RNA–Protein interactions for RNA: ENST00000369096.8

PRDM1-203, Transcript of PR/SET domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM1, Length 5,164 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-203ENST00000369096 ODAMA1E959 279 aa13.55□□□□□ -0.24
PRDM1-203ENST00000369096 FOXI3A8MTJ6 420 aaPredicted RBP13.55□□□□□ -0.24
PRDM1-203ENST00000369096 PGLYRP1O75594 196 aaPredicted RBP13.55□□□□□ -0.24
PRDM1-203ENST00000369096 LCN2P80188 198 aa13.55□□□□□ -0.24
PRDM1-203ENST00000369096 CALYQ9NYX4 217 aa13.55□□□□□ -0.24
PRDM1-203ENST00000369096 TOMM7Q9P0U1 55 aa13.55□□□□□ -0.24
PRDM1-203ENST00000369096 PEF1Q9UBV8 284 aaKnown RBP13.55□□□□□ -0.24
PRDM1-203ENST00000369096 ZG16O60844 167 aa13.54□□□□□ -0.24
PRDM1-203ENST00000369096 ATP5G2Q06055 141 aa13.54□□□□□ -0.24
PRDM1-203ENST00000369096 DNM1P46Q6ZS02 220 aa13.54□□□□□ -0.24
PRDM1-203ENST00000369096 SSC5DA1L4H1 1573 aa13.54□□□□□ -0.24
PRDM1-203ENST00000369096 COL11A1P12107 1806 aaPredicted RBP13.54□□□□□ -0.24
PRDM1-203ENST00000369096 A0A1W2PQM1 296 aa13.54□□□□□ -0.24
PRDM1-203ENST00000369096 CA7P43166 264 aa13.54□□□□□ -0.24
PRDM1-203ENST00000369096 FOXL2P58012 376 aa13.54□□□□□ -0.24
PRDM1-203ENST00000369096 SNRPD3P62318 126 aaKnown RBP13.54□□□□□ -0.24
PRDM1-203ENST00000369096 NPFFR1Q9GZQ6 430 aa13.54□□□□□ -0.24
PRDM1-203ENST00000369096 CEP250Q9BV73 2442 aa13.54□□□□□ -0.24
PRDM1-203ENST00000369096 CXorf65A6NEN9 183 aa13.54□□□□□ -0.24
PRDM1-203ENST00000369096 BEND2Q8NDZ0 799 aa13.54□□□□□ -0.24
PRDM1-203ENST00000369096 DNASE2BQ8WZ79 361 aa13.54□□□□□ -0.24
PRDM1-203ENST00000369096 PPP1R3EQ9H7J1 279 aa13.54□□□□□ -0.24
PRDM1-203ENST00000369096 HLA-DQB1P01920 261 aa13.54□□□□□ -0.24
PRDM1-203ENST00000369096 HOXD4P09016 255 aaPredicted RBP13.54□□□□□ -0.24
PRDM1-203ENST00000369096 PMCHL2Q9BQD1 86 aa13.54□□□□□ -0.24
PRDM1-203ENST00000369096 WDR54Q9H977 334 aa13.54□□□□□ -0.24
PRDM1-203ENST00000369096 YBX2Q9Y2T7 364 aaKnown RBP13.54□□□□□ -0.24
PRDM1-203ENST00000369096 MARCH11A6NNE9 402 aa13.53□□□□□ -0.24
PRDM1-203ENST00000369096 TMEM250H0YL14 139 aa13.53□□□□□ -0.24
PRDM1-203ENST00000369096 DSPPQ9NZW4 1301 aa13.53□□□□□ -0.24
PRDM1-203ENST00000369096 A0A1B0GV90 55 aa13.53□□□□□ -0.24
PRDM1-203ENST00000369096 CFDP00746 253 aaPredicted RBP13.53□□□□□ -0.24
PRDM1-203ENST00000369096 FOXJ2Q9P0K8 574 aa13.53□□□□□ -0.24
PRDM1-203ENST00000369096 ESPL1Q14674 2120 aa13.53□□□□□ -0.24
PRDM1-203ENST00000369096 NPIPB4C9JG80 1138 aa13.53□□□□□ -0.24
PRDM1-203ENST00000369096 PCSK4Q6UW60 755 aa13.53□□□□□ -0.24
PRDM1-203ENST00000369096 ABHD12Q8N2K0 398 aa13.53□□□□□ -0.24
PRDM1-203ENST00000369096 C10orf111Q8N326 155 aa13.53□□□□□ -0.24
PRDM1-203ENST00000369096 APCDD1LQ8NCL9 501 aa13.53□□□□□ -0.24
PRDM1-203ENST00000369096 NPIPB3Q92617 1050 aa13.53□□□□□ -0.24
PRDM1-203ENST00000369096 TMEM101Q96IK0 257 aa13.53□□□□□ -0.24
PRDM1-203ENST00000369096 DCTN5Q9BTE1 182 aa13.53□□□□□ -0.24
PRDM1-203ENST00000369096 NCOR1O75376 2440 aa13.53□□□□□ -0.24
PRDM1-203ENST00000369096 CENPVL1A0A0U1RR11 272 aa13.53□□□□□ -0.24
PRDM1-203ENST00000369096 M0R381 172 aa13.53□□□□□ -0.24
PRDM1-203ENST00000369096 SFTPCP11686 197 aa13.53□□□□□ -0.24
PRDM1-203ENST00000369096 CTAG1AP78358 180 aa13.53□□□□□ -0.24
PRDM1-203ENST00000369096 LEAP2Q969E1 77 aa13.53□□□□□ -0.24
PRDM1-203ENST00000369096 IDI2-AS1Q9NZ38 188 aa13.53□□□□□ -0.24
PRDM1-203ENST00000369096 TRBV5-3A0A0A0MS03 114 aa13.52□□□□□ -0.24
PRDM1-203ENST00000369096 TRAV24A0A0B4J272 114 aa13.52□□□□□ -0.24
PRDM1-203ENST00000369096 PPIAL4CA0A0B4J2A2 164 aa13.52□□□□□ -0.24
PRDM1-203ENST00000369096 PPIAL4GP0DN37 164 aa13.52□□□□□ -0.24
PRDM1-203ENST00000369096 TMEM52Q8NDY8 209 aa13.52□□□□□ -0.24
PRDM1-203ENST00000369096 SNAI2O43623 268 aa13.52□□□□□ -0.24
PRDM1-203ENST00000369096 TNFRSF9Q07011 255 aa13.52□□□□□ -0.24
PRDM1-203ENST00000369096 ZNF600Q6ZNG1 722 aa13.52□□□□□ -0.24
PRDM1-203ENST00000369096 CENPVQ7Z7K6 275 aaPredicted RBP13.52□□□□□ -0.24
PRDM1-203ENST00000369096 RFLNBQ8N5W9 214 aa13.52□□□□□ -0.24
PRDM1-203ENST00000369096 TEX29Q8N6K0 151 aa13.52□□□□□ -0.24
PRDM1-203ENST00000369096 NABP2Q9BQ15 211 aa13.52□□□□□ -0.24
PRDM1-203ENST00000369096 TCF19Q9Y242 345 aa13.52□□□□□ -0.24
PRDM1-203ENST00000369096 TNFRSF18Q9Y5U5 241 aa13.52□□□□□ -0.24
PRDM1-203ENST00000369096 TRBV7-9A0A0J9YWB2 115 aa13.52□□□□□ -0.25
PRDM1-203ENST00000369096 PTP4A3O75365 173 aa13.52□□□□□ -0.25
PRDM1-203ENST00000369096 TGFAP01135 160 aa13.52□□□□□ -0.25
PRDM1-203ENST00000369096 PF4P02776 101 aa13.52□□□□□ -0.25
PRDM1-203ENST00000369096 LIPFP07098 398 aa13.52□□□□□ -0.25
PRDM1-203ENST00000369096 CD1AP06126 327 aa13.52□□□□□ -0.25
PRDM1-203ENST00000369096 EGR1P18146 543 aa13.52□□□□□ -0.25
PRDM1-203ENST00000369096 ALKBH7Q9BT30 221 aaPredicted RBP13.52□□□□□ -0.25
PRDM1-203ENST00000369096 PLAC1Q9HBJ0 212 aa13.52□□□□□ -0.25
PRDM1-203ENST00000369096 MDC1Q14676 2089 aaKnown RBP13.52□□□□□ -0.25
PRDM1-203ENST00000369096 RRHO14718 337 aa13.51□□□□□ -0.25
PRDM1-203ENST00000369096 FSTP19883 344 aa13.51□□□□□ -0.25
PRDM1-203ENST00000369096 IL11P20809 199 aa13.51□□□□□ -0.25
PRDM1-203ENST00000369096 BHLHA9Q7RTU4 235 aa13.51□□□□□ -0.25
PRDM1-203ENST00000369096 DLL3Q9NYJ7 618 aa13.51□□□□□ -0.25
PRDM1-203ENST00000369096 DPRXA6NFQ7 191 aa13.51□□□□□ -0.25
PRDM1-203ENST00000369096 FAM90A26D6RGX4 464 aa13.51□□□□□ -0.25
PRDM1-203ENST00000369096 FOXS1O43638 330 aa13.51□□□□□ -0.25
PRDM1-203ENST00000369096 NDUFA2O43678 99 aa13.51□□□□□ -0.25
PRDM1-203ENST00000369096 APOMO95445 188 aa13.51□□□□□ -0.25
PRDM1-203ENST00000369096 CBLN1P23435 193 aa13.51□□□□□ -0.25
PRDM1-203ENST00000369096 UCNP55089 124 aa13.51□□□□□ -0.25
PRDM1-203ENST00000369096 MBD1Q9UIS9 605 aaPredicted RBP13.51□□□□□ -0.25
PRDM1-203ENST00000369096 TNS1Q9HBL0 1735 aaKnown RBP13.51□□□□□ -0.25
PRDM1-203ENST00000369096 ARID2Q68CP9 1835 aa13.51□□□□□ -0.25
PRDM1-203ENST00000369096 ZNF721Q8TF20 911 aa13.51□□□□□ -0.25
PRDM1-203ENST00000369096 ATXN7O15265 892 aaPredicted RBP13.51□□□□□ -0.25
PRDM1-203ENST00000369096 SPINT1O43278 529 aa13.51□□□□□ -0.25
PRDM1-203ENST00000369096 DXOO77932 396 aaKnown RBP13.51□□□□□ -0.25
PRDM1-203ENST00000369096 HBBP68871 147 aa13.51□□□□□ -0.25
PRDM1-203ENST00000369096 PEAR1Q5VY43 1037 aaPredicted RBP13.51□□□□□ -0.25
PRDM1-203ENST00000369096 FAM206AQ9NX38 181 aa13.51□□□□□ -0.25
PRDM1-203ENST00000369096 TYMSP04818 313 aa13.5□□□□□ -0.25
PRDM1-203ENST00000369096 SAPCD1Q5SSQ6 148 aa13.5□□□□□ -0.25
PRDM1-203ENST00000369096 NEUROG1Q92886 237 aa13.5□□□□□ -0.25
PRDM1-203ENST00000369096 NPIPB8E9PQR5 432 aa13.5□□□□□ -0.25
PRDM1-203ENST00000369096 NPIPB9F8W1W9 429 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms