RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 A0A1W2PRM7 423 aa13.57□□□□□ -0.24
COL17A1-202ENST00000369733 C21orf140B9A014 251 aa13.57□□□□□ -0.24
COL17A1-202ENST00000369733 OR8B2Q96RD0 313 aa13.57□□□□□ -0.24
COL17A1-202ENST00000369733 NABP2Q9BQ15 211 aa13.57□□□□□ -0.24
COL17A1-202ENST00000369733 SLC25A10Q9UBX3 287 aaPredicted RBP13.57□□□□□ -0.24
COL17A1-202ENST00000369733 KLF7O75840 302 aaPredicted RBP13.57□□□□□ -0.24
COL17A1-202ENST00000369733 COX5BP10606 129 aa13.57□□□□□ -0.24
COL17A1-202ENST00000369733 KIR2DL2P43627 348 aaPredicted RBP13.57□□□□□ -0.24
COL17A1-202ENST00000369733 C14orf144Q96I85 54 aa13.57□□□□□ -0.24
COL17A1-202ENST00000369733 hCG_38984A0A1B0GV85 526 aa13.57□□□□□ -0.24
COL17A1-202ENST00000369733 FOXD3Q9UJU5 478 aaPredicted RBP13.57□□□□□ -0.24
COL17A1-202ENST00000369733 ATP5G3P48201 142 aa13.56□□□□□ -0.24
COL17A1-202ENST00000369733 OR5P3Q8WZ94 311 aa13.56□□□□□ -0.24
COL17A1-202ENST00000369733 GRAMD2BQ96HH9 432 aa13.56□□□□□ -0.24
COL17A1-202ENST00000369733 ALPK2Q86TB3 2170 aa13.56□□□□□ -0.24
COL17A1-202ENST00000369733 ODAMA1E959 279 aa13.56□□□□□ -0.24
COL17A1-202ENST00000369733 RPL8P62917 257 aaKnown RBP13.56□□□□□ -0.24
COL17A1-202ENST00000369733 CACNA1IQ9P0X4 2223 aa13.56□□□□□ -0.24
COL17A1-202ENST00000369733 A0A0A6YYD4 124 aa13.56□□□□□ -0.24
COL17A1-202ENST00000369733 GOSR1O95249 250 aa13.56□□□□□ -0.24
COL17A1-202ENST00000369733 CCL13Q99616 98 aa13.56□□□□□ -0.24
COL17A1-202ENST00000369733 HSPB7Q9UBY9 170 aa13.56□□□□□ -0.24
COL17A1-202ENST00000369733 GBF1Q92538 1859 aa13.56□□□□□ -0.24
COL17A1-202ENST00000369733 SYNGR3O43761 229 aa13.56□□□□□ -0.24
COL17A1-202ENST00000369733 ZNF124Q15973 351 aa13.56□□□□□ -0.24
COL17A1-202ENST00000369733 ZNF841Q6ZN19 808 aa13.56□□□□□ -0.24
COL17A1-202ENST00000369733 ASCL5Q7RTU5 278 aa13.56□□□□□ -0.24
COL17A1-202ENST00000369733 SFXN3Q9BWM7 321 aa13.56□□□□□ -0.24
COL17A1-202ENST00000369733 SCO2A0A1W2PP80 73 aa13.55□□□□□ -0.24
COL17A1-202ENST00000369733 RRHO14718 337 aa13.55□□□□□ -0.24
COL17A1-202ENST00000369733 IL6RP08887 468 aaPredicted RBP13.55□□□□□ -0.24
COL17A1-202ENST00000369733 GCSHP23434 173 aa13.55□□□□□ -0.24
COL17A1-202ENST00000369733 JOSD1Q15040 202 aaPredicted RBP13.55□□□□□ -0.24
COL17A1-202ENST00000369733 HIST3H2BBQ8N257 126 aa13.55□□□□□ -0.24
COL17A1-202ENST00000369733 HIST1H2BLQ99880 126 aa13.55□□□□□ -0.24
COL17A1-202ENST00000369733 J3KRW8 73 aa13.55□□□□□ -0.24
COL17A1-202ENST00000369733 DNLZQ5SXM8 178 aa13.55□□□□□ -0.24
COL17A1-202ENST00000369733 CALHM1Q8IU99 346 aa13.55□□□□□ -0.24
COL17A1-202ENST00000369733 GUCD1Q96NT3 240 aa13.55□□□□□ -0.24
COL17A1-202ENST00000369733 RTN4RQ9BZR6 473 aa13.55□□□□□ -0.24
COL17A1-202ENST00000369733 M0QZ24 198 aa13.55□□□□□ -0.24
COL17A1-202ENST00000369733 CKS2P33552 79 aa13.55□□□□□ -0.24
COL17A1-202ENST00000369733 ZNF788Q6ZQV5 615 aa13.55□□□□□ -0.24
COL17A1-202ENST00000369733 NEU1Q99519 415 aa13.55□□□□□ -0.24
COL17A1-202ENST00000369733 CALYQ9NYX4 217 aa13.55□□□□□ -0.24
COL17A1-202ENST00000369733 RND2P52198 227 aa13.55□□□□□ -0.24
COL17A1-202ENST00000369733 SMRP1Q8NCR6 262 aa13.55□□□□□ -0.24
COL17A1-202ENST00000369733 CDX2Q99626 313 aaPredicted RBP13.55□□□□□ -0.24
COL17A1-202ENST00000369733 TMEM70Q9BUB7 260 aa13.55□□□□□ -0.24
COL17A1-202ENST00000369733 C19orf24Q9BVV8 132 aa13.55□□□□□ -0.24
COL17A1-202ENST00000369733 SCNM1Q9BWG6 230 aa13.55□□□□□ -0.24
COL17A1-202ENST00000369733 SCN10AQ9Y5Y9 1956 aa13.55□□□□□ -0.24
COL17A1-202ENST00000369733 IGKV3D-11A0A0A0MRZ8 115 aa13.54□□□□□ -0.24
COL17A1-202ENST00000369733 PROB1E7EW31 1015 aa13.54□□□□□ -0.24
COL17A1-202ENST00000369733 CXCL1P09341 107 aa13.54□□□□□ -0.24
COL17A1-202ENST00000369733 ERVFRD-1P60508 538 aa13.54□□□□□ -0.24
COL17A1-202ENST00000369733 GFI1BQ5VTD9 330 aa13.54□□□□□ -0.24
COL17A1-202ENST00000369733 HCP5Q6MZN7 132 aa13.54□□□□□ -0.24
COL17A1-202ENST00000369733 SLC25A45Q8N413 288 aa13.54□□□□□ -0.24
COL17A1-202ENST00000369733 SGK494Q96LW2 274 aa13.54□□□□□ -0.24
COL17A1-202ENST00000369733 CLEC1BQ9P126 229 aa13.54□□□□□ -0.24
COL17A1-202ENST00000369733 RPL27AP46776 148 aaKnown RBP13.54□□□□□ -0.24
COL17A1-202ENST00000369733 LGALS7P47929 136 aa13.54□□□□□ -0.24
COL17A1-202ENST00000369733 TNFSF10P50591 281 aa13.54□□□□□ -0.24
COL17A1-202ENST00000369733 TNFRSF19Q9NS68 423 aa13.54□□□□□ -0.24
COL17A1-202ENST00000369733 JPT1Q9UK76 154 aa13.54□□□□□ -0.24
COL17A1-202ENST00000369733 TRBV6-7A0A0A0MS04 114 aa13.54□□□□□ -0.24
COL17A1-202ENST00000369733 MGPP08493 103 aa13.54□□□□□ -0.24
COL17A1-202ENST00000369733 C1QL4Q86Z23 238 aa13.54□□□□□ -0.24
COL17A1-202ENST00000369733 KCNS1Q96KK3 526 aa13.54□□□□□ -0.24
COL17A1-202ENST00000369733 RALYQ9UKM9 306 aaKnown RBP13.54□□□□□ -0.24
COL17A1-202ENST00000369733 IGKV1-9A0A0C4DH69 117 aa13.54□□□□□ -0.24
COL17A1-202ENST00000369733 ZNF714Q96N38 554 aa13.54□□□□□ -0.24
COL17A1-202ENST00000369733 MAP1BP46821 2468 aaKnown RBP13.54□□□□□ -0.24
COL17A1-202ENST00000369733 GREB1Q4ZG55 1949 aa13.54□□□□□ -0.24
COL17A1-202ENST00000369733 OR10AG1Q8NH19 301 aa13.53□□□□□ -0.24
COL17A1-202ENST00000369733 HS3ST3B1Q9Y662 390 aa13.53□□□□□ -0.24
COL17A1-202ENST00000369733 FAM89BQ8N5H3 189 aa13.53□□□□□ -0.24
COL17A1-202ENST00000369733 GDF15Q99988 308 aa13.53□□□□□ -0.24
COL17A1-202ENST00000369733 MST1P26927 711 aa13.53□□□□□ -0.24
COL17A1-202ENST00000369733 C1orf174Q8IYL3 243 aa13.53□□□□□ -0.24
COL17A1-202ENST00000369733 PMCHL2Q9BQD1 86 aa13.53□□□□□ -0.24
COL17A1-202ENST00000369733 MRPL32Q9BYC8 188 aaKnown RBP13.53□□□□□ -0.24
COL17A1-202ENST00000369733 LEAP2Q969E1 77 aa13.53□□□□□ -0.24
COL17A1-202ENST00000369733 SERF1AO75920 110 aa13.53□□□□□ -0.24
COL17A1-202ENST00000369733 COX6A1P12074 109 aa13.53□□□□□ -0.24
COL17A1-202ENST00000369733 BMI1P35226 326 aa13.53□□□□□ -0.24
COL17A1-202ENST00000369733 PCOLCEQ15113 449 aa13.53□□□□□ -0.24
COL17A1-202ENST00000369733 MAJINQ3KP22 176 aa13.53□□□□□ -0.24
COL17A1-202ENST00000369733 SPANXN1Q5VSR9 72 aa13.53□□□□□ -0.24
COL17A1-202ENST00000369733 OPN3Q9H1Y3 402 aaPredicted RBP13.53□□□□□ -0.24
COL17A1-202ENST00000369733 PEF1Q9UBV8 284 aaKnown RBP13.53□□□□□ -0.24
COL17A1-202ENST00000369733 LOC285556D6RIA3 1793 aa13.52□□□□□ -0.24
COL17A1-202ENST00000369733 CGAP01215 116 aa13.52□□□□□ -0.24
COL17A1-202ENST00000369733 PTGDSP41222 190 aa13.52□□□□□ -0.24
COL17A1-202ENST00000369733 TCF23Q7RTU1 214 aa13.52□□□□□ -0.24
COL17A1-202ENST00000369733 SRSF12Q8WXF0 261 aaKnown RBP13.52□□□□□ -0.24
COL17A1-202ENST00000369733 RP1P56715 2156 aa13.52□□□□□ -0.24
COL17A1-202ENST00000369733 HBBP68871 147 aa13.52□□□□□ -0.24
COL17A1-202ENST00000369733 MMDQ15546 238 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms