RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 H0Y8X5 98 aa11.6□□□□□ -0.55
HDAC1-206ENST00000476391 GATA2P23769 480 aaPredicted RBP11.6□□□□□ -0.55
HDAC1-206ENST00000476391 CEACAM3P40198 252 aa11.6□□□□□ -0.55
HDAC1-206ENST00000476391 KLF5Q13887 457 aaPredicted RBP11.6□□□□□ -0.55
HDAC1-206ENST00000476391 SLC25A53Q5H9E4 307 aa11.6□□□□□ -0.55
HDAC1-206ENST00000476391 PLCXD3Q63HM9 321 aa11.6□□□□□ -0.55
HDAC1-206ENST00000476391 LHX8Q68G74 356 aa11.6□□□□□ -0.55
HDAC1-206ENST00000476391 RASL11AQ6T310 242 aa11.6□□□□□ -0.55
HDAC1-206ENST00000476391 UBALD2Q8IYN6 164 aa11.6□□□□□ -0.55
HDAC1-206ENST00000476391 OR5A2Q8NGI9 324 aa11.6□□□□□ -0.55
HDAC1-206ENST00000476391 NABP1Q96AH0 204 aa11.6□□□□□ -0.55
HDAC1-206ENST00000476391 KMT2EQ8IZD2 1858 aa11.6□□□□□ -0.55
HDAC1-206ENST00000476391 C2orf72A6NCS6 295 aa11.59□□□□□ -0.55
HDAC1-206ENST00000476391 RAB29O14966 203 aa11.59□□□□□ -0.55
HDAC1-206ENST00000476391 SPINK4O60575 86 aa11.59□□□□□ -0.55
HDAC1-206ENST00000476391 HAND1O96004 215 aa11.59□□□□□ -0.55
HDAC1-206ENST00000476391 CRYGSP22914 178 aa11.59□□□□□ -0.55
HDAC1-206ENST00000476391 FGFRL1Q8N441 504 aa11.59□□□□□ -0.55
HDAC1-206ENST00000476391 PPIAL4EA0A075B759 164 aa11.59□□□□□ -0.55
HDAC1-206ENST00000476391 PPIAL4CA0A0B4J2A2 164 aa11.59□□□□□ -0.55
HDAC1-206ENST00000476391 FAM231BA6NCW3 169 aa11.59□□□□□ -0.55
HDAC1-206ENST00000476391 SHISA8B8ZZ34 492 aa11.59□□□□□ -0.55
HDAC1-206ENST00000476391 PPIAL4DF5H284 164 aa11.59□□□□□ -0.55
HDAC1-206ENST00000476391 PPIAL4FP0DN26 164 aa11.59□□□□□ -0.55
HDAC1-206ENST00000476391 ZNF157P51786 506 aaPredicted RBP11.59□□□□□ -0.55
HDAC1-206ENST00000476391 LMX1AQ8TE12 382 aa11.59□□□□□ -0.55
HDAC1-206ENST00000476391 SAP30LQ9HAJ7 183 aa11.59□□□□□ -0.55
HDAC1-206ENST00000476391 GP6Q9HCN6 339 aa11.59□□□□□ -0.55
HDAC1-206ENST00000476391 SCRT2Q9NQ03 307 aa11.59□□□□□ -0.55
HDAC1-206ENST00000476391 TP73-AS1Q9UF72 201 aa11.59□□□□□ -0.55
HDAC1-206ENST00000476391 C19orf25Q9UFG5 118 aaPredicted RBP11.59□□□□□ -0.55
HDAC1-206ENST00000476391 WDR83OSQ9Y284 106 aa11.59□□□□□ -0.55
HDAC1-206ENST00000476391 ARL2-SNX15V9GYD0 113 aa11.59□□□□□ -0.55
HDAC1-206ENST00000476391 XIRP2A4UGR9 3374 aa11.59□□□□□ -0.55
HDAC1-206ENST00000476391 GOSR1O95249 250 aa11.58□□□□□ -0.56
HDAC1-206ENST00000476391 IGLV2-14P01704 120 aa11.58□□□□□ -0.56
HDAC1-206ENST00000476391 OTX2P32243 289 aa11.58□□□□□ -0.56
HDAC1-206ENST00000476391 SYT13Q7L8C5 426 aa11.58□□□□□ -0.56
HDAC1-206ENST00000476391 AP1S3Q96PC3 154 aa11.58□□□□□ -0.56
HDAC1-206ENST00000476391 NPVFQ9HCQ7 196 aa11.58□□□□□ -0.56
HDAC1-206ENST00000476391 C2orf16Q68DN1 1984 aa11.58□□□□□ -0.56
HDAC1-206ENST00000476391 TRBV6-6A0A0A6YYG2 114 aa11.58□□□□□ -0.56
HDAC1-206ENST00000476391 K7EP34 96 aa11.58□□□□□ -0.56
HDAC1-206ENST00000476391 GCSAMLQ5JQS6 135 aa11.58□□□□□ -0.56
HDAC1-206ENST00000476391 BHLHA15Q7RTS1 189 aaPredicted RBP11.58□□□□□ -0.56
HDAC1-206ENST00000476391 SPATA12Q7Z6I5 190 aa11.58□□□□□ -0.56
HDAC1-206ENST00000476391 SFTPA2Q8IWL1 248 aa11.58□□□□□ -0.56
HDAC1-206ENST00000476391 OR1F12Q8NHA8 337 aa11.58□□□□□ -0.56
HDAC1-206ENST00000476391 WIPF2Q8TF74 440 aaPredicted RBP11.58□□□□□ -0.56
HDAC1-206ENST00000476391 TMEM45BQ96B21 275 aa11.58□□□□□ -0.56
HDAC1-206ENST00000476391 SIGMAR1Q99720 223 aa11.58□□□□□ -0.56
HDAC1-206ENST00000476391 MS4A6AQ9H2W1 248 aa11.58□□□□□ -0.56
HDAC1-206ENST00000476391 SMIM27A0A1W2PRY6 76 aa11.57□□□□□ -0.56
HDAC1-206ENST00000476391 NPIPB11E5RHQ5 1161 aa11.57□□□□□ -0.56
HDAC1-206ENST00000476391 MPDU1O75352 247 aa11.57□□□□□ -0.56
HDAC1-206ENST00000476391 SRFP11831 508 aa11.57□□□□□ -0.56
HDAC1-206ENST00000476391 AZU1P20160 251 aa11.57□□□□□ -0.56
HDAC1-206ENST00000476391 FGF12P61328 243 aa11.57□□□□□ -0.56
HDAC1-206ENST00000476391 OR10W1Q8NGF6 305 aa11.57□□□□□ -0.56
HDAC1-206ENST00000476391 TNFRSF19Q9NS68 423 aa11.57□□□□□ -0.56
HDAC1-206ENST00000476391 YTHDF2Q9Y5A9 579 aaKnown RBP11.57□□□□□ -0.56
HDAC1-206ENST00000476391 EXPH5Q8NEV8 1989 aa11.57□□□□□ -0.56
HDAC1-206ENST00000476391 A0A1W2PNR3 127 aa11.57□□□□□ -0.56
HDAC1-206ENST00000476391 C9orf118A6NHY6 69 aa11.57□□□□□ -0.56
HDAC1-206ENST00000476391 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.57□□□□□ -0.56
HDAC1-206ENST00000476391 ISLRO14498 428 aa11.57□□□□□ -0.56
HDAC1-206ENST00000476391 USF1P22415 310 aaPredicted RBP11.57□□□□□ -0.56
HDAC1-206ENST00000476391 GPR183P32249 361 aa11.57□□□□□ -0.56
HDAC1-206ENST00000476391 SLAQ13239 276 aa11.57□□□□□ -0.56
HDAC1-206ENST00000476391 FAM162BQ5T6X4 162 aa11.57□□□□□ -0.56
HDAC1-206ENST00000476391 SPACA3Q8IXA5 215 aa11.57□□□□□ -0.56
HDAC1-206ENST00000476391 TMEM54Q969K7 222 aa11.57□□□□□ -0.56
HDAC1-206ENST00000476391 ZNF331Q9NQX6 463 aaPredicted RBP11.57□□□□□ -0.56
HDAC1-206ENST00000476391 CRIM1Q9NZV1 1036 aa11.57□□□□□ -0.56
HDAC1-206ENST00000476391 AREGP15514 252 aa11.56□□□□□ -0.56
HDAC1-206ENST00000476391 GNG4P50150 75 aa11.56□□□□□ -0.56
HDAC1-206ENST00000476391 SLC35B1P78383 322 aa11.56□□□□□ -0.56
HDAC1-206ENST00000476391 CCL7P80098 99 aa11.56□□□□□ -0.56
HDAC1-206ENST00000476391 HHEXQ03014 270 aa11.56□□□□□ -0.56
HDAC1-206ENST00000476391 OR5A1Q8NGJ0 315 aa11.56□□□□□ -0.56
HDAC1-206ENST00000476391 SPSB4Q96A44 273 aa11.56□□□□□ -0.56
HDAC1-206ENST00000476391 ZNF48Q96MX3 618 aaPredicted RBP11.56□□□□□ -0.56
HDAC1-206ENST00000476391 TMEM191AQ9H0A3 160 aa11.56□□□□□ -0.56
HDAC1-206ENST00000476391 CLEC5AQ9NY25 188 aa11.56□□□□□ -0.56
HDAC1-206ENST00000476391 TECRQ9NZ01 308 aaKnown RBP11.56□□□□□ -0.56
HDAC1-206ENST00000476391 MTCH1Q9NZJ7 389 aa11.56□□□□□ -0.56
HDAC1-206ENST00000476391 PPP1R3CQ9UQK1 317 aa11.56□□□□□ -0.56
HDAC1-206ENST00000476391 LRP4O75096 1905 aa11.56□□□□□ -0.56
HDAC1-206ENST00000476391 hCG_38984A0A1B0GV85 526 aa11.56□□□□□ -0.56
HDAC1-206ENST00000476391 IZUMO1RA6ND01 250 aa11.56□□□□□ -0.56
HDAC1-206ENST00000476391 LRRC30A6NM36 301 aa11.56□□□□□ -0.56
HDAC1-206ENST00000476391 H3BRM9 83 aa11.56□□□□□ -0.56
HDAC1-206ENST00000476391 HNRNPA1P09651 372 aaKnown RBP eCLIP11.56□□□□□ -0.56
HDAC1-206ENST00000476391 OPRK1P41145 380 aa11.56□□□□□ -0.56
HDAC1-206ENST00000476391 EDDM3BP56851 147 aa11.56□□□□□ -0.56
HDAC1-206ENST00000476391 RAB30Q15771 203 aa11.56□□□□□ -0.56
HDAC1-206ENST00000476391 PIGCQ92535 297 aa11.56□□□□□ -0.56
HDAC1-206ENST00000476391 PMCHL2Q9BQD1 86 aa11.56□□□□□ -0.56
HDAC1-206ENST00000476391 FNDC4Q9H6D8 234 aaPredicted RBP11.56□□□□□ -0.56
HDAC1-206ENST00000476391 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms