RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 PATZ1Q9HBE1 687 aaKnown RBP12.35□□□□□ -0.43
SCAF11-204ENST00000395454 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.35□□□□□ -0.43
SCAF11-204ENST00000395454 SESN1Q9Y6P5 492 aa12.35□□□□□ -0.43
SCAF11-204ENST00000395454 FLNAP21333 2647 aaKnown RBP12.34□□□□□ -0.43
SCAF11-204ENST00000395454 SAA2-SAA4A0A096LPE2 208 aa12.34□□□□□ -0.43
SCAF11-204ENST00000395454 MARCH11A6NNE9 402 aa12.34□□□□□ -0.43
SCAF11-204ENST00000395454 KRBOX1C9JBD0 128 aa12.34□□□□□ -0.43
SCAF11-204ENST00000395454 M0R1X1 148 aa12.34□□□□□ -0.43
SCAF11-204ENST00000395454 NDUFB3O43676 98 aa12.34□□□□□ -0.43
SCAF11-204ENST00000395454 MMP23AO75900 390 aa12.34□□□□□ -0.43
SCAF11-204ENST00000395454 KRASP01116 189 aa12.34□□□□□ -0.43
SCAF11-204ENST00000395454 SAA2P0DJI9 122 aaPredicted RBP12.34□□□□□ -0.43
SCAF11-204ENST00000395454 NDUFB7P17568 137 aa12.34□□□□□ -0.43
SCAF11-204ENST00000395454 RPL39P5Q59GN2 51 aa12.34□□□□□ -0.43
SCAF11-204ENST00000395454 LRRC10Q5BKY1 277 aa12.34□□□□□ -0.43
SCAF11-204ENST00000395454 OR2B11Q5JQS5 317 aa12.34□□□□□ -0.43
SCAF11-204ENST00000395454 UQCC3Q6UW78 93 aa12.34□□□□□ -0.43
SCAF11-204ENST00000395454 C1orf229Q6ZS94 237 aaPredicted RBP12.34□□□□□ -0.43
SCAF11-204ENST00000395454 MAPK1IP1LQ8NDC0 245 aa12.34□□□□□ -0.43
SCAF11-204ENST00000395454 ZNF596Q8TC21 504 aa12.34□□□□□ -0.43
SCAF11-204ENST00000395454 NEIL1Q96FI4 390 aaPredicted RBP12.34□□□□□ -0.43
SCAF11-204ENST00000395454 ADTRPQ96IZ2 230 aa12.34□□□□□ -0.43
SCAF11-204ENST00000395454 PARP11Q9NR21 331 aa12.34□□□□□ -0.43
SCAF11-204ENST00000395454 DVL1O14640 695 aa12.33□□□□□ -0.44
SCAF11-204ENST00000395454 IGHV2-5P01817 119 aa12.33□□□□□ -0.44
SCAF11-204ENST00000395454 DLX6P56179 175 aa12.33□□□□□ -0.44
SCAF11-204ENST00000395454 LINC00205P59089 165 aa12.33□□□□□ -0.44
SCAF11-204ENST00000395454 PDLIM3Q53GG5 364 aaPredicted RBP12.33□□□□□ -0.44
SCAF11-204ENST00000395454 TMEM200BQ69YZ2 307 aa12.33□□□□□ -0.44
SCAF11-204ENST00000395454 STX12Q86Y82 276 aa12.33□□□□□ -0.44
SCAF11-204ENST00000395454 OR5C1Q8NGR4 320 aa12.33□□□□□ -0.44
SCAF11-204ENST00000395454 RAB39BQ96DA2 213 aa12.33□□□□□ -0.44
SCAF11-204ENST00000395454 ZNF714Q96N38 554 aa12.33□□□□□ -0.44
SCAF11-204ENST00000395454 YLPM1P49750 1951 aaKnown RBP12.33□□□□□ -0.44
SCAF11-204ENST00000395454 A0A087X0M5 115 aa12.33□□□□□ -0.44
SCAF11-204ENST00000395454 A0A1B0GX30 115 aa12.33□□□□□ -0.44
SCAF11-204ENST00000395454 ZNF705EA8MWA4 302 aaPredicted RBP12.33□□□□□ -0.44
SCAF11-204ENST00000395454 MED6O75586 246 aa12.33□□□□□ -0.44
SCAF11-204ENST00000395454 THBS3P49746 956 aa12.33□□□□□ -0.44
SCAF11-204ENST00000395454 RAB5CP51148 216 aa12.33□□□□□ -0.44
SCAF11-204ENST00000395454 UBE2KP61086 200 aa12.33□□□□□ -0.44
SCAF11-204ENST00000395454 LMO4P61968 165 aa12.33□□□□□ -0.44
SCAF11-204ENST00000395454 GNB2P62879 340 aa12.33□□□□□ -0.44
SCAF11-204ENST00000395454 MARC2Q969Z3 335 aa12.33□□□□□ -0.44
SCAF11-204ENST00000395454 R3HDM4Q96D70 268 aa12.33□□□□□ -0.44
SCAF11-204ENST00000395454 TSNAXQ99598 290 aaKnown RBP12.33□□□□□ -0.44
SCAF11-204ENST00000395454 MMP26Q9NRE1 261 aa12.33□□□□□ -0.44
SCAF11-204ENST00000395454 PRELID3BQ9Y3B1 194 aa12.33□□□□□ -0.44
SCAF11-204ENST00000395454 TRBV23-1A0A0A0MS06 115 aa12.32□□□□□ -0.44
SCAF11-204ENST00000395454 CYSRT1A8MQ03 144 aa12.32□□□□□ -0.44
SCAF11-204ENST00000395454 NXPH3O95157 252 aa12.32□□□□□ -0.44
SCAF11-204ENST00000395454 DYNLT3P51808 116 aa12.32□□□□□ -0.44
SCAF11-204ENST00000395454 BLOC1S1P78537 153 aa12.32□□□□□ -0.44
SCAF11-204ENST00000395454 POU2AF1Q16633 256 aa12.32□□□□□ -0.44
SCAF11-204ENST00000395454 PRAMEF5Q5TYX0 476 aa12.32□□□□□ -0.44
SCAF11-204ENST00000395454 TMEM14EPQ6UXP3 125 aa12.32□□□□□ -0.44
SCAF11-204ENST00000395454 IL34Q6ZMJ4 242 aa12.32□□□□□ -0.44
SCAF11-204ENST00000395454 H2BFWTQ7Z2G1 175 aa12.32□□□□□ -0.44
SCAF11-204ENST00000395454 LEAP2Q969E1 77 aa12.32□□□□□ -0.44
SCAF11-204ENST00000395454 ATP5SQ99766 215 aa12.32□□□□□ -0.44
SCAF11-204ENST00000395454 SSBP3Q9BWW4 388 aaPredicted RBP12.32□□□□□ -0.44
SCAF11-204ENST00000395454 ARHGAP32A7KAX9 2087 aa12.32□□□□□ -0.44
SCAF11-204ENST00000395454 A0A096LNT2 108 aa12.31□□□□□ -0.44
SCAF11-204ENST00000395454 FCGR3BO75015 233 aa12.31□□□□□ -0.44
SCAF11-204ENST00000395454 FBXO24O75426 580 aa12.31□□□□□ -0.44
SCAF11-204ENST00000395454 DFFBO76075 338 aa12.31□□□□□ -0.44
SCAF11-204ENST00000395454 CST7O76096 145 aa12.31□□□□□ -0.44
SCAF11-204ENST00000395454 PXDC1Q5TGL8 231 aa12.31□□□□□ -0.44
SCAF11-204ENST00000395454 ZNF841Q6ZN19 808 aa12.31□□□□□ -0.44
SCAF11-204ENST00000395454 CCDC28AQ8IWP9 274 aa12.31□□□□□ -0.44
SCAF11-204ENST00000395454 LINC00311Q8N616 119 aa12.31□□□□□ -0.44
SCAF11-204ENST00000395454 OR4S2Q8NH73 311 aa12.31□□□□□ -0.44
SCAF11-204ENST00000395454 S1PR3Q99500 378 aa12.31□□□□□ -0.44
SCAF11-204ENST00000395454 RBKSQ9H477 322 aa12.31□□□□□ -0.44
SCAF11-204ENST00000395454 CACFD1Q9UGQ2 172 aa12.31□□□□□ -0.44
SCAF11-204ENST00000395454 WNK2Q9Y3S1 2297 aa12.31□□□□□ -0.44
SCAF11-204ENST00000395454 ABCA2Q9BZC7 2435 aa12.31□□□□□ -0.44
SCAF11-204ENST00000395454 CR1P17927 2039 aa12.31□□□□□ -0.44
SCAF11-204ENST00000395454 LY86O95711 162 aa12.31□□□□□ -0.44
SCAF11-204ENST00000395454 CLINT1Q14677 625 aa12.31□□□□□ -0.44
SCAF11-204ENST00000395454 WDR25Q64LD2 544 aaPredicted RBP12.31□□□□□ -0.44
SCAF11-204ENST00000395454 FAM71F2Q6NXP2 309 aa12.31□□□□□ -0.44
SCAF11-204ENST00000395454 BTNL8Q6UX41 500 aa12.31□□□□□ -0.44
SCAF11-204ENST00000395454 ZNF833PQ6ZTB9 187 aa12.31□□□□□ -0.44
SCAF11-204ENST00000395454 H1FXQ92522 213 aaKnown RBP12.31□□□□□ -0.44
SCAF11-204ENST00000395454 LINC00052Q96N35 136 aa12.31□□□□□ -0.44
SCAF11-204ENST00000395454 PARD6GQ9BYG4 376 aaPredicted RBP12.31□□□□□ -0.44
SCAF11-204ENST00000395454 PSENENQ9NZ42 101 aa12.31□□□□□ -0.44
SCAF11-204ENST00000395454 TEX46H3BTG2 121 aa12.3□□□□□ -0.44
SCAF11-204ENST00000395454 TRIM77I1YAP6 450 aa12.3□□□□□ -0.44
SCAF11-204ENST00000395454 NQO2P16083 231 aa12.3□□□□□ -0.44
SCAF11-204ENST00000395454 NFYBP25208 207 aa12.3□□□□□ -0.44
SCAF11-204ENST00000395454 LOXL1Q08397 574 aaPredicted RBP12.3□□□□□ -0.44
SCAF11-204ENST00000395454 HAPLN4Q86UW8 402 aa12.3□□□□□ -0.44
SCAF11-204ENST00000395454 ZNF383Q8NA42 475 aa12.3□□□□□ -0.44
SCAF11-204ENST00000395454 OR52E5Q8NH55 327 aa12.3□□□□□ -0.44
SCAF11-204ENST00000395454 GNPNAT1Q96EK6 184 aaPredicted RBP12.3□□□□□ -0.44
SCAF11-204ENST00000395454 CIB3Q96Q77 187 aaPredicted RBP12.3□□□□□ -0.44
SCAF11-204ENST00000395454 SH3BGRL3Q9H299 93 aa12.3□□□□□ -0.44
SCAF11-204ENST00000395454 HIPK2Q9H2X6 1198 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms