RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 SPCS3P61009 180 aa18.57■□□□□ 0.56
SCAMP3-202ENST00000355379 TMEM177Q53S58 311 aa18.57■□□□□ 0.56
SCAMP3-202ENST00000355379 C1orf122Q6ZSJ8 110 aa18.57■□□□□ 0.56
SCAMP3-202ENST00000355379 PDPNQ86YL7 162 aa18.57■□□□□ 0.56
SCAMP3-202ENST00000355379 TGIF2LXQ8IUE1 241 aa18.57■□□□□ 0.56
SCAMP3-202ENST00000355379 KIR3DL3Q8N743 410 aa18.57■□□□□ 0.56
SCAMP3-202ENST00000355379 Q8N7P7 452 aa18.57■□□□□ 0.56
SCAMP3-202ENST00000355379 OR5C1Q8NGR4 320 aa18.57■□□□□ 0.56
SCAMP3-202ENST00000355379 DTD1Q8TEA8 209 aa18.57■□□□□ 0.56
SCAMP3-202ENST00000355379 MARVELD3Q96A59 401 aa18.57■□□□□ 0.56
SCAMP3-202ENST00000355379 NARFLQ9H6Q4 476 aa18.57■□□□□ 0.56
SCAMP3-202ENST00000355379 AMMECR1Q9Y4X0 333 aaPredicted RBP18.57■□□□□ 0.56
SCAMP3-202ENST00000355379 DOPEY1Q5JWR5 2465 aa18.56■□□□□ 0.56
SCAMP3-202ENST00000355379 LEUTXA8MZ59 168 aa18.56■□□□□ 0.56
SCAMP3-202ENST00000355379 OR4A47Q6IF82 309 aa18.56■□□□□ 0.56
SCAMP3-202ENST00000355379 TMEM14EPQ6UXP3 125 aa18.56■□□□□ 0.56
SCAMP3-202ENST00000355379 VKORC1L1Q8N0U8 176 aa18.56■□□□□ 0.56
SCAMP3-202ENST00000355379 ZNF525Q8N782 197 aa18.56■□□□□ 0.56
SCAMP3-202ENST00000355379 RNF141Q8WVD5 230 aa18.56■□□□□ 0.56
SCAMP3-202ENST00000355379 C15orf61A6NNL5 157 aa18.55■□□□□ 0.56
SCAMP3-202ENST00000355379 H3BP45 60 aa18.55■□□□□ 0.56
SCAMP3-202ENST00000355379 DFFBO76075 338 aa18.55■□□□□ 0.56
SCAMP3-202ENST00000355379 SEC11BP0C7V7 166 aa18.55■□□□□ 0.56
SCAMP3-202ENST00000355379 MC5RP33032 325 aa18.55■□□□□ 0.56
SCAMP3-202ENST00000355379 FOXA2Q9Y261 457 aaPredicted RBP18.55■□□□□ 0.56
SCAMP3-202ENST00000355379 A8MXK9 166 aa18.54■□□□□ 0.56
SCAMP3-202ENST00000355379 BUB1B-PAK6H3BSN5 160 aa18.54■□□□□ 0.56
SCAMP3-202ENST00000355379 FAM157CP0CG43 387 aa18.54■□□□□ 0.56
SCAMP3-202ENST00000355379 RAB13P51153 203 aa18.54■□□□□ 0.56
SCAMP3-202ENST00000355379 OR2B8PP59922 312 aa18.54■□□□□ 0.56
SCAMP3-202ENST00000355379 TMEM267Q0VDI3 215 aaPredicted RBP18.54■□□□□ 0.56
SCAMP3-202ENST00000355379 SPANXN5Q5MJ07 72 aa18.54■□□□□ 0.56
SCAMP3-202ENST00000355379 COMMD7Q86VX2 200 aa18.54■□□□□ 0.56
SCAMP3-202ENST00000355379 LHX4Q969G2 390 aa18.54■□□□□ 0.56
SCAMP3-202ENST00000355379 CXorf58Q96LI9 332 aa18.54■□□□□ 0.56
SCAMP3-202ENST00000355379 ATP5SQ99766 215 aa18.54■□□□□ 0.56
SCAMP3-202ENST00000355379 BET1LQ9NYM9 111 aa18.54■□□□□ 0.56
SCAMP3-202ENST00000355379 WASHC3Q9Y3C0 194 aa18.54■□□□□ 0.56
SCAMP3-202ENST00000355379 TRAV3A0A0B4J244 114 aa18.54■□□□□ 0.56
SCAMP3-202ENST00000355379 CEBPZOSA8MTT3 80 aa18.54■□□□□ 0.56
SCAMP3-202ENST00000355379 H7C2Y5 167 aa18.54■□□□□ 0.56
SCAMP3-202ENST00000355379 ENSAO43768 121 aaKnown RBP18.54■□□□□ 0.56
SCAMP3-202ENST00000355379 SCAF4O95104 1147 aaKnown RBP18.54■□□□□ 0.56
SCAMP3-202ENST00000355379 IFNA17P01571 189 aa18.54■□□□□ 0.56
SCAMP3-202ENST00000355379 IGKV1-16P04430 117 aa18.54■□□□□ 0.56
SCAMP3-202ENST00000355379 SPP1P10451 314 aa18.54■□□□□ 0.56
SCAMP3-202ENST00000355379 COX6B1P14854 86 aa18.54■□□□□ 0.56
SCAMP3-202ENST00000355379 PRTN3P24158 256 aa18.54■□□□□ 0.56
SCAMP3-202ENST00000355379 REG1BP48304 166 aa18.54■□□□□ 0.56
SCAMP3-202ENST00000355379 HBG1P69891 147 aa18.54■□□□□ 0.56
SCAMP3-202ENST00000355379 HBG2P69892 147 aa18.54■□□□□ 0.56
SCAMP3-202ENST00000355379 DIAPH2-AS1Q14236 149 aa18.54■□□□□ 0.56
SCAMP3-202ENST00000355379 CLINT1Q14677 625 aa18.54■□□□□ 0.56
SCAMP3-202ENST00000355379 OR11H6Q8NGC7 330 aa18.54■□□□□ 0.56
SCAMP3-202ENST00000355379 FLYWCH2Q96CP2 140 aaKnown RBP18.54■□□□□ 0.56
SCAMP3-202ENST00000355379 BARX1Q9HBU1 254 aaPredicted RBP18.54■□□□□ 0.56
SCAMP3-202ENST00000355379 TMEM14BQ9NUH8 114 aa18.54■□□□□ 0.56
SCAMP3-202ENST00000355379 PFDN2Q9UHV9 154 aa18.54■□□□□ 0.56
SCAMP3-202ENST00000355379 LRBAP50851 2863 aa18.54■□□□□ 0.56
SCAMP3-202ENST00000355379 UPK2O00526 184 aa18.53■□□□□ 0.56
SCAMP3-202ENST00000355379 SHOXO15266 292 aa18.53■□□□□ 0.56
SCAMP3-202ENST00000355379 METTL15P1P0C7V9 234 aa18.53■□□□□ 0.56
SCAMP3-202ENST00000355379 SULT1A2P50226 295 aa18.53■□□□□ 0.56
SCAMP3-202ENST00000355379 ARF6P62330 175 aa18.53■□□□□ 0.56
SCAMP3-202ENST00000355379 SP5Q6BEB4 398 aaPredicted RBP18.53■□□□□ 0.56
SCAMP3-202ENST00000355379 PUSL1Q8N0Z8 303 aaKnown RBP18.53■□□□□ 0.56
SCAMP3-202ENST00000355379 TMEM217Q8N7C4 229 aa18.53■□□□□ 0.56
SCAMP3-202ENST00000355379 OR4C13Q8NGP0 309 aa18.53■□□□□ 0.56
SCAMP3-202ENST00000355379 ZDHHC16Q969W1 377 aa18.53■□□□□ 0.56
SCAMP3-202ENST00000355379 BPESC1Q9GZL8 116 aa18.53■□□□□ 0.56
SCAMP3-202ENST00000355379 PRNDQ9UKY0 176 aa18.53■□□□□ 0.56
SCAMP3-202ENST00000355379 STRAPQ9Y3F4 350 aaKnown RBP18.53■□□□□ 0.56
SCAMP3-202ENST00000355379 TET2Q6N021 2002 aaPredicted RBP18.52■□□□□ 0.56
SCAMP3-202ENST00000355379 LMO4P61968 165 aa18.52■□□□□ 0.56
SCAMP3-202ENST00000355379 PNKDQ8N490 385 aa18.52■□□□□ 0.56
SCAMP3-202ENST00000355379 OR4P4Q8NGL7 312 aa18.52■□□□□ 0.56
SCAMP3-202ENST00000355379 CLDND2Q8NHS1 167 aa18.52■□□□□ 0.56
SCAMP3-202ENST00000355379 SAT2Q96F10 170 aaPredicted RBP18.52■□□□□ 0.56
SCAMP3-202ENST00000355379 CLCC1Q96S66 551 aa18.52■□□□□ 0.56
SCAMP3-202ENST00000355379 NUP50Q9UKX7 468 aa18.52■□□□□ 0.56
SCAMP3-202ENST00000355379 KPTNQ9Y664 436 aa18.52■□□□□ 0.56
SCAMP3-202ENST00000355379 SRRM4A7MD48 611 aaKnown RBP18.51■□□□□ 0.55
SCAMP3-202ENST00000355379 LY6LH3BQJ8 138 aa18.51■□□□□ 0.55
SCAMP3-202ENST00000355379 NDUFS8O00217 210 aa18.51■□□□□ 0.55
SCAMP3-202ENST00000355379 FBXO24O75426 580 aa18.51■□□□□ 0.55
SCAMP3-202ENST00000355379 COX7A1P24310 79 aa18.51■□□□□ 0.55
SCAMP3-202ENST00000355379 ZFP36P26651 326 aaKnown RBP18.51■□□□□ 0.55
SCAMP3-202ENST00000355379 HSPE1P61604 102 aaKnown RBP18.51■□□□□ 0.55
SCAMP3-202ENST00000355379 PAX2Q02962 417 aa18.51■□□□□ 0.55
SCAMP3-202ENST00000355379 HAPLN4Q86UW8 402 aa18.51■□□□□ 0.55
SCAMP3-202ENST00000355379 HARBI1Q96MB7 349 aa18.51■□□□□ 0.55
SCAMP3-202ENST00000355379 OR4C12Q96R67 309 aa18.51■□□□□ 0.55
SCAMP3-202ENST00000355379 TSNAXQ99598 290 aaKnown RBP18.51■□□□□ 0.55
SCAMP3-202ENST00000355379 UNKLQ9H9P5 680 aaKnown RBP18.51■□□□□ 0.55
SCAMP3-202ENST00000355379 ZNF257Q9Y2Q1 563 aa18.51■□□□□ 0.55
SCAMP3-202ENST00000355379 ARG1P05089 322 aa18.5■□□□□ 0.55
SCAMP3-202ENST00000355379 VDAC2P45880 294 aaPredicted RBP18.5■□□□□ 0.55
SCAMP3-202ENST00000355379 DLX1P56177 255 aa18.5■□□□□ 0.55
SCAMP3-202ENST00000355379 ARL16Q0P5N6 197 aa18.5■□□□□ 0.55
SCAMP3-202ENST00000355379 OR4A5Q8NH83 315 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms