RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 LSM6P62312 80 aaKnown RBP3.66□□□□□ -1.82
RNU4-39P-201ENST00000362455 TMEM183BQ1AE95 376 aa3.66□□□□□ -1.82
RNU4-39P-201ENST00000362455 TEX36Q5VZQ5 186 aa3.66□□□□□ -1.82
RNU4-39P-201ENST00000362455 TMEM183AQ8IXX5 376 aa3.66□□□□□ -1.82
RNU4-39P-201ENST00000362455 MKXQ8IYA7 352 aa3.66□□□□□ -1.82
RNU4-39P-201ENST00000362455 CMTM1Q8IZ96 169 aa3.66□□□□□ -1.82
RNU4-39P-201ENST00000362455 OR10A6Q8NH74 314 aa3.66□□□□□ -1.82
RNU4-39P-201ENST00000362455 CAPSLQ8WWF8 208 aa3.66□□□□□ -1.82
RNU4-39P-201ENST00000362455 APOBEC3DQ96AK3 386 aaPredicted RBP3.66□□□□□ -1.82
RNU4-39P-201ENST00000362455 PRRC1Q96M27 445 aa3.66□□□□□ -1.82
RNU4-39P-201ENST00000362455 CCL13Q99616 98 aa3.66□□□□□ -1.82
RNU4-39P-201ENST00000362455 CGREF1Q99674 301 aa3.66□□□□□ -1.82
RNU4-39P-201ENST00000362455 AUNIPQ9H7T9 357 aa3.66□□□□□ -1.82
RNU4-39P-201ENST00000362455 STX18Q9P2W9 335 aaKnown RBP3.66□□□□□ -1.82
RNU4-39P-201ENST00000362455 KAAG1Q9UBP8 84 aa3.66□□□□□ -1.82
RNU4-39P-201ENST00000362455 KPTNQ9Y664 436 aa3.66□□□□□ -1.82
RNU4-39P-201ENST00000362455 TRBV6-6A0A0A6YYG2 114 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 IGLV1-36A0A0B4J1U3 117 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 PLAC8L1A1L4L8 177 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 GMNCA6NCL1 334 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 CD300LBA8K4G0 201 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 TEX46H3BTG2 121 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 FXYD1O00168 92 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 NPFFO15130 113 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 SLC16A7O60669 478 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 CD14P08571 375 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 FBP1P09467 338 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 CXCL5P42830 114 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 TGM4P49221 684 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 TAS2R41P59536 307 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 RAP1AP62834 184 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 PAX5Q02548 391 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 PRKCDQ05655 676 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 LY6EQ16553 131 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 LDLRAD2Q5SZI1 272 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 NANOGP8Q6NSW7 305 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 SSX9Q7RTT3 188 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 HDDC2Q7Z4H3 204 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 KRTAP11-1Q8IUC1 163 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 OR6V1Q8N148 313 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 DYNAPQ8N1N2 210 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 FAM216BQ8N7L0 139 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 BPIFCQ8NFQ6 507 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 OR2AE1Q8NHA4 323 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 CD300LFQ8TDQ1 290 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 IL22RA2Q969J5 263 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 FAM3DQ96BQ1 224 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 TLCD1Q96CP7 247 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 FAM210BQ96KR6 192 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 FGF23Q9GZV9 251 aaPredicted RBP3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 SYT4Q9H2B2 425 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 CENPHQ9H3R5 247 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 NCOR1P1Q9H4R4 102 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 NMNAT1Q9HAN9 279 aaPredicted RBP3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 ATPIF1Q9UII2 106 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 NDUFAF1Q9Y375 327 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 MED31Q9Y3C7 131 aa3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 V9GYY5 206 aaPredicted RBP3.65□□□□□ -1.83
RNU4-39P-201ENST00000362455 TRAV38-1A0A0B4J264 116 aa3.64□□□□□ -1.83
RNU4-39P-201ENST00000362455 EFCAB9A8MZ26 197 aa3.64□□□□□ -1.83
RNU4-39P-201ENST00000362455 F5H5K5 113 aa3.64□□□□□ -1.83
RNU4-39P-201ENST00000362455 H3BUX3 64 aa3.64□□□□□ -1.83
RNU4-39P-201ENST00000362455 GGT2P36268 569 aa3.64□□□□□ -1.83
RNU4-39P-201ENST00000362455 RPS27P42677 84 aaKnown RBP3.64□□□□□ -1.83
RNU4-39P-201ENST00000362455 GUCA1AP43080 201 aaPredicted RBP3.64□□□□□ -1.83
RNU4-39P-201ENST00000362455 GPR4P46093 362 aa3.64□□□□□ -1.83
RNU4-39P-201ENST00000362455 RGS6P49758 472 aa3.64□□□□□ -1.83
RNU4-39P-201ENST00000362455 RAB13P51153 203 aa3.64□□□□□ -1.83
RNU4-39P-201ENST00000362455 CCR6P51684 374 aa3.64□□□□□ -1.83
RNU4-39P-201ENST00000362455 CRISP1P54107 249 aa3.64□□□□□ -1.83
RNU4-39P-201ENST00000362455 MAGOHP61326 146 aaKnown RBP3.64□□□□□ -1.83
RNU4-39P-201ENST00000362455 MXD1Q05195 221 aa3.64□□□□□ -1.83
RNU4-39P-201ENST00000362455 OR8G1Q15617 311 aa3.64□□□□□ -1.83
RNU4-39P-201ENST00000362455 OR8B8Q15620 311 aa3.64□□□□□ -1.83
RNU4-39P-201ENST00000362455 ZSCAN26Q16670 478 aa3.64□□□□□ -1.83
RNU4-39P-201ENST00000362455 KLHL12Q53G59 568 aa3.64□□□□□ -1.83
RNU4-39P-201ENST00000362455 ZNF493Q6ZR52 646 aa3.64□□□□□ -1.83
RNU4-39P-201ENST00000362455 VTCN1Q7Z7D3 282 aa3.64□□□□□ -1.83
RNU4-39P-201ENST00000362455 OAFQ86UD1 273 aa3.64□□□□□ -1.83
RNU4-39P-201ENST00000362455 Q8N2B8 174 aa3.64□□□□□ -1.83
RNU4-39P-201ENST00000362455 STPG2Q8N412 459 aa3.64□□□□□ -1.83
RNU4-39P-201ENST00000362455 SLC26A10Q8NG04 563 aa3.64□□□□□ -1.83
RNU4-39P-201ENST00000362455 OR5L1Q8NGL2 311 aa3.64□□□□□ -1.83
RNU4-39P-201ENST00000362455 OR11L1Q8NGX0 322 aa3.64□□□□□ -1.83
RNU4-39P-201ENST00000362455 LYSTQ99698 3801 aa3.64□□□□□ -1.83
RNU4-39P-201ENST00000362455 RERGLQ9H628 205 aa3.64□□□□□ -1.83
RNU4-39P-201ENST00000362455 MRPL22Q9NWU5 206 aaKnown RBP3.64□□□□□ -1.83
RNU4-39P-201ENST00000362455 CYB5R1Q9UHQ9 305 aa3.64□□□□□ -1.83
RNU4-39P-201ENST00000362455 ST3GAL6Q9Y274 331 aa3.64□□□□□ -1.83
RNU4-39P-201ENST00000362455 SIGLEC7Q9Y286 467 aa3.64□□□□□ -1.83
RNU4-39P-201ENST00000362455 IER3IP1Q9Y5U9 82 aa3.64□□□□□ -1.83
RNU4-39P-201ENST00000362455 POLR3GO15318 223 aaPredicted RBP3.63□□□□□ -1.83
RNU4-39P-201ENST00000362455 NDUFA2O43678 99 aa3.63□□□□□ -1.83
RNU4-39P-201ENST00000362455 CA11O75493 328 aa3.63□□□□□ -1.83
RNU4-39P-201ENST00000362455 PSG2P11465 335 aa3.63□□□□□ -1.83
RNU4-39P-201ENST00000362455 KDELR2P33947 212 aa3.63□□□□□ -1.83
RNU4-39P-201ENST00000362455 MAS1LP35410 378 aa3.63□□□□□ -1.83
RNU4-39P-201ENST00000362455 UBE2E1P51965 193 aa3.63□□□□□ -1.83
RNU4-39P-201ENST00000362455 BLCAPP62952 87 aa3.63□□□□□ -1.83
RNU4-39P-201ENST00000362455 KRR1Q13601 381 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms