RNA–Protein interactions for RNA: ENST00000373489.9

PBX3-204, Transcript of PBX homeobox 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PBX3, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-204ENST00000373489 TSPOP30536 169 aa13.44□□□□□ -0.26
PBX3-204ENST00000373489 ZNF83P51522 516 aa13.44□□□□□ -0.26
PBX3-204ENST00000373489 GFRA1P56159 465 aa13.44□□□□□ -0.26
PBX3-204ENST00000373489 GTF3C1Q12789 2109 aa13.44□□□□□ -0.26
PBX3-204ENST00000373489 SAP25Q8TEE9 199 aa13.44□□□□□ -0.26
PBX3-204ENST00000373489 VPS25Q9BRG1 176 aa13.44□□□□□ -0.26
PBX3-204ENST00000373489 DUSP23Q9BVJ7 150 aa13.44□□□□□ -0.26
PBX3-204ENST00000373489 DLL3Q9NYJ7 618 aa13.44□□□□□ -0.26
PBX3-204ENST00000373489 HSPB7Q9UBY9 170 aa13.44□□□□□ -0.26
PBX3-204ENST00000373489 LOC102724200A0A096LPH7 203 aaPredicted RBP13.43□□□□□ -0.26
PBX3-204ENST00000373489 LY6G6EA0A0G2JKS1 128 aa13.43□□□□□ -0.26
PBX3-204ENST00000373489 C17orf112F2Z3M2 114 aa13.43□□□□□ -0.26
PBX3-204ENST00000373489 TCL1AP56279 114 aa13.43□□□□□ -0.26
PBX3-204ENST00000373489 BPIFB3P59826 476 aa13.43□□□□□ -0.26
PBX3-204ENST00000373489 MMD2Q8IY49 270 aa13.43□□□□□ -0.26
PBX3-204ENST00000373489 BET1LQ9NYM9 111 aa13.43□□□□□ -0.26
PBX3-204ENST00000373489 TP73-AS1Q9UF72 201 aa13.43□□□□□ -0.26
PBX3-204ENST00000373489 ZNF391Q9UJN7 358 aa13.43□□□□□ -0.26
PBX3-204ENST00000373489 TRAPPC2LQ9UL33 140 aa13.43□□□□□ -0.26
PBX3-204ENST00000373489 U3KQA8 63 aa13.43□□□□□ -0.26
PBX3-204ENST00000373489 A0A096LPE4 126 aa13.43□□□□□ -0.26
PBX3-204ENST00000373489 PIGBOS1A0A0B4J2F0 54 aa13.43□□□□□ -0.26
PBX3-204ENST00000373489 IGHV3-64DA0A0J9YX35 117 aa13.43□□□□□ -0.26
PBX3-204ENST00000373489 A0A1W2PPZ6 126 aa13.43□□□□□ -0.26
PBX3-204ENST00000373489 RRHO14718 337 aa13.43□□□□□ -0.26
PBX3-204ENST00000373489 LGALS4P56470 323 aa13.43□□□□□ -0.26
PBX3-204ENST00000373489 LINC00205P59089 165 aa13.43□□□□□ -0.26
PBX3-204ENST00000373489 LOXL4Q96JB6 756 aa13.43□□□□□ -0.26
PBX3-204ENST00000373489 BDP1A6H8Y1 2624 aa13.43□□□□□ -0.26
PBX3-204ENST00000373489 DEGS1O15121 323 aa13.43□□□□□ -0.26
PBX3-204ENST00000373489 CLDN14O95500 239 aa13.43□□□□□ -0.26
PBX3-204ENST00000373489 VAMP3Q15836 100 aa13.43□□□□□ -0.26
PBX3-204ENST00000373489 LRRC30A6NM36 301 aa13.42□□□□□ -0.26
PBX3-204ENST00000373489 DKK1O94907 266 aa13.42□□□□□ -0.26
PBX3-204ENST00000373489 RPL30P62888 115 aaKnown RBP13.42□□□□□ -0.26
PBX3-204ENST00000373489 RPL31P62899 125 aaKnown RBP13.42□□□□□ -0.26
PBX3-204ENST00000373489 MRPL21Q7Z2W9 205 aaKnown RBP13.42□□□□□ -0.26
PBX3-204ENST00000373489 YRDCQ86U90 279 aaKnown RBP13.42□□□□□ -0.26
PBX3-204ENST00000373489 FREM2Q5SZK8 3169 aa13.42□□□□□ -0.26
PBX3-204ENST00000373489 RHBDL1O75783 438 aa13.42□□□□□ -0.26
PBX3-204ENST00000373489 S1PR2O95136 353 aa13.42□□□□□ -0.26
PBX3-204ENST00000373489 TOMM40O96008 361 aa13.42□□□□□ -0.26
PBX3-204ENST00000373489 FKBP2P26885 142 aaKnown RBP13.42□□□□□ -0.26
PBX3-204ENST00000373489 CEACAM21Q3KPI0 293 aa13.42□□□□□ -0.26
PBX3-204ENST00000373489 KRTAP27-1Q3LI81 207 aa13.42□□□□□ -0.26
PBX3-204ENST00000373489 OR2M7Q8NG81 312 aa13.42□□□□□ -0.26
PBX3-204ENST00000373489 CPT1CQ8TCG5 803 aa13.42□□□□□ -0.26
PBX3-204ENST00000373489 YTHDF2Q9Y5A9 579 aaKnown RBP13.42□□□□□ -0.26
PBX3-204ENST00000373489 FREM1Q5H8C1 2179 aa13.41□□□□□ -0.26
PBX3-204ENST00000373489 NCOR1O75376 2440 aa13.41□□□□□ -0.26
PBX3-204ENST00000373489 IGHV2OR16-5A0A0B4J2B6 119 aa13.41□□□□□ -0.26
PBX3-204ENST00000373489 C5orf49A4QMS7 147 aa13.41□□□□□ -0.26
PBX3-204ENST00000373489 FAM90A26D6RGX4 464 aa13.41□□□□□ -0.26
PBX3-204ENST00000373489 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.41□□□□□ -0.26
PBX3-204ENST00000373489 CA6P23280 308 aa13.41□□□□□ -0.26
PBX3-204ENST00000373489 SRIP30626 198 aa13.41□□□□□ -0.26
PBX3-204ENST00000373489 RPEL1Q2QD12 228 aa13.41□□□□□ -0.26
PBX3-204ENST00000373489 VHLLQ6RSH7 139 aa13.41□□□□□ -0.26
PBX3-204ENST00000373489 Q8N7P7 452 aa13.41□□□□□ -0.26
PBX3-204ENST00000373489 NGFP01138 241 aa13.41□□□□□ -0.26
PBX3-204ENST00000373489 FXYD3Q14802 87 aa13.41□□□□□ -0.26
PBX3-204ENST00000373489 TRIP6Q15654 476 aaKnown RBP13.41□□□□□ -0.26
PBX3-204ENST00000373489 TCTEX1D1Q8N7M0 179 aa13.41□□□□□ -0.26
PBX3-204ENST00000373489 KCNS1Q96KK3 526 aa13.41□□□□□ -0.26
PBX3-204ENST00000373489 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.41□□□□□ -0.26
PBX3-204ENST00000373489 SLC35D1Q9NTN3 355 aa13.41□□□□□ -0.26
PBX3-204ENST00000373489 OCIAD1Q9NX40 245 aa13.41□□□□□ -0.26
PBX3-204ENST00000373489 C19orf25Q9UFG5 118 aaPredicted RBP13.41□□□□□ -0.26
PBX3-204ENST00000373489 CXCL13O43927 109 aa13.4□□□□□ -0.26
PBX3-204ENST00000373489 OTX2P32243 289 aa13.4□□□□□ -0.26
PBX3-204ENST00000373489 NIT1Q86X76 327 aa13.4□□□□□ -0.26
PBX3-204ENST00000373489 KLHDC1Q8N7A1 406 aa13.4□□□□□ -0.26
PBX3-204ENST00000373489 C1QTNF5Q9BXJ0 243 aa13.4□□□□□ -0.26
PBX3-204ENST00000373489 LRP5LA4QPB2 252 aa13.4□□□□□ -0.26
PBX3-204ENST00000373489 PRRX1P54821 245 aa13.4□□□□□ -0.26
PBX3-204ENST00000373489 RELBQ01201 579 aa13.4□□□□□ -0.26
PBX3-204ENST00000373489 LDLRAD2Q5SZI1 272 aa13.4□□□□□ -0.26
PBX3-204ENST00000373489 MIC13Q5XKP0 118 aa13.4□□□□□ -0.26
PBX3-204ENST00000373489 MRPL54Q6P161 138 aaKnown RBP13.4□□□□□ -0.26
PBX3-204ENST00000373489 FAM58AQ8N1B3 248 aa13.4□□□□□ -0.26
PBX3-204ENST00000373489 SPSB4Q96A44 273 aa13.4□□□□□ -0.26
PBX3-204ENST00000373489 GMPPAQ96IJ6 420 aaPredicted RBP13.4□□□□□ -0.26
PBX3-204ENST00000373489 DOCK7Q96N67 2140 aa13.4□□□□□ -0.27
PBX3-204ENST00000373489 ZNF324O75467 553 aaPredicted RBP13.39□□□□□ -0.27
PBX3-204ENST00000373489 LIFP15018 202 aa13.39□□□□□ -0.27
PBX3-204ENST00000373489 CD1BP29016 333 aa13.39□□□□□ -0.27
PBX3-204ENST00000373489 ASPHD1Q5U4P2 390 aa13.39□□□□□ -0.27
PBX3-204ENST00000373489 ST6GALNAC6Q969X2 333 aa13.39□□□□□ -0.27
PBX3-204ENST00000373489 BORCS7Q96B45 105 aa13.39□□□□□ -0.27
PBX3-204ENST00000373489 TNRC6BQ9UPQ9 1833 aaKnown RBP13.39□□□□□ -0.27
PBX3-204ENST00000373489 IGHV2-70DA0A0C4DH43 119 aa13.39□□□□□ -0.27
PBX3-204ENST00000373489 C17orf98A8MV24 154 aa13.39□□□□□ -0.27
PBX3-204ENST00000373489 A8MXE2 369 aa13.39□□□□□ -0.27
PBX3-204ENST00000373489 CA2P00918 260 aa13.39□□□□□ -0.27
PBX3-204ENST00000373489 PCBD1P61457 104 aa13.39□□□□□ -0.27
PBX3-204ENST00000373489 PEAR1Q5VY43 1037 aaPredicted RBP13.39□□□□□ -0.27
PBX3-204ENST00000373489 MRPL14Q6P1L8 145 aaKnown RBP13.39□□□□□ -0.27
PBX3-204ENST00000373489 CLEC7AQ9BXN2 247 aa13.39□□□□□ -0.27
PBX3-204ENST00000373489 RNASE7Q9H1E1 156 aaKnown RBP13.39□□□□□ -0.27
PBX3-204ENST00000373489 OR2D2Q9H210 308 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms