RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 CLEC18CQ8NCF0 446 aa9.95□□□□□ -0.82
SPTBN1-203ENST00000389980 LY6G5BQ8NDX9 201 aa9.95□□□□□ -0.82
SPTBN1-203ENST00000389980 FAM216AQ8WUB2 273 aa9.95□□□□□ -0.82
SPTBN1-203ENST00000389980 SPIN2AQ99865 258 aa9.95□□□□□ -0.82
SPTBN1-203ENST00000389980 SPIN2BQ9BPZ2 258 aa9.95□□□□□ -0.82
SPTBN1-203ENST00000389980 TMEM133Q9H2Q1 129 aa9.95□□□□□ -0.82
SPTBN1-203ENST00000389980 CYTL1Q9NRR1 136 aa9.95□□□□□ -0.82
SPTBN1-203ENST00000389980 RCL1Q9Y2P8 373 aaKnown RBP9.95□□□□□ -0.82
SPTBN1-203ENST00000389980 GCN1Q92616 2671 aaKnown RBP9.94□□□□□ -0.82
SPTBN1-203ENST00000389980 IGHV2-5P01817 119 aa9.94□□□□□ -0.82
SPTBN1-203ENST00000389980 LIPFP07098 398 aa9.94□□□□□ -0.82
SPTBN1-203ENST00000389980 PET100P0DJ07 73 aa9.94□□□□□ -0.82
SPTBN1-203ENST00000389980 NKX2-1P43699 371 aaPredicted RBP9.94□□□□□ -0.82
SPTBN1-203ENST00000389980 ATP5J2P56134 94 aa9.94□□□□□ -0.82
SPTBN1-203ENST00000389980 VKORC1L1Q8N0U8 176 aa9.94□□□□□ -0.82
SPTBN1-203ENST00000389980 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.94□□□□□ -0.82
SPTBN1-203ENST00000389980 OR10X1Q8NGY0 326 aa9.94□□□□□ -0.82
SPTBN1-203ENST00000389980 CLDND2Q8NHS1 167 aa9.94□□□□□ -0.82
SPTBN1-203ENST00000389980 DDB2Q92466 427 aa9.94□□□□□ -0.82
SPTBN1-203ENST00000389980 LSM10Q969L4 123 aaKnown RBP9.94□□□□□ -0.82
SPTBN1-203ENST00000389980 RAB39BQ96DA2 213 aa9.94□□□□□ -0.82
SPTBN1-203ENST00000389980 PERPQ96FX8 193 aa9.94□□□□□ -0.82
SPTBN1-203ENST00000389980 S1PR3Q99500 378 aa9.94□□□□□ -0.82
SPTBN1-203ENST00000389980 GAB2Q9UQC2 676 aa9.94□□□□□ -0.82
SPTBN1-203ENST00000389980 CSMD1Q96PZ7 3565 aa9.94□□□□□ -0.82
SPTBN1-203ENST00000389980 ST8SIA3O43173 380 aa9.94□□□□□ -0.82
SPTBN1-203ENST00000389980 EIF3GO75821 320 aaKnown RBP eCLIP9.94□□□□□ -0.82
SPTBN1-203ENST00000389980 CT45A6P0DMU7 189 aa9.94□□□□□ -0.82
SPTBN1-203ENST00000389980 CT45A5P0DMU8 189 aa9.94□□□□□ -0.82
SPTBN1-203ENST00000389980 CT45A7P0DMV0 189 aa9.94□□□□□ -0.82
SPTBN1-203ENST00000389980 COX7A1P24310 79 aa9.94□□□□□ -0.82
SPTBN1-203ENST00000389980 PDLIM4P50479 330 aa9.94□□□□□ -0.82
SPTBN1-203ENST00000389980 LCN2P80188 198 aa9.94□□□□□ -0.82
SPTBN1-203ENST00000389980 SMCO1Q147U7 214 aa9.94□□□□□ -0.82
SPTBN1-203ENST00000389980 SSX9Q7RTT3 188 aa9.94□□□□□ -0.82
SPTBN1-203ENST00000389980 PUSL1Q8N0Z8 303 aaKnown RBP9.94□□□□□ -0.82
SPTBN1-203ENST00000389980 Q8N7P7 452 aa9.94□□□□□ -0.82
SPTBN1-203ENST00000389980 SIRT7Q9NRC8 400 aa9.94□□□□□ -0.82
SPTBN1-203ENST00000389980 TNCP24821 2201 aa9.93□□□□□ -0.82
SPTBN1-203ENST00000389980 A0A087X0M5 115 aa9.93□□□□□ -0.82
SPTBN1-203ENST00000389980 IGHV2-26A0A0B4J1V2 119 aa9.93□□□□□ -0.82
SPTBN1-203ENST00000389980 TRAV20A0A0B4J274 112 aa9.93□□□□□ -0.82
SPTBN1-203ENST00000389980 A0A1B0GU03 582 aa9.93□□□□□ -0.82
SPTBN1-203ENST00000389980 A0A1B0GX30 115 aa9.93□□□□□ -0.82
SPTBN1-203ENST00000389980 KIAA1324LA8MWY0 1029 aaPredicted RBP9.93□□□□□ -0.82
SPTBN1-203ENST00000389980 J3QKU1 62 aa9.93□□□□□ -0.82
SPTBN1-203ENST00000389980 SSSCA1O60232 199 aa9.93□□□□□ -0.82
SPTBN1-203ENST00000389980 PITX3O75364 302 aa9.93□□□□□ -0.82
SPTBN1-203ENST00000389980 HKR1P10072 659 aa9.93□□□□□ -0.82
SPTBN1-203ENST00000389980 KRTAP10-9P60411 292 aa9.93□□□□□ -0.82
SPTBN1-203ENST00000389980 LMO4P61968 165 aa9.93□□□□□ -0.82
SPTBN1-203ENST00000389980 OR9G1Q8NH87 305 aa9.93□□□□□ -0.82
SPTBN1-203ENST00000389980 SEC11CQ9BY50 192 aa9.93□□□□□ -0.82
SPTBN1-203ENST00000389980 MRPL20Q9BYC9 149 aaKnown RBP9.93□□□□□ -0.82
SPTBN1-203ENST00000389980 SMIM3Q9BZL3 60 aa9.93□□□□□ -0.82
SPTBN1-203ENST00000389980 POMT1Q9Y6A1 747 aa9.93□□□□□ -0.82
SPTBN1-203ENST00000389980 TET2Q6N021 2002 aaPredicted RBP9.92□□□□□ -0.82
SPTBN1-203ENST00000389980 A0A1W2PPH5 198 aa9.92□□□□□ -0.82
SPTBN1-203ENST00000389980 MARCH11A6NNE9 402 aa9.92□□□□□ -0.82
SPTBN1-203ENST00000389980 UBE2CO00762 179 aa9.92□□□□□ -0.82
SPTBN1-203ENST00000389980 THBS3P49746 956 aa9.92□□□□□ -0.82
SPTBN1-203ENST00000389980 ZNF833PQ6ZTB9 187 aa9.92□□□□□ -0.82
SPTBN1-203ENST00000389980 TCTEX1D1Q8N7M0 179 aa9.92□□□□□ -0.82
SPTBN1-203ENST00000389980 TMED6Q8WW62 240 aa9.92□□□□□ -0.82
SPTBN1-203ENST00000389980 FAM168AQ92567 244 aa9.92□□□□□ -0.82
SPTBN1-203ENST00000389980 R3HDM4Q96D70 268 aa9.92□□□□□ -0.82
SPTBN1-203ENST00000389980 BSCL2Q96G97 398 aaPredicted RBP9.92□□□□□ -0.82
SPTBN1-203ENST00000389980 NSG2Q9Y328 171 aa9.92□□□□□ -0.82
SPTBN1-203ENST00000389980 MMP24Q9Y5R2 645 aa9.92□□□□□ -0.82
SPTBN1-203ENST00000389980 HPRT1P00492 218 aa9.92□□□□□ -0.82
SPTBN1-203ENST00000389980 P0C879 139 aa9.92□□□□□ -0.82
SPTBN1-203ENST00000389980 SPP1P10451 314 aa9.92□□□□□ -0.82
SPTBN1-203ENST00000389980 RPL12P30050 165 aaKnown RBP9.92□□□□□ -0.82
SPTBN1-203ENST00000389980 ID3Q02535 119 aa9.92□□□□□ -0.82
SPTBN1-203ENST00000389980 ZNF787Q6DD87 383 aa9.92□□□□□ -0.82
SPTBN1-203ENST00000389980 HIST2H2BCQ6DN03 193 aa9.92□□□□□ -0.82
SPTBN1-203ENST00000389980 LINC00311Q8N616 119 aa9.92□□□□□ -0.82
SPTBN1-203ENST00000389980 NANPQ8TBE9 248 aa9.92□□□□□ -0.82
SPTBN1-203ENST00000389980 ZNF596Q8TC21 504 aa9.92□□□□□ -0.82
SPTBN1-203ENST00000389980 CD300LFQ8TDQ1 290 aa9.92□□□□□ -0.82
SPTBN1-203ENST00000389980 AQP10Q96PS8 301 aa9.92□□□□□ -0.82
SPTBN1-203ENST00000389980 MMP26Q9NRE1 261 aa9.92□□□□□ -0.82
SPTBN1-203ENST00000389980 NAV2Q8IVL1 2488 aa9.91□□□□□ -0.82
SPTBN1-203ENST00000389980 FGF16O43320 207 aa9.91□□□□□ -0.82
SPTBN1-203ENST00000389980 TMEM50AO95807 157 aa9.91□□□□□ -0.82
SPTBN1-203ENST00000389980 IGKV1-16P04430 117 aa9.91□□□□□ -0.82
SPTBN1-203ENST00000389980 CRYBA1P05813 215 aa9.91□□□□□ -0.82
SPTBN1-203ENST00000389980 TPT1P13693 172 aaKnown RBP9.91□□□□□ -0.82
SPTBN1-203ENST00000389980 KLRD1Q13241 179 aa9.91□□□□□ -0.82
SPTBN1-203ENST00000389980 RPL7L1Q6DKI1 246 aaKnown RBP9.91□□□□□ -0.82
SPTBN1-203ENST00000389980 H2BFWTQ7Z2G1 175 aa9.91□□□□□ -0.82
SPTBN1-203ENST00000389980 BAP18Q8IXM2 172 aa9.91□□□□□ -0.82
SPTBN1-203ENST00000389980 PNKDQ8N490 385 aa9.91□□□□□ -0.82
SPTBN1-203ENST00000389980 ST6GALNAC6Q969X2 333 aa9.91□□□□□ -0.82
SPTBN1-203ENST00000389980 PLEKHA2Q9HB19 425 aa9.91□□□□□ -0.82
SPTBN1-203ENST00000389980 LPAR2Q9HBW0 351 aa9.91□□□□□ -0.82
SPTBN1-203ENST00000389980 FAM212BQ9NTI7 297 aaPredicted RBP9.91□□□□□ -0.82
SPTBN1-203ENST00000389980 ZANQ9Y493 2812 aa9.91□□□□□ -0.82
SPTBN1-203ENST00000389980 C5orf52A6NGY3 159 aa9.91□□□□□ -0.82
SPTBN1-203ENST00000389980 E5RGE8 158 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms