RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 GNB1LQ9BYB4 327 aa12.22□□□□□ -0.45
SAMM50-203ENST00000474323 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.21□□□□□ -0.45
SAMM50-203ENST00000474323 LGALS4P56470 323 aa12.21□□□□□ -0.45
SAMM50-203ENST00000474323 TFF3Q07654 80 aa12.21□□□□□ -0.45
SAMM50-203ENST00000474323 FBLN7Q53RD9 439 aa12.21□□□□□ -0.45
SAMM50-203ENST00000474323 OR10J3Q5JRS4 329 aa12.21□□□□□ -0.45
SAMM50-203ENST00000474323 SMIM15Q7Z3B0 74 aa12.21□□□□□ -0.45
SAMM50-203ENST00000474323 OR4C5Q8NGB2 326 aa12.21□□□□□ -0.45
SAMM50-203ENST00000474323 OR5B3Q8NH48 314 aa12.21□□□□□ -0.45
SAMM50-203ENST00000474323 OCC1Q8TAD7 63 aa12.21□□□□□ -0.45
SAMM50-203ENST00000474323 HS3ST6Q96QI5 342 aa12.21□□□□□ -0.45
SAMM50-203ENST00000474323 GNB4Q9HAV0 340 aa12.21□□□□□ -0.45
SAMM50-203ENST00000474323 IL19Q9UHD0 177 aa12.21□□□□□ -0.45
SAMM50-203ENST00000474323 CDC42EP3Q9UKI2 254 aa12.21□□□□□ -0.45
SAMM50-203ENST00000474323 PPP1R3CQ9UQK1 317 aa12.21□□□□□ -0.45
SAMM50-203ENST00000474323 CELA2AP08217 269 aa12.21□□□□□ -0.46
SAMM50-203ENST00000474323 TSPOP30536 169 aa12.21□□□□□ -0.46
SAMM50-203ENST00000474323 AMTP48728 403 aa12.21□□□□□ -0.46
SAMM50-203ENST00000474323 PRRX1P54821 245 aa12.21□□□□□ -0.46
SAMM50-203ENST00000474323 PSG4Q00888 419 aa12.21□□□□□ -0.46
SAMM50-203ENST00000474323 UNQ5815/PRO19632Q6UWF5 114 aa12.21□□□□□ -0.46
SAMM50-203ENST00000474323 MCEMP1Q8IX19 187 aa12.21□□□□□ -0.46
SAMM50-203ENST00000474323 OR5A2Q8NGI9 324 aa12.21□□□□□ -0.46
SAMM50-203ENST00000474323 APOBEC3DQ96AK3 386 aaPredicted RBP12.21□□□□□ -0.46
SAMM50-203ENST00000474323 TMEM38BQ9NVV0 291 aa12.21□□□□□ -0.46
SAMM50-203ENST00000474323 DPRXA6NFQ7 191 aa12.2□□□□□ -0.46
SAMM50-203ENST00000474323 SNURFLB1AK76 121 aa12.2□□□□□ -0.46
SAMM50-203ENST00000474323 ZFAND5O76080 213 aa12.2□□□□□ -0.46
SAMM50-203ENST00000474323 PCOLCEQ15113 449 aa12.2□□□□□ -0.46
SAMM50-203ENST00000474323 LINC00596Q86U02 117 aa12.2□□□□□ -0.46
SAMM50-203ENST00000474323 GCNT2Q8N0V5 402 aa12.2□□□□□ -0.46
SAMM50-203ENST00000474323 DEFB126Q9BYW3 111 aa12.2□□□□□ -0.46
SAMM50-203ENST00000474323 IER3P46695 156 aa12.2□□□□□ -0.46
SAMM50-203ENST00000474323 HINT1P49773 126 aaPredicted RBP12.2□□□□□ -0.46
SAMM50-203ENST00000474323 RPL19P84098 196 aaKnown RBP12.2□□□□□ -0.46
SAMM50-203ENST00000474323 TIPARPQ7Z3E1 657 aaKnown RBP12.2□□□□□ -0.46
SAMM50-203ENST00000474323 MKXQ8IYA7 352 aa12.2□□□□□ -0.46
SAMM50-203ENST00000474323 PNKDQ8N490 385 aa12.2□□□□□ -0.46
SAMM50-203ENST00000474323 KCNS1Q96KK3 526 aa12.2□□□□□ -0.46
SAMM50-203ENST00000474323 SFXN3Q9BWM7 321 aa12.2□□□□□ -0.46
SAMM50-203ENST00000474323 IL36RNQ9UBH0 155 aa12.2□□□□□ -0.46
SAMM50-203ENST00000474323 CNTRLQ7Z7A1 2325 aa12.2□□□□□ -0.46
SAMM50-203ENST00000474323 CELSR3Q9NYQ7 3312 aa12.2□□□□□ -0.46
SAMM50-203ENST00000474323 TRAPPC2LH3BP13 241 aa12.19□□□□□ -0.46
SAMM50-203ENST00000474323 MT-ND6P03923 174 aa12.19□□□□□ -0.46
SAMM50-203ENST00000474323 PATE4P0C8F1 98 aa12.19□□□□□ -0.46
SAMM50-203ENST00000474323 DEFA4P12838 97 aa12.19□□□□□ -0.46
SAMM50-203ENST00000474323 TNFSF4P23510 183 aa12.19□□□□□ -0.46
SAMM50-203ENST00000474323 RNF151Q2KHN1 245 aa12.19□□□□□ -0.46
SAMM50-203ENST00000474323 OR2Y1Q8NGV0 311 aa12.19□□□□□ -0.46
SAMM50-203ENST00000474323 FAM122AQ96E09 287 aa12.19□□□□□ -0.46
SAMM50-203ENST00000474323 OR2H1Q9GZK4 316 aa12.19□□□□□ -0.46
SAMM50-203ENST00000474323 MTCH1Q9NZJ7 389 aa12.19□□□□□ -0.46
SAMM50-203ENST00000474323 CNOT1A5YKK6 2376 aaKnown RBP12.19□□□□□ -0.46
SAMM50-203ENST00000474323 RIF1Q5UIP0 2472 aaKnown RBP12.19□□□□□ -0.46
SAMM50-203ENST00000474323 SDK2Q58EX2 2172 aa12.19□□□□□ -0.46
SAMM50-203ENST00000474323 TRAV30A0A087WSZ9 112 aa12.19□□□□□ -0.46
SAMM50-203ENST00000474323 LOC102723996A0A087X1L8 192 aa12.19□□□□□ -0.46
SAMM50-203ENST00000474323 IGHV1-45A0A0A0MS14 117 aa12.19□□□□□ -0.46
SAMM50-203ENST00000474323 IGHV2-26A0A0B4J1V2 119 aa12.19□□□□□ -0.46
SAMM50-203ENST00000474323 A0A1W2PPV4 95 aa12.19□□□□□ -0.46
SAMM50-203ENST00000474323 A0A1W2PS18 150 aa12.19□□□□□ -0.46
SAMM50-203ENST00000474323 FOLR3P41439 243 aa12.19□□□□□ -0.46
SAMM50-203ENST00000474323 THBS3P49746 956 aa12.19□□□□□ -0.46
SAMM50-203ENST00000474323 DHRS13Q6UX07 377 aa12.19□□□□□ -0.46
SAMM50-203ENST00000474323 CPT1CQ8TCG5 803 aa12.19□□□□□ -0.46
SAMM50-203ENST00000474323 IL1F10Q8WWZ1 152 aa12.19□□□□□ -0.46
SAMM50-203ENST00000474323 SPACA9Q96E40 222 aaPredicted RBP12.19□□□□□ -0.46
SAMM50-203ENST00000474323 RBM7Q9Y580 266 aaKnown RBP12.19□□□□□ -0.46
SAMM50-203ENST00000474323 EML6Q6ZMW3 1958 aa12.18□□□□□ -0.46
SAMM50-203ENST00000474323 SERTM2A0A1B0GWG4 89 aa12.18□□□□□ -0.46
SAMM50-203ENST00000474323 CYC1P08574 325 aa12.18□□□□□ -0.46
SAMM50-203ENST00000474323 COX6A1P12074 109 aa12.18□□□□□ -0.46
SAMM50-203ENST00000474323 RPS20P60866 119 aaKnown RBP12.18□□□□□ -0.46
SAMM50-203ENST00000474323 PCBD1P61457 104 aa12.18□□□□□ -0.46
SAMM50-203ENST00000474323 C19orf35Q6ZS72 473 aa12.18□□□□□ -0.46
SAMM50-203ENST00000474323 OR1A1Q9P1Q5 309 aa12.18□□□□□ -0.46
SAMM50-203ENST00000474323 LY96Q9Y6Y9 160 aa12.18□□□□□ -0.46
SAMM50-203ENST00000474323 DMXL1Q9Y485 3027 aa12.18□□□□□ -0.46
SAMM50-203ENST00000474323 TRAV34A0A0B4J273 112 aa12.18□□□□□ -0.46
SAMM50-203ENST00000474323 IGHV1-69-2A0A0G2JMI3 117 aa12.18□□□□□ -0.46
SAMM50-203ENST00000474323 A0A1W2PNU3 283 aaPredicted RBP12.18□□□□□ -0.46
SAMM50-203ENST00000474323 RNF212BA8MTL3 300 aa12.18□□□□□ -0.46
SAMM50-203ENST00000474323 ZNF324O75467 553 aaPredicted RBP12.18□□□□□ -0.46
SAMM50-203ENST00000474323 C3orf79P0CE67 100 aa12.18□□□□□ -0.46
SAMM50-203ENST00000474323 RAC3P60763 192 aa12.18□□□□□ -0.46
SAMM50-203ENST00000474323 PMCHL1Q16048 86 aa12.18□□□□□ -0.46
SAMM50-203ENST00000474323 RPEL1Q2QD12 228 aa12.18□□□□□ -0.46
SAMM50-203ENST00000474323 COX19Q49B96 90 aa12.18□□□□□ -0.46
SAMM50-203ENST00000474323 C1QTNF5Q9BXJ0 243 aa12.18□□□□□ -0.46
SAMM50-203ENST00000474323 CLN8Q9UBY8 286 aa12.18□□□□□ -0.46
SAMM50-203ENST00000474323 ZNF292O60281 2723 aa12.17□□□□□ -0.46
SAMM50-203ENST00000474323 ZFHX2Q9C0A1 2572 aaPredicted RBP12.17□□□□□ -0.46
SAMM50-203ENST00000474323 LRRC30A6NM36 301 aa12.17□□□□□ -0.46
SAMM50-203ENST00000474323 SLC17A3O00476 420 aa12.17□□□□□ -0.46
SAMM50-203ENST00000474323 S1PR2O95136 353 aa12.17□□□□□ -0.46
SAMM50-203ENST00000474323 B4GALT1P15291 398 aa12.17□□□□□ -0.46
SAMM50-203ENST00000474323 ZNF83P51522 516 aa12.17□□□□□ -0.46
SAMM50-203ENST00000474323 GPM6AP51674 278 aa12.17□□□□□ -0.46
SAMM50-203ENST00000474323 CEACAM21Q3KPI0 293 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms