RNA–Protein interactions for RNA: ENST00000379472.4

KCNC1-202, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 1 (best) BASIC

Gene KCNC1, Length 7,965 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-202ENST00000379472 FAM3BP58499 235 aaPredicted RBP13.76□□□□□ -0.21
KCNC1-202ENST00000379472 ATOH7Q8N100 152 aa13.76□□□□□ -0.21
KCNC1-202ENST00000379472 TMEM167AQ8TBQ9 72 aa13.76□□□□□ -0.21
KCNC1-202ENST00000379472 CD7P09564 240 aa13.76□□□□□ -0.21
KCNC1-202ENST00000379472 ARL14EPLP0DKL9 152 aa13.76□□□□□ -0.21
KCNC1-202ENST00000379472 SRSF6Q13247 344 aaKnown RBP13.76□□□□□ -0.21
KCNC1-202ENST00000379472 TMEM249Q2WGJ8 235 aa13.76□□□□□ -0.21
KCNC1-202ENST00000379472 A0A087WX48 190 aa13.75□□□□□ -0.21
KCNC1-202ENST00000379472 NEU3Q9UQ49 428 aa13.75□□□□□ -0.21
KCNC1-202ENST00000379472 FER1L5A0AVI2 2057 aa13.75□□□□□ -0.21
KCNC1-202ENST00000379472 SRSF7Q16629 238 aaKnown RBP eCLIP13.75□□□□□ -0.21
KCNC1-202ENST00000379472 MS4A3Q96HJ5 214 aa13.75□□□□□ -0.21
KCNC1-202ENST00000379472 LOC102723996A0A087X1L8 192 aa13.75□□□□□ -0.21
KCNC1-202ENST00000379472 HOXB3P14651 431 aaPredicted RBP13.75□□□□□ -0.21
KCNC1-202ENST00000379472 LURAP1LQ8IV03 231 aa13.75□□□□□ -0.21
KCNC1-202ENST00000379472 C3orf56Q8N813 242 aa13.75□□□□□ -0.21
KCNC1-202ENST00000379472 ZNF414Q96IQ9 312 aa13.75□□□□□ -0.21
KCNC1-202ENST00000379472 LEMD1Q68G75 181 aa13.75□□□□□ -0.21
KCNC1-202ENST00000379472 FAM60AQ9NP50 221 aa13.75□□□□□ -0.21
KCNC1-202ENST00000379472 LAMTOR3Q9UHA4 124 aa13.75□□□□□ -0.21
KCNC1-202ENST00000379472 MIC13Q5XKP0 118 aa13.75□□□□□ -0.21
KCNC1-202ENST00000379472 GATD1Q8NB37 220 aa13.75□□□□□ -0.21
KCNC1-202ENST00000379472 VCX2Q9H322 139 aa13.75□□□□□ -0.21
KCNC1-202ENST00000379472 OR2H2O95918 312 aa13.75□□□□□ -0.21
KCNC1-202ENST00000379472 CYB5R1Q9UHQ9 305 aa13.75□□□□□ -0.21
KCNC1-202ENST00000379472 TRAV8-2A0A0B4J237 113 aa13.74□□□□□ -0.21
KCNC1-202ENST00000379472 PMCHL2Q9BQD1 86 aa13.74□□□□□ -0.21
KCNC1-202ENST00000379472 ST6GALNAC2Q9UJ37 374 aa13.74□□□□□ -0.21
KCNC1-202ENST00000379472 ISXQ2M1V0 245 aa13.74□□□□□ -0.21
KCNC1-202ENST00000379472 TUBGCP6Q96RT7 1819 aa13.74□□□□□ -0.21
KCNC1-202ENST00000379472 IGHV3-11P01762 117 aa13.74□□□□□ -0.21
KCNC1-202ENST00000379472 CTGFP29279 349 aa13.74□□□□□ -0.21
KCNC1-202ENST00000379472 FAM71F2Q6NXP2 309 aa13.74□□□□□ -0.21
KCNC1-202ENST00000379472 TCF23Q7RTU1 214 aa13.74□□□□□ -0.21
KCNC1-202ENST00000379472 ZNF48Q96MX3 618 aaPredicted RBP13.74□□□□□ -0.21
KCNC1-202ENST00000379472 MUC21A0A0G2JKD1 596 aa13.74□□□□□ -0.21
KCNC1-202ENST00000379472 MUC21A0A140T8X8 626 aa13.74□□□□□ -0.21
KCNC1-202ENST00000379472 SMIM18P0DKX4 95 aa13.74□□□□□ -0.21
KCNC1-202ENST00000379472 GPR183P32249 361 aa13.74□□□□□ -0.21
KCNC1-202ENST00000379472 MUC21Q5SSG8 566 aa13.74□□□□□ -0.21
KCNC1-202ENST00000379472 COLCA1Q6ZS62 124 aa13.74□□□□□ -0.21
KCNC1-202ENST00000379472 VKORC1L1Q8N0U8 176 aa13.74□□□□□ -0.21
KCNC1-202ENST00000379472 SFXN3Q9BWM7 321 aa13.74□□□□□ -0.21
KCNC1-202ENST00000379472 SURF2Q15527 256 aaPredicted RBP13.74□□□□□ -0.21
KCNC1-202ENST00000379472 POLR2AP24928 1970 aaKnown RBP13.74□□□□□ -0.21
KCNC1-202ENST00000379472 KCNE1BA0A087WTH5 132 aa13.73□□□□□ -0.21
KCNC1-202ENST00000379472 A0A1B0GWB2 263 aa13.73□□□□□ -0.21
KCNC1-202ENST00000379472 SCAND1P57086 179 aa13.73□□□□□ -0.21
KCNC1-202ENST00000379472 OR11H4Q8NGC9 324 aa13.73□□□□□ -0.21
KCNC1-202ENST00000379472 RPRMQ9NS64 109 aa13.73□□□□□ -0.21
KCNC1-202ENST00000379472 B9A039 149 aa13.73□□□□□ -0.21
KCNC1-202ENST00000379472 HLA-DQA1P01909 254 aa13.73□□□□□ -0.21
KCNC1-202ENST00000379472 HIST1H4AP62805 103 aaKnown RBP13.73□□□□□ -0.21
KCNC1-202ENST00000379472 ICAM4Q14773 271 aa13.73□□□□□ -0.21
KCNC1-202ENST00000379472 LINC00299Q6ZSB3 139 aa13.73□□□□□ -0.21
KCNC1-202ENST00000379472 IGKV1D-33P01593 117 aa13.73□□□□□ -0.21
KCNC1-202ENST00000379472 IGKV1-33P01594 117 aa13.73□□□□□ -0.21
KCNC1-202ENST00000379472 LINC00305Q7Z4B0 112 aa13.73□□□□□ -0.21
KCNC1-202ENST00000379472 RNF182Q8N6D2 247 aa13.73□□□□□ -0.21
KCNC1-202ENST00000379472 ABHD1Q96SE0 405 aa13.73□□□□□ -0.21
KCNC1-202ENST00000379472 GTF3C1Q12789 2109 aa13.73□□□□□ -0.21
KCNC1-202ENST00000379472 A0A0U1RRA0 63 aa13.73□□□□□ -0.21
KCNC1-202ENST00000379472 NPIPB8E9PQR5 432 aa13.73□□□□□ -0.21
KCNC1-202ENST00000379472 NPIPB9F8W1W9 429 aa13.73□□□□□ -0.21
KCNC1-202ENST00000379472 NPIPB7O75200 414 aa13.73□□□□□ -0.21
KCNC1-202ENST00000379472 DUSP15Q9H1R2 295 aaPredicted RBP13.73□□□□□ -0.21
KCNC1-202ENST00000379472 ZNF107Q9UII5 783 aaPredicted RBP13.73□□□□□ -0.21
KCNC1-202ENST00000379472 CEACAM21Q3KPI0 293 aa13.73□□□□□ -0.21
KCNC1-202ENST00000379472 MT-ND6P03923 174 aa13.73□□□□□ -0.21
KCNC1-202ENST00000379472 UBE2V2Q15819 145 aa13.73□□□□□ -0.21
KCNC1-202ENST00000379472 ZNF562Q6V9R5 426 aa13.73□□□□□ -0.21
KCNC1-202ENST00000379472 IGLV3-27P01718 113 aa13.73□□□□□ -0.21
KCNC1-202ENST00000379472 RARRES2Q99969 163 aa13.73□□□□□ -0.21
KCNC1-202ENST00000379472 IL6RP08887 468 aaPredicted RBP13.72□□□□□ -0.21
KCNC1-202ENST00000379472 APOBEC3AP31941 199 aaPredicted RBP13.72□□□□□ -0.21
KCNC1-202ENST00000379472 DRD3P35462 400 aa13.72□□□□□ -0.21
KCNC1-202ENST00000379472 PPP1R27Q86WC6 154 aa13.72□□□□□ -0.21
KCNC1-202ENST00000379472 OR9G1Q8NH87 305 aa13.72□□□□□ -0.21
KCNC1-202ENST00000379472 PRADC1Q9BSG0 188 aa13.72□□□□□ -0.21
KCNC1-202ENST00000379472 MOSP00540 346 aa13.72□□□□□ -0.21
KCNC1-202ENST00000379472 ATP6V0CP27449 155 aa13.72□□□□□ -0.21
KCNC1-202ENST00000379472 MEF2BQ02080 365 aaPredicted RBP13.72□□□□□ -0.21
KCNC1-202ENST00000379472 SPNS2Q8IVW8 549 aa13.72□□□□□ -0.21
KCNC1-202ENST00000379472 FBXL7Q9UJT9 491 aa13.72□□□□□ -0.21
KCNC1-202ENST00000379472 PGFP49763 221 aa13.72□□□□□ -0.21
KCNC1-202ENST00000379472 MRM2Q9UI43 246 aaKnown RBP13.72□□□□□ -0.21
KCNC1-202ENST00000379472 CHST5Q9GZS9 411 aa13.72□□□□□ -0.21
KCNC1-202ENST00000379472 SSC5DA1L4H1 1573 aa13.72□□□□□ -0.21
KCNC1-202ENST00000379472 PAX1P15863 534 aa13.72□□□□□ -0.21
KCNC1-202ENST00000379472 ZNF385CQ66K41 422 aaPredicted RBP13.72□□□□□ -0.21
KCNC1-202ENST00000379472 TMEFF2Q9UIK5 374 aaPredicted RBP13.72□□□□□ -0.21
KCNC1-202ENST00000379472 SRIP30626 198 aa13.72□□□□□ -0.21
KCNC1-202ENST00000379472 FLRT3Q9NZU0 649 aa13.72□□□□□ -0.21
KCNC1-202ENST00000379472 FOXA2Q9Y261 457 aaPredicted RBP13.72□□□□□ -0.21
KCNC1-202ENST00000379472 SAP30O75446 220 aa13.71□□□□□ -0.21
KCNC1-202ENST00000379472 HSPB1P04792 205 aaKnown RBP13.71□□□□□ -0.21
KCNC1-202ENST00000379472 PRSS22Q9GZN4 317 aa13.71□□□□□ -0.21
KCNC1-202ENST00000379472 C7orf77A4D0Y5 90 aa13.71□□□□□ -0.21
KCNC1-202ENST00000379472 TOMM40O96008 361 aa13.71□□□□□ -0.21
KCNC1-202ENST00000379472 KCNK7Q9Y2U2 307 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms