RNA–Protein interactions for RNA: ENST00000393965.7

CCDC142-202, Transcript of coiled-coil domain containing 142, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC142, Length 3,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-202ENST00000393965 RPL29P47914 159 aaKnown RBP11.45□□□□□ -0.58
CCDC142-202ENST00000393965 ZNF83P51522 516 aa11.45□□□□□ -0.58
CCDC142-202ENST00000393965 MRPL49Q13405 166 aaKnown RBP11.45□□□□□ -0.58
CCDC142-202ENST00000393965 INO80CQ6PI98 192 aaPredicted RBP11.45□□□□□ -0.58
CCDC142-202ENST00000393965 ZNF705AQ6ZN79 300 aaPredicted RBP11.45□□□□□ -0.58
CCDC142-202ENST00000393965 OR10A7Q8NGE5 316 aa11.45□□□□□ -0.58
CCDC142-202ENST00000393965 OR13A1Q8NGR1 328 aa11.45□□□□□ -0.58
CCDC142-202ENST00000393965 MBNL3Q9NUK0 354 aaKnown RBP11.45□□□□□ -0.58
CCDC142-202ENST00000393965 TIMM8BQ9Y5J9 83 aaPredicted RBP11.45□□□□□ -0.58
CCDC142-202ENST00000393965 TRAV17A0A0B4J275 112 aa11.44□□□□□ -0.58
CCDC142-202ENST00000393965 ZNF729A6NN14 1252 aaPredicted RBP11.44□□□□□ -0.58
CCDC142-202ENST00000393965 TGIF2LXQ8IUE1 241 aa11.44□□□□□ -0.58
CCDC142-202ENST00000393965 ZNF525Q8N782 197 aa11.44□□□□□ -0.58
CCDC142-202ENST00000393965 PARLQ9H300 379 aa11.44□□□□□ -0.58
CCDC142-202ENST00000393965 RIMS4Q9H426 269 aaPredicted RBP11.44□□□□□ -0.58
CCDC142-202ENST00000393965 CGAP01215 116 aa11.44□□□□□ -0.58
CCDC142-202ENST00000393965 SLC25A6P12236 298 aa11.44□□□□□ -0.58
CCDC142-202ENST00000393965 GNB2P62879 340 aa11.44□□□□□ -0.58
CCDC142-202ENST00000393965 CD177Q8N6Q3 437 aa11.44□□□□□ -0.58
CCDC142-202ENST00000393965 PRDM13Q9H4Q3 707 aa11.44□□□□□ -0.58
CCDC142-202ENST00000393965 HES4Q9HCC6 221 aa11.44□□□□□ -0.58
CCDC142-202ENST00000393965 ZNF71Q9NQZ8 489 aaPredicted RBP11.44□□□□□ -0.58
CCDC142-202ENST00000393965 POLDIP2Q9Y2S7 368 aa11.44□□□□□ -0.58
CCDC142-202ENST00000393965 C17orf98A8MV24 154 aa11.44□□□□□ -0.58
CCDC142-202ENST00000393965 NDUFB4O95168 129 aa11.44□□□□□ -0.58
CCDC142-202ENST00000393965 SELLP14151 372 aa11.44□□□□□ -0.58
CCDC142-202ENST00000393965 ATP5G3P48201 142 aa11.44□□□□□ -0.58
CCDC142-202ENST00000393965 ACP7Q6ZNF0 438 aa11.44□□□□□ -0.58
CCDC142-202ENST00000393965 GCM1Q9NP62 436 aa11.44□□□□□ -0.58
CCDC142-202ENST00000393965 A0A1W2PPV4 95 aa11.43□□□□□ -0.58
CCDC142-202ENST00000393965 PRR33A8MZF0 331 aa11.43□□□□□ -0.58
CCDC142-202ENST00000393965 HBZP02008 142 aa11.43□□□□□ -0.58
CCDC142-202ENST00000393965 DUX4L9Q6RFH8 374 aaPredicted RBP11.43□□□□□ -0.58
CCDC142-202ENST00000393965 OR2Z1Q8NG97 314 aa11.43□□□□□ -0.58
CCDC142-202ENST00000393965 TAF15Q92804 592 aaKnown RBP eCLIP11.43□□□□□ -0.58
CCDC142-202ENST00000393965 RAB24Q969Q5 203 aa11.43□□□□□ -0.58
CCDC142-202ENST00000393965 FAM122AQ96E09 287 aa11.43□□□□□ -0.58
CCDC142-202ENST00000393965 KCNIP1Q9NZI2 227 aa11.43□□□□□ -0.58
CCDC142-202ENST00000393965 GNG12Q9UBI6 72 aa11.43□□□□□ -0.58
CCDC142-202ENST00000393965 SPTBN4Q9H254 2564 aa11.43□□□□□ -0.58
CCDC142-202ENST00000393965 IFNA1P01562 189 aa11.43□□□□□ -0.58
CCDC142-202ENST00000393965 HOXC12P31275 282 aa11.43□□□□□ -0.58
CCDC142-202ENST00000393965 TCL1AP56279 114 aa11.43□□□□□ -0.58
CCDC142-202ENST00000393965 ZNF474Q6S9Z5 364 aaPredicted RBP11.43□□□□□ -0.58
CCDC142-202ENST00000393965 TGIF2LYQ8IUE0 185 aa11.43□□□□□ -0.58
CCDC142-202ENST00000393965 WIPI2Q9Y4P8 454 aa11.43□□□□□ -0.58
CCDC142-202ENST00000393965 RAI1Q7Z5J4 1906 aaPredicted RBP11.43□□□□□ -0.58
CCDC142-202ENST00000393965 FCGR3BO75015 233 aa11.42□□□□□ -0.58
CCDC142-202ENST00000393965 IGHV3-48P01763 117 aa11.42□□□□□ -0.58
CCDC142-202ENST00000393965 C1QTNF9P0C862 333 aa11.42□□□□□ -0.58
CCDC142-202ENST00000393965 H2BFWTQ7Z2G1 175 aa11.42□□□□□ -0.58
CCDC142-202ENST00000393965 OR10P1Q8NGE3 313 aa11.42□□□□□ -0.58
CCDC142-202ENST00000393965 LURAP1Q96LR2 239 aa11.42□□□□□ -0.58
CCDC142-202ENST00000393965 HEYLQ9NQ87 328 aaPredicted RBP11.42□□□□□ -0.58
CCDC142-202ENST00000393965 VAX2Q9UIW0 290 aa11.42□□□□□ -0.58
CCDC142-202ENST00000393965 FAM215AQ9Y5M1 114 aa11.42□□□□□ -0.58
CCDC142-202ENST00000393965 TET2Q6N021 2002 aaPredicted RBP11.42□□□□□ -0.58
CCDC142-202ENST00000393965 YLPM1P49750 1951 aaKnown RBP11.42□□□□□ -0.58
CCDC142-202ENST00000393965 CYB5R3P00387 301 aaPredicted RBP11.42□□□□□ -0.58
CCDC142-202ENST00000393965 OR4A8P0C604 315 aa11.42□□□□□ -0.58
CCDC142-202ENST00000393965 CD82P27701 267 aa11.42□□□□□ -0.58
CCDC142-202ENST00000393965 MEF2BQ02080 365 aaPredicted RBP11.42□□□□□ -0.58
CCDC142-202ENST00000393965 RAB40CQ96S21 281 aa11.42□□□□□ -0.58
CCDC142-202ENST00000393965 SDF2L1Q9HCN8 221 aa11.42□□□□□ -0.58
CCDC142-202ENST00000393965 PLSCR4Q9NRQ2 329 aa11.42□□□□□ -0.58
CCDC142-202ENST00000393965 A0A1B0GU03 582 aa11.42□□□□□ -0.58
CCDC142-202ENST00000393965 AMBPP02760 352 aa11.42□□□□□ -0.58
CCDC142-202ENST00000393965 SSTP61278 116 aa11.42□□□□□ -0.58
CCDC142-202ENST00000393965 KIAA1644Q3SXP7 199 aa11.42□□□□□ -0.58
CCDC142-202ENST00000393965 SARAFQ96BY9 339 aa11.42□□□□□ -0.58
CCDC142-202ENST00000393965 TLN1Q9Y490 2541 aaKnown RBP11.41□□□□□ -0.58
CCDC142-202ENST00000393965 LINC00473A8K010 186 aa11.41□□□□□ -0.58
CCDC142-202ENST00000393965 GYPAP02724 150 aa11.41□□□□□ -0.58
CCDC142-202ENST00000393965 HIST1H1BP16401 226 aaKnown RBP11.41□□□□□ -0.58
CCDC142-202ENST00000393965 TMEM41BQ5BJD5 291 aa11.41□□□□□ -0.58
CCDC142-202ENST00000393965 TMEM256Q8N2U0 113 aa11.41□□□□□ -0.58
CCDC142-202ENST00000393965 LRRC29Q8WV35 223 aa11.41□□□□□ -0.58
CCDC142-202ENST00000393965 C11orf94C9JXX5 98 aa11.41□□□□□ -0.58
CCDC142-202ENST00000393965 M0R1B8 84 aa11.41□□□□□ -0.58
CCDC142-202ENST00000393965 SLC17A3O00476 420 aa11.41□□□□□ -0.58
CCDC142-202ENST00000393965 CD81P60033 236 aa11.41□□□□□ -0.58
CCDC142-202ENST00000393965 BHLHA15Q7RTS1 189 aaPredicted RBP11.41□□□□□ -0.58
CCDC142-202ENST00000393965 SLC35E3Q7Z769 313 aa11.41□□□□□ -0.58
CCDC142-202ENST00000393965 C1QL4Q86Z23 238 aa11.41□□□□□ -0.58
CCDC142-202ENST00000393965 NPIPB11E5RHQ5 1161 aa11.41□□□□□ -0.58
CCDC142-202ENST00000393965 MYOD1P15172 320 aa11.41□□□□□ -0.58
CCDC142-202ENST00000393965 FOSL1P15407 271 aa11.41□□□□□ -0.58
CCDC142-202ENST00000393965 FOXC1Q12948 553 aa11.41□□□□□ -0.58
CCDC142-202ENST00000393965 ABHD12Q8N2K0 398 aa11.41□□□□□ -0.58
CCDC142-202ENST00000393965 ZNRF1Q8ND25 227 aa11.41□□□□□ -0.58
CCDC142-202ENST00000393965 PINX1Q96BK5 328 aaKnown RBP11.41□□□□□ -0.58
CCDC142-202ENST00000393965 WDR61Q9GZS3 305 aaKnown RBP11.41□□□□□ -0.58
CCDC142-202ENST00000393965 PROCRQ9UNN8 238 aa11.41□□□□□ -0.58
CCDC142-202ENST00000393965 IGLV1-44P01699 117 aa11.4□□□□□ -0.58
CCDC142-202ENST00000393965 RPL23P62829 140 aaKnown RBP11.4□□□□□ -0.58
CCDC142-202ENST00000393965 ASCL5Q7RTU5 278 aa11.4□□□□□ -0.58
CCDC142-202ENST00000393965 LHFPL4Q7Z7J7 247 aa11.4□□□□□ -0.58
CCDC142-202ENST00000393965 Q8IYB0 196 aa11.4□□□□□ -0.58
CCDC142-202ENST00000393965 ZADH2Q8N4Q0 377 aa11.4□□□□□ -0.58
CCDC142-202ENST00000393965 LRFN3Q9BTN0 628 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms