RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 TCTEX1D2Q8WW35 142 aa7.85□□□□□ -1.15
SF3A3-204ENST00000462258 SRSF12Q8WXF0 261 aaKnown RBP7.85□□□□□ -1.15
SF3A3-204ENST00000462258 SNAPC3Q92966 411 aa7.85□□□□□ -1.15
SF3A3-204ENST00000462258 DLX4Q92988 240 aaPredicted RBP7.85□□□□□ -1.15
SF3A3-204ENST00000462258 RHOVQ96L33 236 aa7.85□□□□□ -1.15
SF3A3-204ENST00000462258 TMEM68Q96MH6 324 aa7.85□□□□□ -1.15
SF3A3-204ENST00000462258 HSD17B10Q99714 261 aaKnown RBP7.85□□□□□ -1.15
SF3A3-204ENST00000462258 B9D2Q9BPU9 175 aa7.85□□□□□ -1.15
SF3A3-204ENST00000462258 DCUN1D5Q9BTE7 237 aa7.85□□□□□ -1.15
SF3A3-204ENST00000462258 COA4Q9NYJ1 87 aa7.85□□□□□ -1.15
SF3A3-204ENST00000462258 TAS2R8Q9NYW2 309 aa7.85□□□□□ -1.15
SF3A3-204ENST00000462258 ZNF256Q9Y2P7 627 aaPredicted RBP7.85□□□□□ -1.15
SF3A3-204ENST00000462258 C13orf42A0A1B0GVH6 325 aa7.84□□□□□ -1.15
SF3A3-204ENST00000462258 MEIS3P1A6NDR6 274 aa7.84□□□□□ -1.15
SF3A3-204ENST00000462258 MPPED1O15442 326 aa7.84□□□□□ -1.15
SF3A3-204ENST00000462258 XRCC3O43542 346 aa7.84□□□□□ -1.15
SF3A3-204ENST00000462258 ACTL6BO94805 426 aa7.84□□□□□ -1.15
SF3A3-204ENST00000462258 LY86O95711 162 aa7.84□□□□□ -1.15
SF3A3-204ENST00000462258 PPYP01298 95 aa7.84□□□□□ -1.15
SF3A3-204ENST00000462258 HSPB1P04792 205 aaKnown RBP7.84□□□□□ -1.15
SF3A3-204ENST00000462258 FCER2P06734 321 aa7.84□□□□□ -1.15
SF3A3-204ENST00000462258 FCGR2CP31995 323 aa7.84□□□□□ -1.15
SF3A3-204ENST00000462258 RPS19P39019 145 aaKnown RBP7.84□□□□□ -1.15
SF3A3-204ENST00000462258 CBX5P45973 191 aa7.84□□□□□ -1.15
SF3A3-204ENST00000462258 EIF4EBP1Q13541 118 aaPredicted RBP7.84□□□□□ -1.15
SF3A3-204ENST00000462258 TMEM69Q5SWH9 247 aa7.84□□□□□ -1.15
SF3A3-204ENST00000462258 C10orf55Q5SWW7 151 aa7.84□□□□□ -1.15
SF3A3-204ENST00000462258 C11orf87Q6NUJ2 197 aa7.84□□□□□ -1.15
SF3A3-204ENST00000462258 ZNF429Q86V71 674 aa7.84□□□□□ -1.15
SF3A3-204ENST00000462258 SAMD12Q8N8I0 201 aa7.84□□□□□ -1.15
SF3A3-204ENST00000462258 SECTM1Q8WVN6 248 aa7.84□□□□□ -1.15
SF3A3-204ENST00000462258 TINAGL1Q9GZM7 467 aaPredicted RBP7.84□□□□□ -1.15
SF3A3-204ENST00000462258 ZNF430Q9H8G1 570 aaPredicted RBP7.84□□□□□ -1.15
SF3A3-204ENST00000462258 IFT46Q9NQC8 304 aa7.84□□□□□ -1.15
SF3A3-204ENST00000462258 HUWE1Q7Z6Z7 4374 aaKnown RBP7.83□□□□□ -1.16
SF3A3-204ENST00000462258 A0A0G2JLM5 398 aa7.83□□□□□ -1.16
SF3A3-204ENST00000462258 MSGN1A6NI15 193 aa7.83□□□□□ -1.16
SF3A3-204ENST00000462258 TRIM64CA6NLI5 447 aa7.83□□□□□ -1.16
SF3A3-204ENST00000462258 TNFSF12O43508 249 aa7.83□□□□□ -1.16
SF3A3-204ENST00000462258 BRI3O95415 125 aa7.83□□□□□ -1.16
SF3A3-204ENST00000462258 TAS2R20P59543 309 aa7.83□□□□□ -1.16
SF3A3-204ENST00000462258 FXYD4P59646 89 aa7.83□□□□□ -1.16
SF3A3-204ENST00000462258 NCS1P62166 190 aa7.83□□□□□ -1.16
SF3A3-204ENST00000462258 MSMO1Q15800 293 aa7.83□□□□□ -1.16
SF3A3-204ENST00000462258 ZNF66Q6ZN08 573 aa7.83□□□□□ -1.16
SF3A3-204ENST00000462258 MMD2Q8IY49 270 aa7.83□□□□□ -1.16
SF3A3-204ENST00000462258 VKORC1L1Q8N0U8 176 aa7.83□□□□□ -1.16
SF3A3-204ENST00000462258 ADAD2Q8NCV1 583 aaKnown RBP7.83□□□□□ -1.16
SF3A3-204ENST00000462258 VSTM2AQ8TAG5 236 aa7.83□□□□□ -1.16
SF3A3-204ENST00000462258 SLC25A46Q96AG3 418 aa7.83□□□□□ -1.16
SF3A3-204ENST00000462258 S100A16Q96FQ6 103 aaKnown RBP7.83□□□□□ -1.16
SF3A3-204ENST00000462258 GPHA2Q96T91 129 aa7.83□□□□□ -1.16
SF3A3-204ENST00000462258 RANGRFQ9HD47 186 aaPredicted RBP7.83□□□□□ -1.16
SF3A3-204ENST00000462258 ANKRD34BA5PLL1 514 aa7.82□□□□□ -1.16
SF3A3-204ENST00000462258 KBTBD11O94819 623 aa7.82□□□□□ -1.16
SF3A3-204ENST00000462258 OR9G9P0C7N8 305 aa7.82□□□□□ -1.16
SF3A3-204ENST00000462258 ZP3P21754 424 aa7.82□□□□□ -1.16
SF3A3-204ENST00000462258 KIR2DS2P43631 304 aa7.82□□□□□ -1.16
SF3A3-204ENST00000462258 HERV-K104P61576 105 aa7.82□□□□□ -1.16
SF3A3-204ENST00000462258 CATR1Q13166 79 aa7.82□□□□□ -1.16
SF3A3-204ENST00000462258 DYRK1AQ13627 763 aa7.82□□□□□ -1.16
SF3A3-204ENST00000462258 ACSM6Q6P461 480 aa7.82□□□□□ -1.16
SF3A3-204ENST00000462258 TMEM17Q86X19 198 aa7.82□□□□□ -1.16
SF3A3-204ENST00000462258 MFSD4AQ8N468 514 aa7.82□□□□□ -1.16
SF3A3-204ENST00000462258 OR5AP2Q8NGF4 316 aa7.82□□□□□ -1.16
SF3A3-204ENST00000462258 OR6Q1Q8NGQ2 317 aa7.82□□□□□ -1.16
SF3A3-204ENST00000462258 KCTD12Q96CX2 325 aaKnown RBP7.82□□□□□ -1.16
SF3A3-204ENST00000462258 SPIN2AQ99865 258 aa7.82□□□□□ -1.16
SF3A3-204ENST00000462258 SPIN2BQ9BPZ2 258 aa7.82□□□□□ -1.16
SF3A3-204ENST00000462258 FUNDC2Q9BWH2 189 aa7.82□□□□□ -1.16
SF3A3-204ENST00000462258 SLC5A7Q9GZV3 580 aa7.82□□□□□ -1.16
SF3A3-204ENST00000462258 CCL28Q9NRJ3 127 aa7.82□□□□□ -1.16
SF3A3-204ENST00000462258 EHFQ9NZC4 300 aa7.82□□□□□ -1.16
SF3A3-204ENST00000462258 ANAPC10Q9UM13 185 aa7.82□□□□□ -1.16
SF3A3-204ENST00000462258 LSM4Q9Y4Z0 139 aaKnown RBP7.82□□□□□ -1.16
SF3A3-204ENST00000462258 SORL1Q92673 2214 aa7.82□□□□□ -1.16
SF3A3-204ENST00000462258 RBMXL2O75526 392 aaKnown RBP7.81□□□□□ -1.16
SF3A3-204ENST00000462258 OR2A4O95047 310 aa7.81□□□□□ -1.16
SF3A3-204ENST00000462258 EIF4EP06730 217 aaKnown RBP7.81□□□□□ -1.16
SF3A3-204ENST00000462258 SMIM18P0DKX4 95 aa7.81□□□□□ -1.16
SF3A3-204ENST00000462258 RPL27AP46776 148 aaKnown RBP7.81□□□□□ -1.16
SF3A3-204ENST00000462258 BRWD1-AS2P59051 145 aa7.81□□□□□ -1.16
SF3A3-204ENST00000462258 VBP1P61758 197 aa7.81□□□□□ -1.16
SF3A3-204ENST00000462258 ZNF45Q02386 682 aa7.81□□□□□ -1.16
SF3A3-204ENST00000462258 VAX1Q5SQQ9 334 aa7.81□□□□□ -1.16
SF3A3-204ENST00000462258 ZNF818PQ6ZRF7 136 aa7.81□□□□□ -1.16
SF3A3-204ENST00000462258 SSX9Q7RTT3 188 aa7.81□□□□□ -1.16
SF3A3-204ENST00000462258 SPAG16Q8N0X2 631 aa7.81□□□□□ -1.16
SF3A3-204ENST00000462258 PUSL1Q8N0Z8 303 aaKnown RBP7.81□□□□□ -1.16
SF3A3-204ENST00000462258 ZBTB34Q8NCN2 500 aa7.81□□□□□ -1.16
SF3A3-204ENST00000462258 TMEM167AQ8TBQ9 72 aa7.81□□□□□ -1.16
SF3A3-204ENST00000462258 USMG5Q96IX5 58 aa7.81□□□□□ -1.16
SF3A3-204ENST00000462258 OR2A7Q96R45 310 aa7.81□□□□□ -1.16
SF3A3-204ENST00000462258 OR4C12Q96R67 309 aa7.81□□□□□ -1.16
SF3A3-204ENST00000462258 RSRP1Q9BUV0 290 aa7.81□□□□□ -1.16
SF3A3-204ENST00000462258 FAM223BA6NKX1 122 aa7.8□□□□□ -1.16
SF3A3-204ENST00000462258 TEX22C9J3V5 150 aa7.8□□□□□ -1.16
SF3A3-204ENST00000462258 SULT1C2O00338 296 aa7.8□□□□□ -1.16
SF3A3-204ENST00000462258 RBFOX2O43251 390 aaKnown RBP eCLIP7.8□□□□□ -1.16
SF3A3-204ENST00000462258 HRASP01112 189 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms