RNA–Protein interactions for RNA: ENST00000476464.5

PSMD6-206, Transcript of proteasome 26S subunit, non-ATPase 6, human

TSL 2

Gene PSMD6, Length 2,052 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD6-206	ENST00000476464	PPIAL4A	Q9Y536	164 aa		13.67	□□□□□ -0.22
PSMD6-206	ENST00000476464	LINC00312	Q9Y6C7	94 aa		13.67	□□□□□ -0.22
PSMD6-206	ENST00000476464	TRAV3	A0A0B4J244	114 aa		13.66	□□□□□ -0.22
PSMD6-206	ENST00000476464	TRAV1-1	A0A0B4J248	108 aa		13.66	□□□□□ -0.22
PSMD6-206	ENST00000476464	FAM90A27P	A6NNH2	459 aa		13.66	□□□□□ -0.22
PSMD6-206	ENST00000476464	PMS2P5	A8MQ11	134 aa		13.66	□□□□□ -0.22
PSMD6-206	ENST00000476464		H7C2Y5	167 aa		13.66	□□□□□ -0.22
PSMD6-206	ENST00000476464	THBS3	P49746	956 aa		13.66	□□□□□ -0.22
PSMD6-206	ENST00000476464	FGF8	P55075	233 aa	Predicted RBP	13.66	□□□□□ -0.22
PSMD6-206	ENST00000476464	ERVFRD-1	P60508	538 aa		13.66	□□□□□ -0.22
PSMD6-206	ENST00000476464	SPCS3	P61009	180 aa		13.66	□□□□□ -0.22
PSMD6-206	ENST00000476464	HFE	Q30201	348 aa		13.66	□□□□□ -0.22
PSMD6-206	ENST00000476464	ZNF251	Q9BRH9	671 aa		13.66	□□□□□ -0.22
PSMD6-206	ENST00000476464	HIPK2	Q9H2X6	1198 aa		13.66	□□□□□ -0.22
PSMD6-206	ENST00000476464	SMCO4	Q9NRQ5	59 aa		13.66	□□□□□ -0.22
PSMD6-206	ENST00000476464	TMEM106B	Q9NUM4	274 aa		13.66	□□□□□ -0.22
PSMD6-206	ENST00000476464	RPUSD1	Q9UJJ7	312 aa	Known RBP	13.66	□□□□□ -0.22
PSMD6-206	ENST00000476464	DSCAML1	Q8TD84	2053 aa		13.66	□□□□□ -0.22
PSMD6-206	ENST00000476464	TANC2	Q9HCD6	1990 aa		13.65	□□□□□ -0.22
PSMD6-206	ENST00000476464	SCAF4	O95104	1147 aa	Known RBP	13.65	□□□□□ -0.22
PSMD6-206	ENST00000476464	FBP1	P09467	338 aa		13.65	□□□□□ -0.22
PSMD6-206	ENST00000476464	ZNF506	Q5JVG8	444 aa		13.65	□□□□□ -0.22
PSMD6-206	ENST00000476464	SSX7	Q7RTT5	188 aa		13.65	□□□□□ -0.22
PSMD6-206	ENST00000476464	ZNF383	Q8NA42	475 aa		13.65	□□□□□ -0.22
PSMD6-206	ENST00000476464	GAL3ST2	Q9H3Q3	398 aa		13.65	□□□□□ -0.22
PSMD6-206	ENST00000476464	HEYL	Q9NQ87	328 aa	Predicted RBP	13.65	□□□□□ -0.22
PSMD6-206	ENST00000476464	ZNRD1	Q9P1U0	126 aa		13.65	□□□□□ -0.22
PSMD6-206	ENST00000476464	PUS1	Q9Y606	427 aa	Known RBP eCLIP	13.65	□□□□□ -0.22
PSMD6-206	ENST00000476464	SPTBN4	Q9H254	2564 aa		13.65	□□□□□ -0.22
PSMD6-206	ENST00000476464	C7orf77	A4D0Y5	90 aa		13.65	□□□□□ -0.22
PSMD6-206	ENST00000476464	C15orf62	A8K5M9	175 aa		13.65	□□□□□ -0.22
PSMD6-206	ENST00000476464	IFNA10	P01566	189 aa		13.65	□□□□□ -0.22
PSMD6-206	ENST00000476464	CD3E	P07766	207 aa		13.65	□□□□□ -0.22
PSMD6-206	ENST00000476464	RELB	Q01201	579 aa		13.65	□□□□□ -0.22
PSMD6-206	ENST00000476464	TFF3	Q07654	80 aa		13.65	□□□□□ -0.22
PSMD6-206	ENST00000476464	TMEM30B	Q3MIR4	351 aa		13.65	□□□□□ -0.22
PSMD6-206	ENST00000476464	AARD	Q4LEZ3	155 aa		13.65	□□□□□ -0.22
PSMD6-206	ENST00000476464	H1FX	Q92522	213 aa	Known RBP	13.65	□□□□□ -0.22
PSMD6-206	ENST00000476464	ADTRP	Q96IZ2	230 aa		13.65	□□□□□ -0.22
PSMD6-206	ENST00000476464	RHOV	Q96L33	236 aa		13.65	□□□□□ -0.22
PSMD6-206	ENST00000476464	TIMM9	Q9Y5J7	89 aa		13.65	□□□□□ -0.22
PSMD6-206	ENST00000476464	ZFP92	A6NM28	416 aa		13.64	□□□□□ -0.23
PSMD6-206	ENST00000476464	GNB2	P62879	340 aa		13.64	□□□□□ -0.23
PSMD6-206	ENST00000476464	LINC01560	Q8TB33	94 aa		13.64	□□□□□ -0.23
PSMD6-206	ENST00000476464	UNKL	Q9H9P5	680 aa	Known RBP	13.64	□□□□□ -0.23
PSMD6-206	ENST00000476464	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	13.63	□□□□□ -0.23
PSMD6-206	ENST00000476464	CCL21	O00585	134 aa		13.63	□□□□□ -0.23
PSMD6-206	ENST00000476464	EIF3G	O75821	320 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
PSMD6-206	ENST00000476464	HSPB1	P04792	205 aa	Known RBP	13.63	□□□□□ -0.23
PSMD6-206	ENST00000476464	SRP19	P09132	144 aa	Known RBP	13.63	□□□□□ -0.23
PSMD6-206	ENST00000476464	DAO	P14920	347 aa		13.63	□□□□□ -0.23
PSMD6-206	ENST00000476464	CCL3L1	P16619	93 aa		13.63	□□□□□ -0.23
PSMD6-206	ENST00000476464	CA7	P43166	264 aa		13.63	□□□□□ -0.23
PSMD6-206	ENST00000476464	RPP30	P78346	268 aa	Known RBP	13.63	□□□□□ -0.23
PSMD6-206	ENST00000476464	MEF2C	Q06413	473 aa	Predicted RBP	13.63	□□□□□ -0.23
PSMD6-206	ENST00000476464	SMUG1	Q53HV7	270 aa		13.63	□□□□□ -0.23
PSMD6-206	ENST00000476464	SLC25A48	Q6ZT89	311 aa	Known RBP	13.63	□□□□□ -0.23
PSMD6-206	ENST00000476464	CYB561D1	Q8N8Q1	229 aa		13.63	□□□□□ -0.23
PSMD6-206	ENST00000476464	ZNF709	Q8N972	641 aa		13.63	□□□□□ -0.23
PSMD6-206	ENST00000476464	MBD3L1	Q8WWY6	194 aa		13.63	□□□□□ -0.23
PSMD6-206	ENST00000476464	HCFC1	P51610	2035 aa		13.63	□□□□□ -0.23
PSMD6-206	ENST00000476464	MAP1LC3B2	A6NCE7	125 aa		13.63	□□□□□ -0.23
PSMD6-206	ENST00000476464	HOXA1	P49639	335 aa	Predicted RBP	13.63	□□□□□ -0.23
PSMD6-206	ENST00000476464	KLRB1	Q12918	225 aa		13.63	□□□□□ -0.23
PSMD6-206	ENST00000476464	OR4A47	Q6IF82	309 aa		13.63	□□□□□ -0.23
PSMD6-206	ENST00000476464	ACSM6	Q6P461	480 aa		13.63	□□□□□ -0.23
PSMD6-206	ENST00000476464	LYPD2	Q6UXB3	125 aa		13.63	□□□□□ -0.23
PSMD6-206	ENST00000476464	OR52E5	Q8NH55	327 aa		13.63	□□□□□ -0.23
PSMD6-206	ENST00000476464	ZCCHC14	Q8WYQ9	949 aa	Known RBP	13.63	□□□□□ -0.23
PSMD6-206	ENST00000476464	ZNF714	Q96N38	554 aa		13.63	□□□□□ -0.23
PSMD6-206	ENST00000476464	NPCDR1	Q9BY65	106 aa		13.63	□□□□□ -0.23
PSMD6-206	ENST00000476464	MAP1LC3B	Q9GZQ8	125 aa		13.63	□□□□□ -0.23
PSMD6-206	ENST00000476464	MS4A5	Q9H3V2	200 aa		13.63	□□□□□ -0.23
PSMD6-206	ENST00000476464	MLX	Q9UH92	298 aa		13.63	□□□□□ -0.23
PSMD6-206	ENST00000476464	POLE	Q07864	2286 aa		13.62	□□□□□ -0.23
PSMD6-206	ENST00000476464	LOC102723971	A0A1B0GUV8	181 aa		13.62	□□□□□ -0.23
PSMD6-206	ENST00000476464	NDUFB3	O43676	98 aa		13.62	□□□□□ -0.23
PSMD6-206	ENST00000476464	FCN3	O75636	299 aa		13.62	□□□□□ -0.23
PSMD6-206	ENST00000476464	LY86	O95711	162 aa		13.62	□□□□□ -0.23
PSMD6-206	ENST00000476464	ARG1	P05089	322 aa		13.62	□□□□□ -0.23
PSMD6-206	ENST00000476464	APOBEC3A	P31941	199 aa	Predicted RBP	13.62	□□□□□ -0.23
PSMD6-206	ENST00000476464	VWC2	Q2TAL6	325 aa		13.62	□□□□□ -0.23
PSMD6-206	ENST00000476464	KHDC3L	Q587J8	217 aa		13.62	□□□□□ -0.23
PSMD6-206	ENST00000476464	LRRC10	Q5BKY1	277 aa		13.62	□□□□□ -0.23
PSMD6-206	ENST00000476464	FFAR4	Q5NUL3	377 aa		13.62	□□□□□ -0.23
PSMD6-206	ENST00000476464	TMEM200B	Q69YZ2	307 aa		13.62	□□□□□ -0.23
PSMD6-206	ENST00000476464	KDF1	Q8NAX2	398 aa	Predicted RBP	13.62	□□□□□ -0.23
PSMD6-206	ENST00000476464	SLC39A9	Q9NUM3	307 aa		13.62	□□□□□ -0.23
PSMD6-206	ENST00000476464	YLPM1	P49750	1951 aa	Known RBP	13.62	□□□□□ -0.23
PSMD6-206	ENST00000476464	SMCO3	A2RU48	225 aa		13.62	□□□□□ -0.23
PSMD6-206	ENST00000476464	PLAU	P00749	431 aa		13.62	□□□□□ -0.23
PSMD6-206	ENST00000476464	IGKV1D-33	P01593	117 aa		13.62	□□□□□ -0.23
PSMD6-206	ENST00000476464	IGKV1-33	P01594	117 aa		13.62	□□□□□ -0.23
PSMD6-206	ENST00000476464	GRN	P28799	593 aa	Known RBP	13.62	□□□□□ -0.23
PSMD6-206	ENST00000476464	RHEB	Q15382	184 aa		13.62	□□□□□ -0.23
PSMD6-206	ENST00000476464	CENPV	Q7Z7K6	275 aa	Predicted RBP	13.62	□□□□□ -0.23
PSMD6-206	ENST00000476464	RPP25L	Q8N5L8	163 aa	Known RBP	13.62	□□□□□ -0.23
PSMD6-206	ENST00000476464	TCF19	Q9Y242	345 aa		13.62	□□□□□ -0.23
PSMD6-206	ENST00000476464	C15orf61	A6NNL5	157 aa		13.61	□□□□□ -0.23
PSMD6-206	ENST00000476464	HRAS	P01112	189 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms