RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 PSG2P11465 335 aa4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 ORM2P19652 201 aa4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 CBLP22681 906 aa4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 S100A2P29034 98 aa4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 CD70P32970 193 aa4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 OR1D5P58170 312 aa4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 HIST1H1AQ02539 215 aaPredicted RBP4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 ZNF154Q13106 437 aa4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 RGNQ15493 299 aa4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 SSX1Q16384 188 aa4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 GOLT1AQ6ZVE7 132 aa4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 NAA40Q86UY6 237 aa4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 OOSP2Q86WS3 158 aa4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 GAPTQ8N292 157 aa4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 PNKDQ8N490 385 aa4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 GVQW1Q8N7I0 195 aa4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 TCTEX1D1Q8N7M0 179 aa4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 OR2T12Q8NG77 320 aa4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 THEM6Q8WUY1 208 aa4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 TMEM255BQ8WV15 326 aa4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 OR5P3Q8WZ94 311 aa4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 ARPC1AQ92747 370 aa4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 NEUROG1Q92886 237 aa4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 ACY3Q96HD9 319 aa4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 GMPPAQ96IJ6 420 aaPredicted RBP4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 ATOH8Q96SQ7 321 aa4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 TMEM204Q9BSN7 226 aa4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 NDFIP1Q9BT67 221 aa4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 KRTAP1-5Q9BYS1 174 aa4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 PLA2G12AQ9BZM1 189 aa4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 ULBP3Q9BZM4 244 aa4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 SH2D2AQ9NP31 389 aa4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 UBE2TQ9NPD8 197 aaPredicted RBP4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 RBFOX1Q9NWB1 397 aaKnown RBP4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 NAT8BQ9UHF3 227 aa4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 ZNF580Q9UK33 172 aa4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 PKIGQ9Y2B9 76 aa4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 RFNGQ9Y644 331 aa4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.06□□□□□ -1.765e-8■■■■■ 27.8
ECHDC1-204ENST00000368292 HRNRQ86YZ3 2850 aaPredicted RBP4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 PIKFYVEQ9Y2I7 2098 aa4.06□□□□□ -1.76
ECHDC1-204ENST00000368292 HCFC1P51610 2035 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 A0A0A6YYD4 124 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 TRAV38-1A0A0B4J264 116 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 A0A0G2JN53 185 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 TRBV5-5A0A0J9YX44 114 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 A0A0U1RQV1 116 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 A0A1B0GV50 99 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 OR5H15A6NDH6 313 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 TLCD2A6NGC4 264 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 ZNF726A6NNF4 738 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 EEF1E1-BLOC1S5C9J1V9 151 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 K7EMT4 169 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 ZNHIT1O43257 154 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 EEF1E1O43324 174 aaKnown RBP4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 NRASP01111 189 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 ATP1B1P05026 303 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 REG1AP05451 166 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 SNRPCP09234 159 aaKnown RBP4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 GNB3P16520 340 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 ZNF708P17019 499 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 EVI2AP22794 236 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 FABP6P51161 128 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 SUB1P53999 127 aaKnown RBP eCLIP4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 ERVFC1-1P60608 527 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 RPS18P62269 152 aaKnown RBP4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 BTG1P62324 171 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 GNGT1P63211 74 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 TNFAIP6P98066 277 aaPredicted RBP4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 MXD1Q05195 221 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 IAH1Q2TAA2 248 aaPredicted RBP4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 KRTAP24-1Q3LI83 254 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 MORN2Q502X0 79 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 CLLU1Q5K131 121 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 ZNF684Q5T5D7 378 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 RUSC1-AS1Q66K80 236 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 CBLN2Q8IUK8 224 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 OR8I2Q8N0Y5 310 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 TMEM86AQ8N2M4 240 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 PACRGLQ8N7B6 248 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 ZNF441Q8N8Z8 693 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 OR1S1Q8NH92 325 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 ZFAND1Q8TCF1 268 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 VN1R17PQ8TDU5 208 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 ZNF418Q8TF45 676 aaPredicted RBP4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 TMEM158Q8WZ71 300 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 SMIM8Q96KF7 97 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 NKX6-2Q9C056 277 aaPredicted RBP4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 C20orf85Q9H1P6 137 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 OR2D2Q9H210 308 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 ISG20L2Q9H9L3 353 aaKnown RBP4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 UBQLN4Q9NRR5 601 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 UQCC1Q9NVA1 299 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 RBM22Q9NW64 420 aaKnown RBP eCLIP4.05□□□□□ -1.767e-6■■■■□ 24.6
ECHDC1-204ENST00000368292 TAS2R5Q9NYW4 299 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 RPS6KB2Q9UBS0 482 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 ST3GAL6Q9Y274 331 aa4.05□□□□□ -1.76
ECHDC1-204ENST00000368292 BTNL10A8MVZ5 291 aa4.04□□□□□ -1.76
ECHDC1-204ENST00000368292 H7C1C5 153 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms