRIN2Q53H80 203 aa6.4□□□□□ -1.38
ERCC8-205ENST00000477893 RNASE12Q5GAN4 147 aaKnown RBP6.4□□□□□ -1.38
ERCC8-205ENST00000477893 TMEM69Q5SWH9 247 aa6.4□□□□□ -1.38
ERCC8-205ENST00000477893 PYHIN1Q6K0P9 492 aa6.4□□□□□ -1.38
ERCC8-205ENST00000477893 C11orf87Q6NUJ2 197 aa6.4□□□□□ -1.38
ERCC8-205ENST00000477893 C19orf35Q6ZS72 473 aa6.4□□□□□ -1.38
ERCC8-205ENST00000477893 HOGA1Q86XE5 327 aa6.4□□□□□ -1.38
ERCC8-205ENST00000477893 OR13F1Q8NGS4 319 aa6.4□□□□□ -1.38
ERCC8-205ENST00000477893 SNAPC3Q92966 411 aa6.4□□□□□ -1.38
ERCC8-205ENST00000477893 DLX4Q92988 240 aaPredicted RBP6.4□□□□□ -1.38
ERCC8-205ENST00000477893 RSRP1Q9BUV0 290 aa6.4□□□□□ -1.38
ERCC8-205ENST00000477893 FUNDC2Q9BWH2 189 aa6.4□□□□□ -1.38
ERCC8-205ENST00000477893 ZNF430Q9H8G1 570 aaPredicted RBP6.4□□□□□ -1.38
ERCC8-205ENST00000477893 CCL28Q9NRJ3 127 aa6.4□□□□□ -1.38
ERCC8-205ENST00000477893 COMMD3Q9UBI1 195 aa6.4□□□□□ -1.38
ERCC8-205ENST00000477893 PRELID3BQ9Y3B1 194 aa6.4□□□□□ -1.38
ERCC8-205ENST00000477893 DNAH9Q9NYC9 4486 aa6.39□□□□□ -1.39
ERCC8-205ENST00000477893 SULT1C2O00338 296 aa6.39□□□□□ -1.39
ERCC8-205ENST00000477893 PPYP01298 95 aa6.39□□□□□ -1.39
ERCC8-205ENST00000477893 PMP2P02689 132 aa6.39□□□□□ -1.39
ERCC8-205ENST00000477893 EIF4EP06730 217 aaKnown RBP6.39□□□□□ -1.39
ERCC8-205ENST00000477893 RPA2P15927 270 aa6.39□□□□□ -1.39
ERCC8-205ENST00000477893 SCAND1P57086 179 aa6.39□□□□□ -1.39
ERCC8-205ENST00000477893 TAS2R20P59543 309 aa6.39□□□□□ -1.39
ERCC8-205ENST00000477893 HERV-K104P61576 105 aa6.39□□□□□ -1.39
ERCC8-205ENST00000477893 RUNX1Q01196 453 aa6.39□□□□□ -1.39
ERCC8-205ENST00000477893 MRGPRG-AS1Q2M3A8 158 aa6.39□□□□□ -1.39
ERCC8-205ENST00000477893 OR51H1Q8NH63 302 aa6.39□□□□□ -1.39
ERCC8-205ENST00000477893 OR4S2Q8NH73 311 aa6.39□□□□□ -1.39
ERCC8-205ENST00000477893 OSR1Q8TAX0 266 aaPredicted RBP6.39□□□□□ -1.39
ERCC8-205ENST00000477893 SRSF12Q8WXF0 261 aaKnown RBP6.39□□□□□ -1.39
ERCC8-205ENST00000477893 S100A16Q96FQ6 103 aaKnown RBP6.39□□□□□ -1.39
ERCC8-205ENST00000477893 FYTTD1Q96QD9 318 aaKnown RBP6.39□□□□□ -1.39
ERCC8-205ENST00000477893 TINAGL1Q9GZM7 467 aaPredicted RBP6.39□□□□□ -1.39
ERCC8-205ENST00000477893 SLC5A7Q9GZV3 580 aa6.39□□□□□ -1.39
ERCC8-205ENST00000477893 SLA2Q9H6Q3 261 aa6.39□□□□□ -1.39
ERCC8-205ENST00000477893 EHFQ9NZC4 300 aa6.39□□□□□ -1.39
ERCC8-205ENST00000477893 SCOCQ9UIL1 159 aa6.39□□□□□ -1.39
ERCC8-205ENST00000477893 A0A0A6YYH2 397 aa6.38□□□□□ -1.39
ERCC8-205ENST00000477893 HMX3A6NHT5 357 aa6.38□□□□□ -1.39
ERCC8-205ENST00000477893 A6NJ64 397 aa6.38□□□□□ -1.39
ERCC8-205ENST00000477893 XRCC3O43542 346 aa6.38□□□□□ -1.39
ERCC8-205ENST00000477893 RAMP3O60896 148 aa6.38□□□□□ -1.39
ERCC8-205ENST00000477893 RBMXL2O75526 392 aaKnown RBP6.38□□□□□ -1.39
ERCC8-205ENST00000477893 SLC22A5O76082 557 aa6.38□□□□□ -1.39
ERCC8-205ENST00000477893 GHRHP01286 108 aa6.38□□□□□ -1.39
ERCC8-205ENST00000477893 HSPB1P04792 205 aaKnown RBP6.38□□□□□ -1.39
ERCC8-205ENST00000477893 SMIM18P0DKX4 95 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms