RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 SAA1P0DJI8 122 aaPredicted RBP12.67□□□□□ -0.38
UPF3AP3-201ENST00000420996 IRF3Q14653 427 aa12.67□□□□□ -0.38
UPF3AP3-201ENST00000420996 CDK10Q15131 360 aa12.67□□□□□ -0.38
UPF3AP3-201ENST00000420996 TRAM1Q15629 374 aa12.67□□□□□ -0.38
UPF3AP3-201ENST00000420996 C15orf32Q32M92 178 aa12.67□□□□□ -0.38
UPF3AP3-201ENST00000420996 SLC25A42Q86VD7 318 aa12.67□□□□□ -0.38
UPF3AP3-201ENST00000420996 MMD2Q8IY49 270 aa12.67□□□□□ -0.38
UPF3AP3-201ENST00000420996 CENPOQ9BU64 300 aa12.67□□□□□ -0.38
UPF3AP3-201ENST00000420996 V9GY05 133 aa12.67□□□□□ -0.38
UPF3AP3-201ENST00000420996 ERICH4A6NGS2 130 aa12.66□□□□□ -0.38
UPF3AP3-201ENST00000420996 PPP5D1E7EU14 171 aa12.66□□□□□ -0.38
UPF3AP3-201ENST00000420996 OR2J3O76001 311 aa12.66□□□□□ -0.38
UPF3AP3-201ENST00000420996 EDN2P20800 178 aa12.66□□□□□ -0.38
UPF3AP3-201ENST00000420996 PSMA1P25786 263 aaKnown RBP12.66□□□□□ -0.38
UPF3AP3-201ENST00000420996 PSMD7P51665 324 aa12.66□□□□□ -0.38
UPF3AP3-201ENST00000420996 RPS25P62851 125 aaKnown RBP12.66□□□□□ -0.38
UPF3AP3-201ENST00000420996 PLA2G7Q13093 441 aa12.66□□□□□ -0.38
UPF3AP3-201ENST00000420996 SLC16A13Q7RTY0 426 aa12.66□□□□□ -0.38
UPF3AP3-201ENST00000420996 GPHB5Q86YW7 130 aa12.66□□□□□ -0.38
UPF3AP3-201ENST00000420996 H1FOOQ8IZA3 346 aaPredicted RBP12.66□□□□□ -0.38
UPF3AP3-201ENST00000420996 MAFIPQ8WZ33 124 aa12.66□□□□□ -0.38
UPF3AP3-201ENST00000420996 LINC00476Q8WZB0 136 aa12.66□□□□□ -0.38
UPF3AP3-201ENST00000420996 WDR89Q96FK6 387 aaPredicted RBP12.66□□□□□ -0.38
UPF3AP3-201ENST00000420996 SCN3BQ9NY72 215 aa12.66□□□□□ -0.38
UPF3AP3-201ENST00000420996 ZNF257Q9Y2Q1 563 aa12.66□□□□□ -0.38
UPF3AP3-201ENST00000420996 MFNGO00587 321 aa12.65□□□□□ -0.38
UPF3AP3-201ENST00000420996 OR2C1O95371 312 aa12.65□□□□□ -0.38
UPF3AP3-201ENST00000420996 HLA-AP01891 365 aaKnown RBP12.65□□□□□ -0.38
UPF3AP3-201ENST00000420996 CBLN1P23435 193 aa12.65□□□□□ -0.38
UPF3AP3-201ENST00000420996 GADD45AP24522 165 aa12.65□□□□□ -0.38
UPF3AP3-201ENST00000420996 CALRP27797 417 aaKnown RBP12.65□□□□□ -0.38
UPF3AP3-201ENST00000420996 RCN1Q15293 331 aa12.65□□□□□ -0.38
UPF3AP3-201ENST00000420996 C10orf55Q5SWW7 151 aa12.65□□□□□ -0.38
UPF3AP3-201ENST00000420996 OGFRL1Q5TC84 451 aaPredicted RBP12.65□□□□□ -0.38
UPF3AP3-201ENST00000420996 Q6ZS49 121 aa12.65□□□□□ -0.38
UPF3AP3-201ENST00000420996 OR10R2Q8NGX6 335 aa12.65□□□□□ -0.38
UPF3AP3-201ENST00000420996 OVOL2Q9BRP0 275 aa12.65□□□□□ -0.38
UPF3AP3-201ENST00000420996 ALMS1Q8TCU4 4167 aa12.64□□□□□ -0.39
UPF3AP3-201ENST00000420996 HSMCR30P0CW71 290 aa12.64□□□□□ -0.39
UPF3AP3-201ENST00000420996 GNB3P16520 340 aa12.64□□□□□ -0.39
UPF3AP3-201ENST00000420996 HES5Q5TA89 166 aa12.64□□□□□ -0.39
UPF3AP3-201ENST00000420996 DCUN1D5Q9BTE7 237 aa12.64□□□□□ -0.39
UPF3AP3-201ENST00000420996 FBXL7Q9UJT9 491 aa12.64□□□□□ -0.39
UPF3AP3-201ENST00000420996 HMX3A6NHT5 357 aa12.63□□□□□ -0.39
UPF3AP3-201ENST00000420996 NPIPB5A8MRT5 1133 aa12.63□□□□□ -0.39
UPF3AP3-201ENST00000420996 TEX22C9J3V5 150 aa12.63□□□□□ -0.39
UPF3AP3-201ENST00000420996 RAB27BO00194 218 aa12.63□□□□□ -0.39
UPF3AP3-201ENST00000420996 FCGR3BO75015 233 aa12.63□□□□□ -0.39
UPF3AP3-201ENST00000420996 HIST1H1DP16402 221 aaKnown RBP12.63□□□□□ -0.39
UPF3AP3-201ENST00000420996 MAP2K4P45985 399 aa12.63□□□□□ -0.39
UPF3AP3-201ENST00000420996 ZNF57Q68EA5 555 aaPredicted RBP12.63□□□□□ -0.39
UPF3AP3-201ENST00000420996 TMEM61Q8N0U2 210 aa12.63□□□□□ -0.39
UPF3AP3-201ENST00000420996 OR52B4Q8NGK2 314 aa12.63□□□□□ -0.39
UPF3AP3-201ENST00000420996 GGTLC1Q9BX51 225 aa12.63□□□□□ -0.39
UPF3AP3-201ENST00000420996 OR51E2Q9H255 320 aa12.63□□□□□ -0.39
UPF3AP3-201ENST00000420996 PRELID3BQ9Y3B1 194 aa12.63□□□□□ -0.39
UPF3AP3-201ENST00000420996 A0A075B6Q4 140 aa12.62□□□□□ -0.39
UPF3AP3-201ENST00000420996 CASQ2O14958 399 aaPredicted RBP12.62□□□□□ -0.39
UPF3AP3-201ENST00000420996 LY6G6CO95867 125 aa12.62□□□□□ -0.39
UPF3AP3-201ENST00000420996 ARL3P36405 182 aa12.62□□□□□ -0.39
UPF3AP3-201ENST00000420996 TALDO1P37837 337 aa12.62□□□□□ -0.39
UPF3AP3-201ENST00000420996 FABP5Q01469 135 aa12.62□□□□□ -0.39
UPF3AP3-201ENST00000420996 MLLT11Q13015 90 aaPredicted RBP12.62□□□□□ -0.39
UPF3AP3-201ENST00000420996 ARFRP1Q13795 201 aa12.62□□□□□ -0.39
UPF3AP3-201ENST00000420996 ANKRD55Q3KP44 614 aa12.62□□□□□ -0.39
UPF3AP3-201ENST00000420996 FAM106AQ4KMX7 169 aa12.62□□□□□ -0.39
UPF3AP3-201ENST00000420996 KCTD9Q7L273 389 aa12.62□□□□□ -0.39
UPF3AP3-201ENST00000420996 ZNF645Q8N7E2 425 aa12.62□□□□□ -0.39
UPF3AP3-201ENST00000420996 CACNG8Q8WXS5 425 aa12.62□□□□□ -0.39
UPF3AP3-201ENST00000420996 CCDC140Q96MF4 163 aa12.62□□□□□ -0.39
UPF3AP3-201ENST00000420996 ST6GALNAC5Q9BVH7 336 aa12.62□□□□□ -0.39
UPF3AP3-201ENST00000420996 MRPS7Q9Y2R9 242 aaKnown RBP12.62□□□□□ -0.39
UPF3AP3-201ENST00000420996 IGKV1D-8A0A087WSZ0 117 aa12.61□□□□□ -0.39
UPF3AP3-201ENST00000420996 LOC102724200A0A096LPH7 203 aaPredicted RBP12.61□□□□□ -0.39
UPF3AP3-201ENST00000420996 TMEM213A2RRL7 107 aa12.61□□□□□ -0.39
UPF3AP3-201ENST00000420996 DPPA5A6NC42 116 aa12.61□□□□□ -0.39
UPF3AP3-201ENST00000420996 A8MWP6 167 aa12.61□□□□□ -0.39
UPF3AP3-201ENST00000420996 IL6RP08887 468 aaPredicted RBP12.61□□□□□ -0.39
UPF3AP3-201ENST00000420996 RAB6AP20340 208 aa12.61□□□□□ -0.39
UPF3AP3-201ENST00000420996 CLEC19AQ6UXS0 136 aa12.61□□□□□ -0.39
UPF3AP3-201ENST00000420996 UXS1Q8NBZ7 420 aa12.61□□□□□ -0.39
UPF3AP3-201ENST00000420996 VSTM2AQ8TAG5 236 aa12.61□□□□□ -0.39
UPF3AP3-201ENST00000420996 FANCD2OSQ96PS1 177 aa12.61□□□□□ -0.39
UPF3AP3-201ENST00000420996 VCXQ9H320 206 aa12.61□□□□□ -0.39
UPF3AP3-201ENST00000420996 DUSP21Q9H596 190 aa12.61□□□□□ -0.39
UPF3AP3-201ENST00000420996 ACOT13Q9NPJ3 140 aa12.61□□□□□ -0.39
UPF3AP3-201ENST00000420996 SLC2A9Q9NRM0 540 aa12.61□□□□□ -0.39
UPF3AP3-201ENST00000420996 MLXQ9UH92 298 aa12.61□□□□□ -0.39
UPF3AP3-201ENST00000420996 TPRKBQ9Y3C4 175 aa12.61□□□□□ -0.39
UPF3AP3-201ENST00000420996 OR2W1Q9Y3N9 320 aa12.61□□□□□ -0.39
UPF3AP3-201ENST00000420996 SELENOKQ9Y6D0 94 aa12.61□□□□□ -0.39
UPF3AP3-201ENST00000420996 ZNF320A2RRD8 509 aa12.6□□□□□ -0.39
UPF3AP3-201ENST00000420996 CXorf65A6NEN9 183 aa12.6□□□□□ -0.39
UPF3AP3-201ENST00000420996 ANKRD65E5RJM6 399 aa12.6□□□□□ -0.39
UPF3AP3-201ENST00000420996 E7EUB6 86 aa12.6□□□□□ -0.39
UPF3AP3-201ENST00000420996 J3QRK9 145 aa12.6□□□□□ -0.39
UPF3AP3-201ENST00000420996 SLC22A5O76082 557 aa12.6□□□□□ -0.39
UPF3AP3-201ENST00000420996 NDUFB8O95169 186 aa12.6□□□□□ -0.39
UPF3AP3-201ENST00000420996 IGHV3-23P01764 117 aa12.6□□□□□ -0.39
UPF3AP3-201ENST00000420996 HLA-DQB1P01920 261 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms