RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 SLC38A6Q8IZM9 456 aa15.58■□□□□ 0.08
PDLIM2-207ENST00000409417 SPAG16Q8N0X2 631 aa15.58■□□□□ 0.08
PDLIM2-207ENST00000409417 OR51H1Q8NH63 302 aa15.58■□□□□ 0.08
PDLIM2-207ENST00000409417 CD300LFQ8TDQ1 290 aa15.58■□□□□ 0.08
PDLIM2-207ENST00000409417 RSRP1Q9BUV0 290 aa15.58■□□□□ 0.08
PDLIM2-207ENST00000409417 TNCP24821 2201 aa15.57■□□□□ 0.08
PDLIM2-207ENST00000409417 TRAV41A0A0B4J266 112 aa15.57■□□□□ 0.08
PDLIM2-207ENST00000409417 G3V318 75 aa15.57■□□□□ 0.08
PDLIM2-207ENST00000409417 IGHG4P01861 327 aa15.57■□□□□ 0.08
PDLIM2-207ENST00000409417 EGR2P11161 476 aaPredicted RBP15.57■□□□□ 0.08
PDLIM2-207ENST00000409417 PTBP1P26599 531 aaKnown RBP eCLIP15.57■□□□□ 0.08
PDLIM2-207ENST00000409417 FOXE3Q13461 319 aa15.57■□□□□ 0.08
PDLIM2-207ENST00000409417 FXYD3Q14802 87 aa15.57■□□□□ 0.08
PDLIM2-207ENST00000409417 TREML4Q6UXN2 200 aa15.57■□□□□ 0.08
PDLIM2-207ENST00000409417 LHFPL1Q86WI0 220 aa15.57■□□□□ 0.08
PDLIM2-207ENST00000409417 POC5Q8NA72 575 aa15.57■□□□□ 0.08
PDLIM2-207ENST00000409417 OR6Q1Q8NGQ2 317 aa15.57■□□□□ 0.08
PDLIM2-207ENST00000409417 TERB2Q8NHR7 220 aa15.57■□□□□ 0.08
PDLIM2-207ENST00000409417 FBXO7Q9Y3I1 522 aa15.57■□□□□ 0.08
PDLIM2-207ENST00000409417 TSPAN15O95858 294 aa15.56■□□□□ 0.08
PDLIM2-207ENST00000409417 RLN1P04808 185 aa15.56■□□□□ 0.08
PDLIM2-207ENST00000409417 ELANEP08246 267 aa15.56■□□□□ 0.08
PDLIM2-207ENST00000409417 SAA1P0DJI8 122 aaPredicted RBP15.56■□□□□ 0.08
PDLIM2-207ENST00000409417 S100GP29377 79 aa15.56■□□□□ 0.08
PDLIM2-207ENST00000409417 PPIFP30405 207 aaKnown RBP15.56■□□□□ 0.08
PDLIM2-207ENST00000409417 ETV6P41212 452 aa15.56■□□□□ 0.08
PDLIM2-207ENST00000409417 SSBP2P81877 361 aaPredicted RBP15.56■□□□□ 0.08
PDLIM2-207ENST00000409417 TMEM267Q0VDI3 215 aaPredicted RBP15.56■□□□□ 0.08
PDLIM2-207ENST00000409417 PRSS8Q16651 343 aa15.56■□□□□ 0.08
PDLIM2-207ENST00000409417 MRGPRG-AS1Q2M3A8 158 aa15.56■□□□□ 0.08
PDLIM2-207ENST00000409417 SPANXN2Q5MJ10 180 aa15.56■□□□□ 0.08
PDLIM2-207ENST00000409417 IDO2Q6ZQW0 420 aa15.56■□□□□ 0.08
PDLIM2-207ENST00000409417 RNF152Q8N8N0 203 aa15.56■□□□□ 0.08
PDLIM2-207ENST00000409417 MINDY2Q8NBR6 621 aa15.56■□□□□ 0.08
PDLIM2-207ENST00000409417 ABHD5Q8WTS1 349 aa15.56■□□□□ 0.08
PDLIM2-207ENST00000409417 ARPC1AQ92747 370 aa15.56■□□□□ 0.08
PDLIM2-207ENST00000409417 THAP7Q9BT49 309 aaPredicted RBP15.56■□□□□ 0.08
PDLIM2-207ENST00000409417 NUBP2Q9Y5Y2 271 aa15.56■□□□□ 0.08
PDLIM2-207ENST00000409417 ARPC1BO15143 372 aaKnown RBP15.55■□□□□ 0.08
PDLIM2-207ENST00000409417 CNIH1O95406 144 aa15.55■□□□□ 0.08
PDLIM2-207ENST00000409417 HRASP01112 189 aa15.55■□□□□ 0.08
PDLIM2-207ENST00000409417 PHLDA2Q53GA4 152 aa15.55■□□□□ 0.08
PDLIM2-207ENST00000409417 PYDC2Q56P42 97 aa15.55■□□□□ 0.08
PDLIM2-207ENST00000409417 C19orf54Q5BKX5 351 aa15.55■□□□□ 0.08
PDLIM2-207ENST00000409417 KHDC1LQ5JSQ8 128 aa15.55■□□□□ 0.08
PDLIM2-207ENST00000409417 VKORC1L1Q8N0U8 176 aa15.55■□□□□ 0.08
PDLIM2-207ENST00000409417 TCTEX1D1Q8N7M0 179 aa15.55■□□□□ 0.08
PDLIM2-207ENST00000409417 VSTM2AQ8TAG5 236 aa15.55■□□□□ 0.08
PDLIM2-207ENST00000409417 RHOVQ96L33 236 aa15.55■□□□□ 0.08
PDLIM2-207ENST00000409417 AIFM2Q9BRQ8 373 aa15.55■□□□□ 0.08
PDLIM2-207ENST00000409417 ZFP57Q9NU63 452 aa15.55■□□□□ 0.08
PDLIM2-207ENST00000409417 A0A1W2PRX2 142 aa15.54■□□□□ 0.08
PDLIM2-207ENST00000409417 ANKRD20A5PA0PJZ0 165 aa15.54■□□□□ 0.08
PDLIM2-207ENST00000409417 CREBL2O60519 120 aaPredicted RBP15.54■□□□□ 0.08
PDLIM2-207ENST00000409417 HPRT1P00492 218 aa15.54■□□□□ 0.08
PDLIM2-207ENST00000409417 ZNF735P0CB33 412 aa15.54■□□□□ 0.08
PDLIM2-207ENST00000409417 AKAIN1P0CW23 69 aa15.54■□□□□ 0.08
PDLIM2-207ENST00000409417 GNB1P62873 340 aa15.54■□□□□ 0.08
PDLIM2-207ENST00000409417 ZNF79Q15937 498 aa15.54■□□□□ 0.08
PDLIM2-207ENST00000409417 ECSCRQ19T08 205 aa15.54■□□□□ 0.08
PDLIM2-207ENST00000409417 AKIRIN2Q53H80 203 aa15.54■□□□□ 0.08
PDLIM2-207ENST00000409417 CXorf66Q5JRM2 361 aaPredicted RBP15.54■□□□□ 0.08
PDLIM2-207ENST00000409417 Q8N402 240 aa15.54■□□□□ 0.08
PDLIM2-207ENST00000409417 OR4F17Q8NGA8 305 aa15.54■□□□□ 0.08
PDLIM2-207ENST00000409417 GRPEL2Q8TAA5 225 aa15.54■□□□□ 0.08
PDLIM2-207ENST00000409417 OR4F4Q96R69 305 aa15.54■□□□□ 0.08
PDLIM2-207ENST00000409417 FAM103A1Q9BTL3 118 aaKnown RBP15.54■□□□□ 0.08
PDLIM2-207ENST00000409417 PLEKHA2Q9HB19 425 aa15.54■□□□□ 0.08
PDLIM2-207ENST00000409417 OR2A4O95047 310 aa15.53■□□□□ 0.08
PDLIM2-207ENST00000409417 IGLV1-40P01703 118 aa15.53■□□□□ 0.08
PDLIM2-207ENST00000409417 F2RP25116 425 aa15.53■□□□□ 0.08
PDLIM2-207ENST00000409417 PSMB8P28062 276 aa15.53■□□□□ 0.08
PDLIM2-207ENST00000409417 TAS2R31P59538 309 aa15.53■□□□□ 0.08
PDLIM2-207ENST00000409417 RPL23AP62750 156 aaKnown RBP15.53■□□□□ 0.08
PDLIM2-207ENST00000409417 SCGB2B2Q4G0G5 96 aa15.53■□□□□ 0.08
PDLIM2-207ENST00000409417 FAAP20Q6NZ36 180 aa15.53■□□□□ 0.08
PDLIM2-207ENST00000409417 OR4C16Q8NGL9 310 aa15.53■□□□□ 0.08
PDLIM2-207ENST00000409417 R3HDM4Q96D70 268 aa15.53■□□□□ 0.08
PDLIM2-207ENST00000409417 ZNF486Q96H40 463 aaPredicted RBP15.53■□□□□ 0.08
PDLIM2-207ENST00000409417 OR2A7Q96R45 310 aa15.53■□□□□ 0.08
PDLIM2-207ENST00000409417 ZNF430Q9H8G1 570 aaPredicted RBP15.53■□□□□ 0.08
PDLIM2-207ENST00000409417 DISC1C4P0D8 188 aa15.52■□□□□ 0.08
PDLIM2-207ENST00000409417 RPLP1P05386 114 aaKnown RBP15.52■□□□□ 0.08
PDLIM2-207ENST00000409417 PGAM2P15259 253 aa15.52■□□□□ 0.08
PDLIM2-207ENST00000409417 MMD2Q8IY49 270 aa15.52■□□□□ 0.08
PDLIM2-207ENST00000409417 PUSL1Q8N0Z8 303 aaKnown RBP15.52■□□□□ 0.08
PDLIM2-207ENST00000409417 LFNGQ8NES3 379 aa15.52■□□□□ 0.08
PDLIM2-207ENST00000409417 FAM110DQ8TAY7 271 aaPredicted RBP15.52■□□□□ 0.08
PDLIM2-207ENST00000409417 SLC2A9Q9NRM0 540 aa15.52■□□□□ 0.08
PDLIM2-207ENST00000409417 FOXA2Q9Y261 457 aaPredicted RBP15.52■□□□□ 0.08
PDLIM2-207ENST00000409417 A6NHS1 94 aa15.52■□□□□ 0.07
PDLIM2-207ENST00000409417 KBTBD11O94819 623 aa15.52■□□□□ 0.07
PDLIM2-207ENST00000409417 NQO2P16083 231 aa15.52■□□□□ 0.07
PDLIM2-207ENST00000409417 UNQ5815/PRO19632Q6UWF5 114 aa15.52■□□□□ 0.07
PDLIM2-207ENST00000409417 LCNL1Q6ZST4 164 aa15.52■□□□□ 0.07
PDLIM2-207ENST00000409417 ZFAND1Q8TCF1 268 aa15.52■□□□□ 0.07
PDLIM2-207ENST00000409417 TRIM63Q969Q1 353 aa15.52■□□□□ 0.07
PDLIM2-207ENST00000409417 COMMD9Q9P000 198 aa15.52■□□□□ 0.07
PDLIM2-207ENST00000409417 NOTCH3Q9UM47 2321 aa15.52■□□□□ 0.07
PDLIM2-207ENST00000409417 ACTL6BO94805 426 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms