RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 SAP30O75446 220 aa11.21□□□□□ -0.61
NIF3L1-205ENST00000409588 TUSC2O75896 110 aa11.21□□□□□ -0.61
NIF3L1-205ENST00000409588 TNFAIP8O95379 198 aa11.21□□□□□ -0.61
NIF3L1-205ENST00000409588 NFYAP23511 347 aaPredicted RBP11.21□□□□□ -0.61
NIF3L1-205ENST00000409588 ARPC4P59998 168 aa11.21□□□□□ -0.61
NIF3L1-205ENST00000409588 PJVKQ0ZLH3 352 aa11.21□□□□□ -0.61
NIF3L1-205ENST00000409588 CDK10Q15131 360 aa11.21□□□□□ -0.61
NIF3L1-205ENST00000409588 XP32Q5T750 250 aa11.21□□□□□ -0.61
NIF3L1-205ENST00000409588 SLC25A42Q86VD7 318 aa11.21□□□□□ -0.61
NIF3L1-205ENST00000409588 HOGA1Q86XE5 327 aa11.21□□□□□ -0.61
NIF3L1-205ENST00000409588 BEST4Q8NFU0 473 aa11.21□□□□□ -0.61
NIF3L1-205ENST00000409588 OR5T1Q8NG75 326 aa11.21□□□□□ -0.61
NIF3L1-205ENST00000409588 NUDCD2Q8WVJ2 157 aa11.21□□□□□ -0.61
NIF3L1-205ENST00000409588 BORCS5Q969J3 196 aa11.21□□□□□ -0.61
NIF3L1-205ENST00000409588 PHB2Q99623 299 aa11.21□□□□□ -0.61
NIF3L1-205ENST00000409588 DCUN1D5Q9BTE7 237 aa11.21□□□□□ -0.61
NIF3L1-205ENST00000409588 COL7A1Q02388 2944 aa11.21□□□□□ -0.62
NIF3L1-205ENST00000409588 IGHV4OR15-8A0A075B7B6 117 aa11.2□□□□□ -0.62
NIF3L1-205ENST00000409588 A0A087WW49 117 aa11.2□□□□□ -0.62
NIF3L1-205ENST00000409588 XRCC3O43542 346 aa11.2□□□□□ -0.62
NIF3L1-205ENST00000409588 SSX5O60225 188 aa11.2□□□□□ -0.62
NIF3L1-205ENST00000409588 FCGR3BO75015 233 aa11.2□□□□□ -0.62
NIF3L1-205ENST00000409588 HRASP01112 189 aa11.2□□□□□ -0.62
NIF3L1-205ENST00000409588 MAS1LP35410 378 aa11.2□□□□□ -0.62
NIF3L1-205ENST00000409588 KIR2DS2P43631 304 aa11.2□□□□□ -0.62
NIF3L1-205ENST00000409588 SSBP2P81877 361 aaPredicted RBP11.2□□□□□ -0.62
NIF3L1-205ENST00000409588 KCTD9Q7L273 389 aa11.2□□□□□ -0.62
NIF3L1-205ENST00000409588 OR4S2Q8NH73 311 aa11.2□□□□□ -0.62
NIF3L1-205ENST00000409588 C5orf30Q96GV9 206 aa11.2□□□□□ -0.62
NIF3L1-205ENST00000409588 ALX4Q9H161 411 aaPredicted RBP11.2□□□□□ -0.62
NIF3L1-205ENST00000409588 SMAD5-AS1Q9Y6J3 95 aa11.2□□□□□ -0.62
NIF3L1-205ENST00000409588 AIREO43918 545 aa11.19□□□□□ -0.62
NIF3L1-205ENST00000409588 IGLV2-14P01704 120 aa11.19□□□□□ -0.62
NIF3L1-205ENST00000409588 IGHV3-11P01762 117 aa11.19□□□□□ -0.62
NIF3L1-205ENST00000409588 OR9G9P0C7N8 305 aa11.19□□□□□ -0.62
NIF3L1-205ENST00000409588 SLURP1P55000 103 aa11.19□□□□□ -0.62
NIF3L1-205ENST00000409588 TNXAQ16473 311 aa11.19□□□□□ -0.62
NIF3L1-205ENST00000409588 ZNF343Q6P1L6 599 aa11.19□□□□□ -0.62
NIF3L1-205ENST00000409588 MFSD4AQ8N468 514 aa11.19□□□□□ -0.62
NIF3L1-205ENST00000409588 TSPAN14Q8NG11 270 aa11.19□□□□□ -0.62
NIF3L1-205ENST00000409588 OR5H6Q8NGV6 325 aa11.19□□□□□ -0.62
NIF3L1-205ENST00000409588 CASTOR1Q8WTX7 329 aa11.19□□□□□ -0.62
NIF3L1-205ENST00000409588 GIMAP1Q8WWP7 306 aa11.19□□□□□ -0.62
NIF3L1-205ENST00000409588 SRSF12Q8WXF0 261 aaKnown RBP11.19□□□□□ -0.62
NIF3L1-205ENST00000409588 SLC25A38Q96DW6 304 aa11.19□□□□□ -0.62
NIF3L1-205ENST00000409588 AUNIPQ9H7T9 357 aa11.19□□□□□ -0.62
NIF3L1-205ENST00000409588 PEF1Q9UBV8 284 aaKnown RBP11.19□□□□□ -0.62
NIF3L1-205ENST00000409588 FAM223BA6NKX1 122 aa11.18□□□□□ -0.62
NIF3L1-205ENST00000409588 MPPED1O15442 326 aa11.18□□□□□ -0.62
NIF3L1-205ENST00000409588 OR2A4O95047 310 aa11.18□□□□□ -0.62
NIF3L1-205ENST00000409588 CLEC2LP0C7M8 214 aa11.18□□□□□ -0.62
NIF3L1-205ENST00000409588 FCGR2CP31995 323 aa11.18□□□□□ -0.62
NIF3L1-205ENST00000409588 KLF5Q13887 457 aaPredicted RBP11.18□□□□□ -0.62
NIF3L1-205ENST00000409588 MRGPRG-AS1Q2M3A8 158 aa11.18□□□□□ -0.62
NIF3L1-205ENST00000409588 FAM223AQ8IWN6 122 aa11.18□□□□□ -0.62
NIF3L1-205ENST00000409588 TTC9CQ8N5M4 171 aa11.18□□□□□ -0.62
NIF3L1-205ENST00000409588 OR5AP2Q8NGF4 316 aa11.18□□□□□ -0.62
NIF3L1-205ENST00000409588 ACOT12Q8WYK0 555 aa11.18□□□□□ -0.62
NIF3L1-205ENST00000409588 SNAPC3Q92966 411 aa11.18□□□□□ -0.62
NIF3L1-205ENST00000409588 CMTM3Q96MX0 182 aa11.18□□□□□ -0.62
NIF3L1-205ENST00000409588 WWC2-AS2Q96NR7 200 aa11.18□□□□□ -0.62
NIF3L1-205ENST00000409588 OR2A7Q96R45 310 aa11.18□□□□□ -0.62
NIF3L1-205ENST00000409588 PRR25Q96S07 402 aa11.18□□□□□ -0.62
NIF3L1-205ENST00000409588 RNF167Q9H6Y7 350 aa11.18□□□□□ -0.62
NIF3L1-205ENST00000409588 ZNF430Q9H8G1 570 aaPredicted RBP11.18□□□□□ -0.62
NIF3L1-205ENST00000409588 COA4Q9NYJ1 87 aa11.18□□□□□ -0.62
NIF3L1-205ENST00000409588 RBFOX2O43251 390 aaKnown RBP eCLIP11.17□□□□□ -0.62
NIF3L1-205ENST00000409588 LY86O95711 162 aa11.17□□□□□ -0.62
NIF3L1-205ENST00000409588 FGF2P09038 288 aa11.17□□□□□ -0.62
NIF3L1-205ENST00000409588 SAA1P0DJI8 122 aaPredicted RBP11.17□□□□□ -0.62
NIF3L1-205ENST00000409588 EIF4EBP1Q13541 118 aaPredicted RBP11.17□□□□□ -0.62
NIF3L1-205ENST00000409588 UBE2NLQ5JXB2 153 aa11.17□□□□□ -0.62
NIF3L1-205ENST00000409588 NECAP1Q8NC96 275 aa11.17□□□□□ -0.62
NIF3L1-205ENST00000409588 ADAD2Q8NCV1 583 aaKnown RBP11.17□□□□□ -0.62
NIF3L1-205ENST00000409588 OR4A5Q8NH83 315 aa11.17□□□□□ -0.62
NIF3L1-205ENST00000409588 CD300LFQ8TDQ1 290 aa11.17□□□□□ -0.62
NIF3L1-205ENST00000409588 TCTEX1D2Q8WW35 142 aa11.17□□□□□ -0.62
NIF3L1-205ENST00000409588 SIGLEC8Q9NYZ4 499 aa11.17□□□□□ -0.62
NIF3L1-205ENST00000409588 TRBV9A0A0B4J1U6 114 aa11.16□□□□□ -0.62
NIF3L1-205ENST00000409588 IGKV1D-13A0A0B4J2D9 117 aa11.16□□□□□ -0.62
NIF3L1-205ENST00000409588 J3QRK9 145 aa11.16□□□□□ -0.62
NIF3L1-205ENST00000409588 DHFRP00374 187 aa11.16□□□□□ -0.62
NIF3L1-205ENST00000409588 PPYP01298 95 aa11.16□□□□□ -0.62
NIF3L1-205ENST00000409588 IGKV1-13P0DP09 117 aa11.16□□□□□ -0.62
NIF3L1-205ENST00000409588 RPS19P39019 145 aaKnown RBP11.16□□□□□ -0.62
NIF3L1-205ENST00000409588 RPL30P62888 115 aaKnown RBP11.16□□□□□ -0.62
NIF3L1-205ENST00000409588 ATP5G2Q06055 141 aa11.16□□□□□ -0.62
NIF3L1-205ENST00000409588 CATR1Q13166 79 aa11.16□□□□□ -0.62
NIF3L1-205ENST00000409588 DHRS11Q6UWP2 260 aa11.16□□□□□ -0.62
NIF3L1-205ENST00000409588 ANKRD13BQ86YJ7 626 aa11.16□□□□□ -0.62
NIF3L1-205ENST00000409588 PUSL1Q8N0Z8 303 aaKnown RBP11.16□□□□□ -0.62
NIF3L1-205ENST00000409588 TMEM167AQ8TBQ9 72 aa11.16□□□□□ -0.62
NIF3L1-205ENST00000409588 YIPF6Q96EC8 236 aa11.16□□□□□ -0.62
NIF3L1-205ENST00000409588 ZNF257Q9Y2Q1 563 aa11.16□□□□□ -0.62
NIF3L1-205ENST00000409588 SORL1Q92673 2214 aa11.15□□□□□ -0.62
NIF3L1-205ENST00000409588 SMIM31A0A1B0GVY4 71 aa11.15□□□□□ -0.62
NIF3L1-205ENST00000409588 H0Y980 276 aa11.15□□□□□ -0.62
NIF3L1-205ENST00000409588 KBTBD11O94819 623 aa11.15□□□□□ -0.62
NIF3L1-205ENST00000409588 IGLV1-51P01701 117 aa11.15□□□□□ -0.62
NIF3L1-205ENST00000409588 GP9P14770 177 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms