RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 DLX4Q92988 240 aaPredicted RBP13.59□□□□□ -0.23
NUP50-208ENST00000430547 RHOVQ96L33 236 aa13.59□□□□□ -0.23
NUP50-208ENST00000430547 PRR25Q96S07 402 aa13.59□□□□□ -0.23
NUP50-208ENST00000430547 ZNF256Q9Y2P7 627 aaPredicted RBP13.59□□□□□ -0.23
NUP50-208ENST00000430547 FCER2P06734 321 aa13.58□□□□□ -0.24
NUP50-208ENST00000430547 SAA1P0DJI8 122 aaPredicted RBP13.58□□□□□ -0.24
NUP50-208ENST00000430547 APELAP0DMC3 54 aa13.58□□□□□ -0.24
NUP50-208ENST00000430547 AADACP22760 399 aa13.58□□□□□ -0.24
NUP50-208ENST00000430547 RPS19P39019 145 aaKnown RBP13.58□□□□□ -0.24
NUP50-208ENST00000430547 ZNF66Q6ZN08 573 aa13.58□□□□□ -0.24
NUP50-208ENST00000430547 MMD2Q8IY49 270 aa13.58□□□□□ -0.24
NUP50-208ENST00000430547 SAMD12Q8N8I0 201 aa13.58□□□□□ -0.24
NUP50-208ENST00000430547 OR13F1Q8NGS4 319 aa13.58□□□□□ -0.24
NUP50-208ENST00000430547 SRSF12Q8WXF0 261 aaKnown RBP13.58□□□□□ -0.24
NUP50-208ENST00000430547 TAS2R8Q9NYW2 309 aa13.58□□□□□ -0.24
NUP50-208ENST00000430547 MSGN1A6NI15 193 aa13.57□□□□□ -0.24
NUP50-208ENST00000430547 XRCC3O43542 346 aa13.57□□□□□ -0.24
NUP50-208ENST00000430547 IGLV2-14P01704 120 aa13.57□□□□□ -0.24
NUP50-208ENST00000430547 PTHLHP12272 177 aa13.57□□□□□ -0.24
NUP50-208ENST00000430547 RPL30P62888 115 aaKnown RBP13.57□□□□□ -0.24
NUP50-208ENST00000430547 TMEM69Q5SWH9 247 aa13.57□□□□□ -0.24
NUP50-208ENST00000430547 VSTM2AQ8TAG5 236 aa13.57□□□□□ -0.24
NUP50-208ENST00000430547 B9D2Q9BPU9 175 aa13.57□□□□□ -0.24
NUP50-208ENST00000430547 TINAGL1Q9GZM7 467 aaPredicted RBP13.57□□□□□ -0.24
NUP50-208ENST00000430547 ZNF430Q9H8G1 570 aaPredicted RBP13.57□□□□□ -0.24
NUP50-208ENST00000430547 RANGRFQ9HD47 186 aaPredicted RBP13.57□□□□□ -0.24
NUP50-208ENST00000430547 SORL1Q92673 2214 aa13.57□□□□□ -0.24
NUP50-208ENST00000430547 MEIS3P1A6NDR6 274 aa13.56□□□□□ -0.24
NUP50-208ENST00000430547 PPYP01298 95 aa13.56□□□□□ -0.24
NUP50-208ENST00000430547 ZP3P21754 424 aa13.56□□□□□ -0.24
NUP50-208ENST00000430547 KIR2DS2P43631 304 aa13.56□□□□□ -0.24
NUP50-208ENST00000430547 FXYD4P59646 89 aa13.56□□□□□ -0.24
NUP50-208ENST00000430547 MFSD4AQ8N468 514 aa13.56□□□□□ -0.24
NUP50-208ENST00000430547 OR5AP2Q8NGF4 316 aa13.56□□□□□ -0.24
NUP50-208ENST00000430547 SPIN2AQ99865 258 aa13.56□□□□□ -0.24
NUP50-208ENST00000430547 SPIN2BQ9BPZ2 258 aa13.56□□□□□ -0.24
NUP50-208ENST00000430547 ANKRD34BA5PLL1 514 aa13.55□□□□□ -0.24
NUP50-208ENST00000430547 TNFSF12O43508 249 aa13.55□□□□□ -0.24
NUP50-208ENST00000430547 BRI3O95415 125 aa13.55□□□□□ -0.24
NUP50-208ENST00000430547 OR9G9P0C7N8 305 aa13.55□□□□□ -0.24
NUP50-208ENST00000430547 HERV-K104P61576 105 aa13.55□□□□□ -0.24
NUP50-208ENST00000430547 MSMO1Q15800 293 aa13.55□□□□□ -0.24
NUP50-208ENST00000430547 MRGPRG-AS1Q2M3A8 158 aa13.55□□□□□ -0.24
NUP50-208ENST00000430547 ACSM6Q6P461 480 aa13.55□□□□□ -0.24
NUP50-208ENST00000430547 VKORC1L1Q8N0U8 176 aa13.55□□□□□ -0.24
NUP50-208ENST00000430547 ZBTB34Q8NCN2 500 aa13.55□□□□□ -0.24
NUP50-208ENST00000430547 OR6Q1Q8NGQ2 317 aa13.55□□□□□ -0.24
NUP50-208ENST00000430547 SNAPC3Q92966 411 aa13.55□□□□□ -0.24
NUP50-208ENST00000430547 SLC25A46Q96AG3 418 aa13.55□□□□□ -0.24
NUP50-208ENST00000430547 KCTD12Q96CX2 325 aaKnown RBP13.55□□□□□ -0.24
NUP50-208ENST00000430547 USMG5Q96IX5 58 aa13.55□□□□□ -0.24
NUP50-208ENST00000430547 OR4C12Q96R67 309 aa13.55□□□□□ -0.24
NUP50-208ENST00000430547 ELOVL1Q9BW60 279 aa13.55□□□□□ -0.24
NUP50-208ENST00000430547 FUNDC2Q9BWH2 189 aa13.55□□□□□ -0.24
NUP50-208ENST00000430547 SLC5A7Q9GZV3 580 aa13.55□□□□□ -0.24
NUP50-208ENST00000430547 CCL28Q9NRJ3 127 aa13.55□□□□□ -0.24
NUP50-208ENST00000430547 COL7A1Q02388 2944 aa13.55□□□□□ -0.24
NUP50-208ENST00000430547 KBTBD11O94819 623 aa13.54□□□□□ -0.24
NUP50-208ENST00000430547 OR2A4O95047 310 aa13.54□□□□□ -0.24
NUP50-208ENST00000430547 HRASP01112 189 aa13.54□□□□□ -0.24
NUP50-208ENST00000430547 TAS2R20P59543 309 aa13.54□□□□□ -0.24
NUP50-208ENST00000430547 DEFA5Q01523 94 aa13.54□□□□□ -0.24
NUP50-208ENST00000430547 CATR1Q13166 79 aa13.54□□□□□ -0.24
NUP50-208ENST00000430547 TMEM17Q86X19 198 aa13.54□□□□□ -0.24
NUP50-208ENST00000430547 ADAD2Q8NCV1 583 aaKnown RBP13.54□□□□□ -0.24
NUP50-208ENST00000430547 BORCS5Q969J3 196 aa13.54□□□□□ -0.24
NUP50-208ENST00000430547 OR2A7Q96R45 310 aa13.54□□□□□ -0.24
NUP50-208ENST00000430547 AIFM2Q9BRQ8 373 aa13.54□□□□□ -0.24
NUP50-208ENST00000430547 EHFQ9NZC4 300 aa13.54□□□□□ -0.24
NUP50-208ENST00000430547 NCS1P62166 190 aa13.53□□□□□ -0.24
NUP50-208ENST00000430547 EIF4EBP1Q13541 118 aaPredicted RBP13.53□□□□□ -0.24
NUP50-208ENST00000430547 VAX1Q5SQQ9 334 aa13.53□□□□□ -0.24
NUP50-208ENST00000430547 SLC25A42Q86VD7 318 aa13.53□□□□□ -0.24
NUP50-208ENST00000430547 GPHA2Q96T91 129 aa13.53□□□□□ -0.24
NUP50-208ENST00000430547 RSRP1Q9BUV0 290 aa13.53□□□□□ -0.24
NUP50-208ENST00000430547 SMIM31A0A1B0GVY4 71 aa13.52□□□□□ -0.25
NUP50-208ENST00000430547 DPPA5A6NC42 116 aa13.52□□□□□ -0.25
NUP50-208ENST00000430547 FAM223BA6NKX1 122 aa13.52□□□□□ -0.25
NUP50-208ENST00000430547 TRIM64CA6NLI5 447 aa13.52□□□□□ -0.25
NUP50-208ENST00000430547 PRSS3P35030 304 aa13.52□□□□□ -0.25
NUP50-208ENST00000430547 TAS2R46P59540 309 aa13.52□□□□□ -0.25
NUP50-208ENST00000430547 VBP1P61758 197 aa13.52□□□□□ -0.25
NUP50-208ENST00000430547 C10orf55Q5SWW7 151 aa13.52□□□□□ -0.25
NUP50-208ENST00000430547 C11orf87Q6NUJ2 197 aa13.52□□□□□ -0.25
NUP50-208ENST00000430547 SSX9Q7RTT3 188 aa13.52□□□□□ -0.25
NUP50-208ENST00000430547 FAM223AQ8IWN6 122 aa13.52□□□□□ -0.25
NUP50-208ENST00000430547 SPAG16Q8N0X2 631 aa13.52□□□□□ -0.25
NUP50-208ENST00000430547 TMEM167AQ8TBQ9 72 aa13.52□□□□□ -0.25
NUP50-208ENST00000430547 GIMAP1Q8WWP7 306 aa13.52□□□□□ -0.25
NUP50-208ENST00000430547 COMMD3Q9UBI1 195 aa13.52□□□□□ -0.25
NUP50-208ENST00000430547 PEF1Q9UBV8 284 aaKnown RBP13.52□□□□□ -0.25
NUP50-208ENST00000430547 LSM4Q9Y4Z0 139 aaKnown RBP13.52□□□□□ -0.25
NUP50-208ENST00000430547 MAS1LP35410 378 aa13.51□□□□□ -0.25
NUP50-208ENST00000430547 RPL27AP46776 148 aaKnown RBP13.51□□□□□ -0.25
NUP50-208ENST00000430547 DYRK1AQ13627 763 aa13.51□□□□□ -0.25
NUP50-208ENST00000430547 ZNF343Q6P1L6 599 aa13.51□□□□□ -0.25
NUP50-208ENST00000430547 OR5H2Q8NGV7 314 aa13.51□□□□□ -0.25
NUP50-208ENST00000430547 FYTTD1Q96QD9 318 aaKnown RBP13.51□□□□□ -0.25
NUP50-208ENST00000430547 SMAD5-AS1Q9Y6J3 95 aa13.51□□□□□ -0.25
NUP50-208ENST00000430547 SULT1C2O00338 296 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms