RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 EIF4EBP1Q13541 118 aaPredicted RBP11.46□□□□□ -0.57
PTPRE-204ENST00000455661 WDR73Q6P4I2 378 aa11.46□□□□□ -0.57
PTPRE-204ENST00000455661 TUSC5Q8IXB3 177 aa11.46□□□□□ -0.57
PTPRE-204ENST00000455661 MMD2Q8IY49 270 aa11.46□□□□□ -0.57
PTPRE-204ENST00000455661 OR2Y1Q8NGV0 311 aa11.46□□□□□ -0.57
PTPRE-204ENST00000455661 TBL2Q9Y4P3 447 aaKnown RBP11.46□□□□□ -0.57
PTPRE-204ENST00000455661 LY96Q9Y6Y9 160 aa11.46□□□□□ -0.57
PTPRE-204ENST00000455661 YLPM1P49750 1951 aaKnown RBP11.46□□□□□ -0.57
PTPRE-204ENST00000455661 GDF9O60383 454 aa11.46□□□□□ -0.58
PTPRE-204ENST00000455661 MT-ND6P03923 174 aa11.46□□□□□ -0.58
PTPRE-204ENST00000455661 TDGF1P13385 188 aa11.46□□□□□ -0.58
PTPRE-204ENST00000455661 HNRNPA3P51991 378 aaKnown RBP11.46□□□□□ -0.58
PTPRE-204ENST00000455661 FOXG1P55316 489 aaPredicted RBP11.46□□□□□ -0.58
PTPRE-204ENST00000455661 RPL31P62899 125 aaKnown RBP11.46□□□□□ -0.58
PTPRE-204ENST00000455661 ANKRD39Q53RE8 183 aa11.46□□□□□ -0.58
PTPRE-204ENST00000455661 DCAF12Q5T6F0 453 aa11.46□□□□□ -0.58
PTPRE-204ENST00000455661 WDR31Q8NA23 367 aa11.46□□□□□ -0.58
PTPRE-204ENST00000455661 SCCPDHQ8NBX0 429 aa11.46□□□□□ -0.58
PTPRE-204ENST00000455661 OR52L2PQ8NGH6 319 aa11.46□□□□□ -0.58
PTPRE-204ENST00000455661 GNB4Q9HAV0 340 aa11.46□□□□□ -0.58
PTPRE-204ENST00000455661 NRN1Q9NPD7 142 aa11.46□□□□□ -0.58
PTPRE-204ENST00000455661 SPTBN5Q9NRC6 3674 aaKnown RBP11.45□□□□□ -0.58
PTPRE-204ENST00000455661 C9JCJ5 164 aa11.45□□□□□ -0.58
PTPRE-204ENST00000455661 K7EN84 100 aa11.45□□□□□ -0.58
PTPRE-204ENST00000455661 ZNF253O75346 499 aa11.45□□□□□ -0.58
PTPRE-204ENST00000455661 OR5G3P0C626 314 aa11.45□□□□□ -0.58
PTPRE-204ENST00000455661 CTRLP40313 264 aa11.45□□□□□ -0.58
PTPRE-204ENST00000455661 FOLR3P41439 243 aa11.45□□□□□ -0.58
PTPRE-204ENST00000455661 AMTP48728 403 aa11.45□□□□□ -0.58
PTPRE-204ENST00000455661 GFRA1P56159 465 aa11.45□□□□□ -0.58
PTPRE-204ENST00000455661 ZNF146Q15072 292 aa11.45□□□□□ -0.58
PTPRE-204ENST00000455661 IGFBP7Q16270 282 aa11.45□□□□□ -0.58
PTPRE-204ENST00000455661 ZNF718Q3SXZ3 478 aa11.45□□□□□ -0.58
PTPRE-204ENST00000455661 COX19Q49B96 90 aa11.45□□□□□ -0.58
PTPRE-204ENST00000455661 OR10J3Q5JRS4 329 aa11.45□□□□□ -0.58
PTPRE-204ENST00000455661 Q6ZN92 141 aa11.45□□□□□ -0.58
PTPRE-204ENST00000455661 KLHDC1Q8N7A1 406 aa11.45□□□□□ -0.58
PTPRE-204ENST00000455661 C5orf30Q96GV9 206 aa11.45□□□□□ -0.58
PTPRE-204ENST00000455661 NAT8BQ9UHF3 227 aa11.45□□□□□ -0.58
PTPRE-204ENST00000455661 NCKAP5O14513 1909 aa11.45□□□□□ -0.58
PTPRE-204ENST00000455661 TRGV10A0A0A0MS01 117 aa11.44□□□□□ -0.58
PTPRE-204ENST00000455661 OOEPA6NGQ2 149 aa11.44□□□□□ -0.58
PTPRE-204ENST00000455661 PTTG1IPP53801 180 aa11.44□□□□□ -0.58
PTPRE-204ENST00000455661 BRWD1-AS2P59051 145 aa11.44□□□□□ -0.58
PTPRE-204ENST00000455661 ERVK11-1P61568 191 aa11.44□□□□□ -0.58
PTPRE-204ENST00000455661 PSG7Q13046 419 aa11.44□□□□□ -0.58
PTPRE-204ENST00000455661 SPATA46Q5T0L3 261 aa11.44□□□□□ -0.58
PTPRE-204ENST00000455661 TREML4Q6UXN2 200 aa11.44□□□□□ -0.58
PTPRE-204ENST00000455661 ZNF784Q8NCA9 323 aaPredicted RBP11.44□□□□□ -0.58
PTPRE-204ENST00000455661 ORAOV1Q8WV07 137 aa11.44□□□□□ -0.58
PTPRE-204ENST00000455661 SFXN3Q9BWM7 321 aa11.44□□□□□ -0.58
PTPRE-204ENST00000455661 LAMTOR2Q9Y2Q5 125 aa11.44□□□□□ -0.58
PTPRE-204ENST00000455661 YTHDF2Q9Y5A9 579 aaKnown RBP11.44□□□□□ -0.58
PTPRE-204ENST00000455661 SAA2-SAA4A0A096LPE2 208 aa11.44□□□□□ -0.58
PTPRE-204ENST00000455661 LY6G6EA0A0G2JKS1 128 aa11.44□□□□□ -0.58
PTPRE-204ENST00000455661 C12orf77C9JDV5 145 aa11.44□□□□□ -0.58
PTPRE-204ENST00000455661 GCHFRP30047 84 aa11.44□□□□□ -0.58
PTPRE-204ENST00000455661 GNG10P50151 68 aa11.44□□□□□ -0.58
PTPRE-204ENST00000455661 TRA2AQ13595 282 aaKnown RBP eCLIP11.44□□□□□ -0.58
PTPRE-204ENST00000455661 MIC13Q5XKP0 118 aa11.44□□□□□ -0.58
PTPRE-204ENST00000455661 OR8I2Q8N0Y5 310 aa11.44□□□□□ -0.58
PTPRE-204ENST00000455661 Q8N976 141 aa11.44□□□□□ -0.58
PTPRE-204ENST00000455661 APH1AQ96BI3 265 aa11.44□□□□□ -0.58
PTPRE-204ENST00000455661 EAF1Q96JC9 268 aaPredicted RBP11.44□□□□□ -0.58
PTPRE-204ENST00000455661 KCNS1Q96KK3 526 aa11.44□□□□□ -0.58
PTPRE-204ENST00000455661 HSD17B10Q99714 261 aaKnown RBP11.44□□□□□ -0.58
PTPRE-204ENST00000455661 U3KQA8 63 aa11.44□□□□□ -0.58
PTPRE-204ENST00000455661 FAM166BA8MTA8 275 aa11.43□□□□□ -0.58
PTPRE-204ENST00000455661 HAND1O96004 215 aa11.43□□□□□ -0.58
PTPRE-204ENST00000455661 IGHEP01854 428 aa11.43□□□□□ -0.58
PTPRE-204ENST00000455661 ZXDAP98168 799 aa11.43□□□□□ -0.58
PTPRE-204ENST00000455661 STPG4Q8N801 248 aa11.43□□□□□ -0.58
PTPRE-204ENST00000455661 MGST2Q99735 147 aa11.43□□□□□ -0.58
PTPRE-204ENST00000455661 GGTLC1Q9BX51 225 aa11.43□□□□□ -0.58
PTPRE-204ENST00000455661 DEPPQ9NTK1 212 aa11.43□□□□□ -0.58
PTPRE-204ENST00000455661 MYO15AQ9UKN7 3530 aa11.43□□□□□ -0.58
PTPRE-204ENST00000455661 SDK1Q7Z5N4 2213 aa11.43□□□□□ -0.58
PTPRE-204ENST00000455661 DIDO1Q9BTC0 2240 aaKnown RBP11.43□□□□□ -0.58
PTPRE-204ENST00000455661 RRHO14718 337 aa11.43□□□□□ -0.58
PTPRE-204ENST00000455661 CDIPTO14735 213 aa11.43□□□□□ -0.58
PTPRE-204ENST00000455661 HYPMO75409 117 aa11.43□□□□□ -0.58
PTPRE-204ENST00000455661 HBZP02008 142 aa11.43□□□□□ -0.58
PTPRE-204ENST00000455661 IGLC2P0DOY2 106 aa11.43□□□□□ -0.58
PTPRE-204ENST00000455661 IGLC3P0DOY3 106 aa11.43□□□□□ -0.58
PTPRE-204ENST00000455661 PMCHP20382 165 aa11.43□□□□□ -0.58
PTPRE-204ENST00000455661 LEMD1Q68G75 181 aa11.43□□□□□ -0.58
PTPRE-204ENST00000455661 TMPRSS7Q7RTY8 843 aa11.43□□□□□ -0.58
PTPRE-204ENST00000455661 OR2M7Q8NG81 312 aa11.43□□□□□ -0.58
PTPRE-204ENST00000455661 C11orf52Q96A22 123 aa11.43□□□□□ -0.58
PTPRE-204ENST00000455661 HEYLQ9NQ87 328 aaPredicted RBP11.43□□□□□ -0.58
PTPRE-204ENST00000455661 ESPL1Q14674 2120 aa11.42□□□□□ -0.58
PTPRE-204ENST00000455661 RHOBP62745 196 aa11.42□□□□□ -0.58
PTPRE-204ENST00000455661 WDR86Q86TI4 376 aa11.42□□□□□ -0.58
PTPRE-204ENST00000455661 ST6GALNAC3Q8NDV1 305 aa11.42□□□□□ -0.58
PTPRE-204ENST00000455661 OR4A16Q8NH70 328 aa11.42□□□□□ -0.58
PTPRE-204ENST00000455661 MS4A5Q9H3V2 200 aa11.42□□□□□ -0.58
PTPRE-204ENST00000455661 MRPS17Q9Y2R5 130 aaKnown RBP11.42□□□□□ -0.58
PTPRE-204ENST00000455661 RNF114Q9Y508 228 aa11.42□□□□□ -0.58
PTPRE-204ENST00000455661 V9GYV3 84 aa11.42□□□□□ -0.58
PTPRE-204ENST00000455661 A0A1W2PS18 150 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms