RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, human

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRCH3-215	ENST00000476664	SLC6A1	P30531	599 aa		4.92	□□□□□ -1.62
LRCH3-215	ENST00000476664	HMGA2	P52926	109 aa		4.92	□□□□□ -1.62
LRCH3-215	ENST00000476664	SKP2	Q13309	424 aa		4.92	□□□□□ -1.62
LRCH3-215	ENST00000476664	RSU1	Q15404	277 aa		4.92	□□□□□ -1.62
LRCH3-215	ENST00000476664	YIF1B	Q5BJH7	314 aa		4.92	□□□□□ -1.62
LRCH3-215	ENST00000476664	OR10K2	Q6IF99	312 aa		4.92	□□□□□ -1.62
LRCH3-215	ENST00000476664	C22orf39	Q6P5X5	142 aa		4.92	□□□□□ -1.62
LRCH3-215	ENST00000476664	LYPD2	Q6UXB3	125 aa		4.92	□□□□□ -1.62
LRCH3-215	ENST00000476664	SCGB1D4	Q6XE38	83 aa		4.92	□□□□□ -1.62
LRCH3-215	ENST00000476664	SLC36A1	Q7Z2H8	476 aa		4.92	□□□□□ -1.62
LRCH3-215	ENST00000476664	GALNT10	Q86SR1	603 aa		4.92	□□□□□ -1.62
LRCH3-215	ENST00000476664	MYPOP	Q86VE0	399 aa	Predicted RBP	4.92	□□□□□ -1.62
LRCH3-215	ENST00000476664	C11orf53	Q8IXP5	236 aa		4.92	□□□□□ -1.62
LRCH3-215	ENST00000476664	DRAM1	Q8N682	238 aa		4.92	□□□□□ -1.62
LRCH3-215	ENST00000476664	PARP11	Q9NR21	331 aa		4.92	□□□□□ -1.62
LRCH3-215	ENST00000476664	OR51B4	Q9Y5P0	310 aa		4.92	□□□□□ -1.62
LRCH3-215	ENST00000476664	SACS	Q9NZJ4	4579 aa		4.91	□□□□□ -1.62
LRCH3-215	ENST00000476664	TENM2	Q9NT68	2774 aa		4.91	□□□□□ -1.62
LRCH3-215	ENST00000476664	PLAC8L1	A1L4L8	177 aa		4.91	□□□□□ -1.62
LRCH3-215	ENST00000476664	C8orf87	E5RJ46	101 aa		4.91	□□□□□ -1.62
LRCH3-215	ENST00000476664	NOS1AP	O75052	506 aa	Predicted RBP	4.91	□□□□□ -1.62
LRCH3-215	ENST00000476664	GABRA1	P14867	456 aa		4.91	□□□□□ -1.62
LRCH3-215	ENST00000476664	CBR1	P16152	277 aa		4.91	□□□□□ -1.62
LRCH3-215	ENST00000476664	ELK4	P28324	431 aa		4.91	□□□□□ -1.62
LRCH3-215	ENST00000476664	GRB2	P62993	217 aa	Known RBP	4.91	□□□□□ -1.62
LRCH3-215	ENST00000476664	S100A12	P80511	92 aa		4.91	□□□□□ -1.62
LRCH3-215	ENST00000476664	ERCC8	Q13216	396 aa		4.91	□□□□□ -1.62
LRCH3-215	ENST00000476664	IHH	Q14623	411 aa		4.91	□□□□□ -1.62
LRCH3-215	ENST00000476664	LIN52	Q52LA3	116 aa		4.91	□□□□□ -1.62
LRCH3-215	ENST00000476664	UBE2NL	Q5JXB2	153 aa		4.91	□□□□□ -1.62
LRCH3-215	ENST00000476664	ACP7	Q6ZNF0	438 aa		4.91	□□□□□ -1.62
LRCH3-215	ENST00000476664	ZNF497	Q6ZNH5	498 aa		4.91	□□□□□ -1.62
LRCH3-215	ENST00000476664	OLIG3	Q7RTU3	272 aa		4.91	□□□□□ -1.62
LRCH3-215	ENST00000476664	NAA40	Q86UY6	237 aa		4.91	□□□□□ -1.62
LRCH3-215	ENST00000476664	C14orf178	Q8N769	122 aa	Predicted RBP	4.91	□□□□□ -1.62
LRCH3-215	ENST00000476664	POM121L12	Q8N7R1	296 aa		4.91	□□□□□ -1.62
LRCH3-215	ENST00000476664	OR1J4	Q8NGS1	313 aa		4.91	□□□□□ -1.62
LRCH3-215	ENST00000476664	FAM104A	Q969W3	186 aa		4.91	□□□□□ -1.62
LRCH3-215	ENST00000476664	PTX4	Q96A99	478 aa		4.91	□□□□□ -1.62
LRCH3-215	ENST00000476664	VOPP1	Q96AW1	172 aa		4.91	□□□□□ -1.62
LRCH3-215	ENST00000476664	BATF3	Q9NR55	127 aa		4.91	□□□□□ -1.62
LRCH3-215	ENST00000476664	ZNF223	Q9UK11	482 aa	Predicted RBP	4.91	□□□□□ -1.62
LRCH3-215	ENST00000476664	CPAMD8	Q8IZJ3	1885 aa		4.91	□□□□□ -1.62
LRCH3-215	ENST00000476664	NOTCH3	Q9UM47	2321 aa		4.91	□□□□□ -1.62
LRCH3-215	ENST00000476664	DNAJC13	O75165	2243 aa		4.91	□□□□□ -1.62
LRCH3-215	ENST00000476664	HEATR5A	Q86XA9	2040 aa		4.9	□□□□□ -1.62
LRCH3-215	ENST00000476664	ROS1	P08922	2347 aa		4.9	□□□□□ -1.62
LRCH3-215	ENST00000476664		A0A1B0GV72	72 aa		4.9	□□□□□ -1.63
LRCH3-215	ENST00000476664	EVPLL	A8MZ36	301 aa		4.9	□□□□□ -1.63
LRCH3-215	ENST00000476664	DISC1	C4P0D8	188 aa		4.9	□□□□□ -1.63
LRCH3-215	ENST00000476664	FFAR1	O14842	300 aa		4.9	□□□□□ -1.63
LRCH3-215	ENST00000476664	KLRC4	O43908	158 aa		4.9	□□□□□ -1.63
LRCH3-215	ENST00000476664	ZNF354A	O60765	605 aa	Predicted RBP	4.9	□□□□□ -1.63
LRCH3-215	ENST00000476664	STATH	P02808	62 aa		4.9	□□□□□ -1.63
LRCH3-215	ENST00000476664	CD36	P16671	472 aa		4.9	□□□□□ -1.63
LRCH3-215	ENST00000476664	DDT	P30046	118 aa		4.9	□□□□□ -1.63
LRCH3-215	ENST00000476664	CTRL	P40313	264 aa		4.9	□□□□□ -1.63
LRCH3-215	ENST00000476664	RAB4B	P61018	213 aa		4.9	□□□□□ -1.63
LRCH3-215	ENST00000476664	EBP	Q15125	230 aa	Known RBP	4.9	□□□□□ -1.63
LRCH3-215	ENST00000476664	BATF	Q16520	125 aa		4.9	□□□□□ -1.63
LRCH3-215	ENST00000476664	TMEM183B	Q1AE95	376 aa		4.9	□□□□□ -1.63
LRCH3-215	ENST00000476664	ATAD3C	Q5T2N8	411 aa		4.9	□□□□□ -1.63
LRCH3-215	ENST00000476664	XP32	Q5T750	250 aa		4.9	□□□□□ -1.63
LRCH3-215	ENST00000476664	ZNF544	Q6NX49	715 aa		4.9	□□□□□ -1.63
LRCH3-215	ENST00000476664	FBXL22	Q6P050	247 aa		4.9	□□□□□ -1.63
LRCH3-215	ENST00000476664	TMEM183A	Q8IXX5	376 aa		4.9	□□□□□ -1.63
LRCH3-215	ENST00000476664	RPRML	Q8N4K4	120 aa		4.9	□□□□□ -1.63
LRCH3-215	ENST00000476664	ARIH2OS	Q8N7S6	290 aa		4.9	□□□□□ -1.63
LRCH3-215	ENST00000476664	OR4M2	Q8NGB6	313 aa		4.9	□□□□□ -1.63
LRCH3-215	ENST00000476664	OR5K1	Q8NHB7	308 aa		4.9	□□□□□ -1.63
LRCH3-215	ENST00000476664	ORAOV1	Q8WV07	137 aa		4.9	□□□□□ -1.63
LRCH3-215	ENST00000476664	GHSR	Q92847	366 aa		4.9	□□□□□ -1.63
LRCH3-215	ENST00000476664	TM4SF18	Q96CE8	201 aa		4.9	□□□□□ -1.63
LRCH3-215	ENST00000476664	PRSS27	Q9BQR3	290 aa		4.9	□□□□□ -1.63
LRCH3-215	ENST00000476664	RTBDN	Q9BSG5	229 aa	Predicted RBP	4.9	□□□□□ -1.63
LRCH3-215	ENST00000476664	DEFB126	Q9BYW3	111 aa		4.9	□□□□□ -1.63
LRCH3-215	ENST00000476664	TXNIP	Q9H3M7	391 aa		4.9	□□□□□ -1.63
LRCH3-215	ENST00000476664	NMNAT1	Q9HAN9	279 aa	Predicted RBP	4.9	□□□□□ -1.63
LRCH3-215	ENST00000476664	PAK5	Q9P286	719 aa		4.9	□□□□□ -1.63
LRCH3-215	ENST00000476664	YLPM1	P49750	1951 aa	Known RBP	4.89	□□□□□ -1.63
LRCH3-215	ENST00000476664	KRBOX1	C9JBD0	128 aa		4.89	□□□□□ -1.63
LRCH3-215	ENST00000476664	NDUFC2-KCTD14	E9PQ53	114 aa		4.89	□□□□□ -1.63
LRCH3-215	ENST00000476664		M0QYV0	167 aa		4.89	□□□□□ -1.63
LRCH3-215	ENST00000476664	CHP2	O43745	196 aa		4.89	□□□□□ -1.63
LRCH3-215	ENST00000476664	CA11	O75493	328 aa		4.89	□□□□□ -1.63
LRCH3-215	ENST00000476664	SERPINB7	O75635	380 aa		4.89	□□□□□ -1.63
LRCH3-215	ENST00000476664	OR2A4	O95047	310 aa		4.89	□□□□□ -1.63
LRCH3-215	ENST00000476664	SLC25A14	O95258	325 aa	Predicted RBP	4.89	□□□□□ -1.63
LRCH3-215	ENST00000476664	TMEM33	P57088	247 aa		4.89	□□□□□ -1.63
LRCH3-215	ENST00000476664	PSME3	P61289	254 aa		4.89	□□□□□ -1.63
LRCH3-215	ENST00000476664	DAD1	P61803	113 aa		4.89	□□□□□ -1.63
LRCH3-215	ENST00000476664	EMX1	Q04741	257 aa	Predicted RBP	4.89	□□□□□ -1.63
LRCH3-215	ENST00000476664	KRTAP27-1	Q3LI81	207 aa		4.89	□□□□□ -1.63
LRCH3-215	ENST00000476664	PYCR3	Q53H96	274 aa		4.89	□□□□□ -1.63
LRCH3-215	ENST00000476664	ACSBG2	Q5FVE4	666 aa		4.89	□□□□□ -1.63
LRCH3-215	ENST00000476664	SLC25A30	Q5SVS4	291 aa		4.89	□□□□□ -1.63
LRCH3-215	ENST00000476664	C6orf52	Q5T4I8	152 aa		4.89	□□□□□ -1.63
LRCH3-215	ENST00000476664	ZNF684	Q5T5D7	378 aa		4.89	□□□□□ -1.63
LRCH3-215	ENST00000476664	FAM71E1	Q6IPT2	247 aa		4.89	□□□□□ -1.63
LRCH3-215	ENST00000476664	SFXN4	Q6P4A7	337 aa		4.89	□□□□□ -1.63

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