RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 FAM214BQ7L5A3 538 aa8.71□□□□□ -1.02
CLSTN1-203ENST00000435891 ERASQ7Z444 233 aa8.71□□□□□ -1.02
CLSTN1-203ENST00000435891 ZDHHC16Q969W1 377 aa8.71□□□□□ -1.02
CLSTN1-203ENST00000435891 PLPPR2Q96GM1 343 aa8.71□□□□□ -1.02
CLSTN1-203ENST00000435891 WDR61Q9GZS3 305 aaKnown RBP8.71□□□□□ -1.02
CLSTN1-203ENST00000435891 CACNA1GO43497 2377 aa8.71□□□□□ -1.02
CLSTN1-203ENST00000435891 TRAV1-1A0A0B4J248 108 aa8.71□□□□□ -1.02
CLSTN1-203ENST00000435891 DEFB108AA8MXU0 73 aa8.71□□□□□ -1.02
CLSTN1-203ENST00000435891 CLDN1O95832 211 aa8.71□□□□□ -1.02
CLSTN1-203ENST00000435891 HBE1P02100 147 aa8.71□□□□□ -1.02
CLSTN1-203ENST00000435891 DEFA4P12838 97 aa8.71□□□□□ -1.02
CLSTN1-203ENST00000435891 OR10J1P30954 320 aa8.71□□□□□ -1.02
CLSTN1-203ENST00000435891 FABP6P51161 128 aa8.71□□□□□ -1.02
CLSTN1-203ENST00000435891 TGFBR3Q03167 851 aa8.71□□□□□ -1.02
CLSTN1-203ENST00000435891 WDR31Q8NA23 367 aa8.71□□□□□ -1.02
CLSTN1-203ENST00000435891 TMEM178AQ8NBL3 297 aa8.71□□□□□ -1.02
CLSTN1-203ENST00000435891 ALKBH7Q9BT30 221 aaPredicted RBP8.71□□□□□ -1.02
CLSTN1-203ENST00000435891 VAMP8Q9BV40 100 aa8.71□□□□□ -1.02
CLSTN1-203ENST00000435891 POLR3KQ9Y2Y1 108 aaPredicted RBP8.71□□□□□ -1.02
CLSTN1-203ENST00000435891 BCL2P10415 239 aa8.7□□□□□ -1.02
CLSTN1-203ENST00000435891 KIR2DL2P43627 348 aaPredicted RBP8.7□□□□□ -1.02
CLSTN1-203ENST00000435891 VAMP3Q15836 100 aa8.7□□□□□ -1.02
CLSTN1-203ENST00000435891 C1orf194Q5T5A4 169 aa8.7□□□□□ -1.02
CLSTN1-203ENST00000435891 Q6ZT83 130 aa8.7□□□□□ -1.02
CLSTN1-203ENST00000435891 Q6ZVH6 145 aa8.7□□□□□ -1.02
CLSTN1-203ENST00000435891 RPP25LQ8N5L8 163 aaKnown RBP8.7□□□□□ -1.02
CLSTN1-203ENST00000435891 C9orf106Q8NAJ2 232 aa8.7□□□□□ -1.02
CLSTN1-203ENST00000435891 OTOGLQ3ZCN5 2332 aa8.7□□□□□ -1.02
CLSTN1-203ENST00000435891 ODAMA1E959 279 aa8.7□□□□□ -1.02
CLSTN1-203ENST00000435891 GABRA2P47869 451 aa8.7□□□□□ -1.02
CLSTN1-203ENST00000435891 EIF4EBP1Q13541 118 aaPredicted RBP8.7□□□□□ -1.02
CLSTN1-203ENST00000435891 DPPA3Q6W0C5 159 aa8.7□□□□□ -1.02
CLSTN1-203ENST00000435891 ZNF645Q8N7E2 425 aa8.7□□□□□ -1.02
CLSTN1-203ENST00000435891 VN1R17PQ8TDU5 208 aa8.7□□□□□ -1.02
CLSTN1-203ENST00000435891 GALMQ96C23 342 aa8.7□□□□□ -1.02
CLSTN1-203ENST00000435891 H7BYZ3 331 aa8.7□□□□□ -1.02
CLSTN1-203ENST00000435891 P0C879 139 aa8.7□□□□□ -1.02
CLSTN1-203ENST00000435891 SLC38A11Q08AI6 406 aa8.7□□□□□ -1.02
CLSTN1-203ENST00000435891 MMDQ15546 238 aa8.7□□□□□ -1.02
CLSTN1-203ENST00000435891 ATP6V1FQ16864 119 aa8.7□□□□□ -1.02
CLSTN1-203ENST00000435891 C1orf185Q5T7R7 199 aa8.7□□□□□ -1.02
CLSTN1-203ENST00000435891 WDR82Q6UXN9 313 aa8.7□□□□□ -1.02
CLSTN1-203ENST00000435891 OR13A1Q8NGR1 328 aa8.7□□□□□ -1.02
CLSTN1-203ENST00000435891 TAF15Q92804 592 aaKnown RBP eCLIP8.7□□□□□ -1.02
CLSTN1-203ENST00000435891 PCGF1Q9BSM1 259 aa8.7□□□□□ -1.02
CLSTN1-203ENST00000435891 DMXL2Q8TDJ6 3036 aa8.7□□□□□ -1.02
CLSTN1-203ENST00000435891 ATMQ13315 3056 aa8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 CEP250Q9BV73 2442 aa8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 A0A087WWC5 75 aa8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 TMEM30CPA0ZSE6 113 aa8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 LINC00473A8K010 186 aa8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 CEBPZOSA8MTT3 80 aa8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 J3QW42 95 aa8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 ITGB1BP1O14713 200 aa8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 ZG16O60844 167 aa8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 IGKV3-15P01624 115 aa8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 OPN1MWP04001 364 aa8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 OPN1MW2P0DN77 364 aa8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 OPN1MW3P0DN78 364 aa8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 GUSBP1Q15486 140 aa8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 LTC4SQ16873 150 aa8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 ACSM6Q6P461 480 aa8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 TMEM14EPQ6UXP3 125 aa8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 MBD3L1Q8WWY6 194 aa8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 VAX2Q9UIW0 290 aa8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 ZFP30Q9Y2G7 519 aa8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 CECR9P0C854 216 aa8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 HBG1P69891 147 aa8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 HBG2P69892 147 aa8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 TMEM41BQ5BJD5 291 aa8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 ACP7Q6ZNF0 438 aa8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 PSMG3Q9BT73 122 aaPredicted RBP8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 KCNIP1Q9NZI2 227 aa8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 A0A0U1RQK1 487 aa8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 MAP1LC3B2A6NCE7 125 aa8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 M0QZ24 198 aa8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 OR5G3P0C626 314 aa8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 CCKARP32238 428 aa8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 INO80CQ6PI98 192 aaPredicted RBP8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 SLC35E3Q7Z769 313 aa8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 RPUSD4Q96CM3 377 aaKnown RBP8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 MAP1LC3BQ9GZQ8 125 aa8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 CISD1Q9NZ45 108 aaKnown RBP8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 HSPB7Q9UBY9 170 aa8.69□□□□□ -1.02
CLSTN1-203ENST00000435891 TRIP6Q15654 476 aaKnown RBP8.68□□□□□ -1.02
CLSTN1-203ENST00000435891 GATAD1Q8WUU5 269 aa8.68□□□□□ -1.02
CLSTN1-203ENST00000435891 SAMD10Q9BYL1 202 aa8.68□□□□□ -1.02
CLSTN1-203ENST00000435891 ADGRG4Q8IZF6 3080 aa8.68□□□□□ -1.02
CLSTN1-203ENST00000435891 A0A1B0GUS0 222 aa8.68□□□□□ -1.02
CLSTN1-203ENST00000435891 PMS2P5A8MQ11 134 aa8.68□□□□□ -1.02
CLSTN1-203ENST00000435891 IGHV3-13P01766 116 aa8.68□□□□□ -1.02
CLSTN1-203ENST00000435891 IGHV3-7P01780 117 aa8.68□□□□□ -1.02
CLSTN1-203ENST00000435891 MSMPQ1L6U9 139 aa8.68□□□□□ -1.02
CLSTN1-203ENST00000435891 RNASEH2CQ8TDP1 164 aaKnown RBP8.68□□□□□ -1.02
CLSTN1-203ENST00000435891 LOXL4Q96JB6 756 aa8.68□□□□□ -1.02
CLSTN1-203ENST00000435891 BTF3L4Q96K17 158 aa8.68□□□□□ -1.02
CLSTN1-203ENST00000435891 SLC25A22Q9H936 323 aa8.68□□□□□ -1.02
CLSTN1-203ENST00000435891 LRRC30A6NM36 301 aa8.68□□□□□ -1.02
CLSTN1-203ENST00000435891 A8MXE2 369 aa8.68□□□□□ -1.02
CLSTN1-203ENST00000435891 CCL25O15444 150 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms