RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 MDKP21741 143 aaPredicted RBP9.45□□□□□ -0.9
SPTLC1-202ENST00000337841 VDAC2P45880 294 aaPredicted RBP9.45□□□□□ -0.9
SPTLC1-202ENST00000337841 COMPP49747 757 aaPredicted RBP9.45□□□□□ -0.9
SPTLC1-202ENST00000337841 BRWD1-AS2P59051 145 aa9.45□□□□□ -0.9
SPTLC1-202ENST00000337841 UBE2KP61086 200 aa9.45□□□□□ -0.9
SPTLC1-202ENST00000337841 AWAT1Q58HT5 328 aa9.45□□□□□ -0.9
SPTLC1-202ENST00000337841 Q6ZS46 218 aa9.45□□□□□ -0.9
SPTLC1-202ENST00000337841 SLC35E3Q7Z769 313 aa9.45□□□□□ -0.9
SPTLC1-202ENST00000337841 FOXRED2Q8IWF2 684 aa9.45□□□□□ -0.9
SPTLC1-202ENST00000337841 VSTM2AQ8TAG5 236 aa9.45□□□□□ -0.9
SPTLC1-202ENST00000337841 MRGPRFQ96AM1 343 aa9.45□□□□□ -0.9
SPTLC1-202ENST00000337841 CLCC1Q96S66 551 aa9.45□□□□□ -0.9
SPTLC1-202ENST00000337841 MDFIQ99750 246 aa9.45□□□□□ -0.9
SPTLC1-202ENST00000337841 SIGLEC9Q9Y336 463 aa9.45□□□□□ -0.9
SPTLC1-202ENST00000337841 C3orf85A0A1B0GTC6 90 aa9.44□□□□□ -0.9
SPTLC1-202ENST00000337841 PLA2G10O15496 165 aa9.44□□□□□ -0.9
SPTLC1-202ENST00000337841 LYRM1O43325 122 aa9.44□□□□□ -0.9
SPTLC1-202ENST00000337841 CREBL2O60519 120 aaPredicted RBP9.44□□□□□ -0.9
SPTLC1-202ENST00000337841 RAMP3O60896 148 aa9.44□□□□□ -0.9
SPTLC1-202ENST00000337841 UPK1BO75841 260 aa9.44□□□□□ -0.9
SPTLC1-202ENST00000337841 ATG12O94817 140 aa9.44□□□□□ -0.9
SPTLC1-202ENST00000337841 IGLV2-23P01705 113 aa9.44□□□□□ -0.9
SPTLC1-202ENST00000337841 HLA-DRB1P01911 266 aa9.44□□□□□ -0.9
SPTLC1-202ENST00000337841 NQO2P16083 231 aa9.44□□□□□ -0.9
SPTLC1-202ENST00000337841 TAS2R31P59538 309 aa9.44□□□□□ -0.9
SPTLC1-202ENST00000337841 ERVK-16P61578 105 aa9.44□□□□□ -0.9
SPTLC1-202ENST00000337841 RBMS2Q15434 407 aaKnown RBP9.44□□□□□ -0.9
SPTLC1-202ENST00000337841 MZT2BQ6NZ67 158 aa9.44□□□□□ -0.9
SPTLC1-202ENST00000337841 ZNF562Q6V9R5 426 aa9.44□□□□□ -0.9
SPTLC1-202ENST00000337841 CENPVQ7Z7K6 275 aaPredicted RBP9.44□□□□□ -0.9
SPTLC1-202ENST00000337841 PPP1R27Q86WC6 154 aa9.44□□□□□ -0.9
SPTLC1-202ENST00000337841 SGPP2Q8IWX5 399 aa9.44□□□□□ -0.9
SPTLC1-202ENST00000337841 RHOVQ96L33 236 aa9.44□□□□□ -0.9
SPTLC1-202ENST00000337841 GON7Q9BXV9 100 aa9.44□□□□□ -0.9
SPTLC1-202ENST00000337841 C5orf66Q9H5L9 145 aa9.44□□□□□ -0.9
SPTLC1-202ENST00000337841 ZFHX3Q15911 3703 aa9.43□□□□□ -0.9
SPTLC1-202ENST00000337841 H0Y980 276 aa9.43□□□□□ -0.9
SPTLC1-202ENST00000337841 AP4M1O00189 453 aa9.43□□□□□ -0.9
SPTLC1-202ENST00000337841 FCN1O00602 326 aa9.43□□□□□ -0.9
SPTLC1-202ENST00000337841 ACTL6BO94805 426 aa9.43□□□□□ -0.9
SPTLC1-202ENST00000337841 OR2A4O95047 310 aa9.43□□□□□ -0.9
SPTLC1-202ENST00000337841 CNIH1O95406 144 aa9.43□□□□□ -0.9
SPTLC1-202ENST00000337841 CRYGBP07316 175 aa9.43□□□□□ -0.9
SPTLC1-202ENST00000337841 RPA2P15927 270 aa9.43□□□□□ -0.9
SPTLC1-202ENST00000337841 AKR1C4P17516 323 aa9.43□□□□□ -0.9
SPTLC1-202ENST00000337841 CCR6P51684 374 aa9.43□□□□□ -0.9
SPTLC1-202ENST00000337841 CX3CL1P78423 397 aa9.43□□□□□ -0.9
SPTLC1-202ENST00000337841 DHODHQ02127 395 aa9.43□□□□□ -0.9
SPTLC1-202ENST00000337841 ZNF585BQ52M93 769 aa9.43□□□□□ -0.9
SPTLC1-202ENST00000337841 C3orf56Q8N813 242 aa9.43□□□□□ -0.9
SPTLC1-202ENST00000337841 DMBX1Q8NFW5 382 aa9.43□□□□□ -0.9
SPTLC1-202ENST00000337841 OR4A5Q8NH83 315 aa9.43□□□□□ -0.9
SPTLC1-202ENST00000337841 R3HDM4Q96D70 268 aa9.43□□□□□ -0.9
SPTLC1-202ENST00000337841 OR2A7Q96R45 310 aa9.43□□□□□ -0.9
SPTLC1-202ENST00000337841 OR51J1Q9H342 316 aa9.43□□□□□ -0.9
SPTLC1-202ENST00000337841 SERTAD4Q9NUC0 356 aa9.43□□□□□ -0.9
SPTLC1-202ENST00000337841 COMMD9Q9P000 198 aa9.43□□□□□ -0.9
SPTLC1-202ENST00000337841 VSIG4Q9Y279 399 aa9.43□□□□□ -0.9
SPTLC1-202ENST00000337841 CRYM-AS1A6NIL9 109 aa9.42□□□□□ -0.9
SPTLC1-202ENST00000337841 S1PR2O95136 353 aa9.42□□□□□ -0.9
SPTLC1-202ENST00000337841 NDUFB6O95139 128 aa9.42□□□□□ -0.9
SPTLC1-202ENST00000337841 KRASP01116 189 aa9.42□□□□□ -0.9
SPTLC1-202ENST00000337841 SAA1P0DJI8 122 aaPredicted RBP9.42□□□□□ -0.9
SPTLC1-202ENST00000337841 VSIG10L2P0DP72 767 aa9.42□□□□□ -0.9
SPTLC1-202ENST00000337841 ANXA3P12429 323 aa9.42□□□□□ -0.9
SPTLC1-202ENST00000337841 PROK1P58294 105 aa9.42□□□□□ -0.9
SPTLC1-202ENST00000337841 TMEM267Q0VDI3 215 aaPredicted RBP9.42□□□□□ -0.9
SPTLC1-202ENST00000337841 FXYD3Q14802 87 aa9.42□□□□□ -0.9
SPTLC1-202ENST00000337841 POU2AF1Q16633 256 aa9.42□□□□□ -0.9
SPTLC1-202ENST00000337841 PRSS8Q16651 343 aa9.42□□□□□ -0.9
SPTLC1-202ENST00000337841 TRIM16LQ309B1 348 aa9.42□□□□□ -0.9
SPTLC1-202ENST00000337841 SP6Q3SY56 376 aa9.42□□□□□ -0.9
SPTLC1-202ENST00000337841 SSX9Q7RTT3 188 aa9.42□□□□□ -0.9
SPTLC1-202ENST00000337841 TMED4Q7Z7H5 227 aa9.42□□□□□ -0.9
SPTLC1-202ENST00000337841 MMD2Q8IY49 270 aa9.42□□□□□ -0.9
SPTLC1-202ENST00000337841 VKORC1L1Q8N0U8 176 aa9.42□□□□□ -0.9
SPTLC1-202ENST00000337841 ADAD2Q8NCV1 583 aaKnown RBP9.42□□□□□ -0.9
SPTLC1-202ENST00000337841 ABHD5Q8WTS1 349 aa9.42□□□□□ -0.9
SPTLC1-202ENST00000337841 CHPT1Q8WUD6 406 aa9.42□□□□□ -0.9
SPTLC1-202ENST00000337841 TSC22D3Q99576 134 aa9.42□□□□□ -0.9
SPTLC1-202ENST00000337841 NAA60Q9H7X0 242 aa9.42□□□□□ -0.9
SPTLC1-202ENST00000337841 ATRQ13535 2644 aa9.42□□□□□ -0.9
SPTLC1-202ENST00000337841 IGHV7-81A0A0B4J1V7 117 aa9.41□□□□□ -0.9
SPTLC1-202ENST00000337841 PIGBOS1A0A0B4J2F0 54 aa9.41□□□□□ -0.9
SPTLC1-202ENST00000337841 FAM240BA0A1B0GVZ2 78 aa9.41□□□□□ -0.9
SPTLC1-202ENST00000337841 LINC01548A6NM66 108 aa9.41□□□□□ -0.9
SPTLC1-202ENST00000337841 SNAPC5O75971 98 aa9.41□□□□□ -0.9
SPTLC1-202ENST00000337841 CA2P00918 260 aa9.41□□□□□ -0.9
SPTLC1-202ENST00000337841 MAS1LP35410 378 aa9.41□□□□□ -0.9
SPTLC1-202ENST00000337841 DEFA1P59665 94 aa9.41□□□□□ -0.9
SPTLC1-202ENST00000337841 DEFA3P59666 94 aa9.41□□□□□ -0.9
SPTLC1-202ENST00000337841 GNB1P62873 340 aa9.41□□□□□ -0.9
SPTLC1-202ENST00000337841 SLC35B1P78383 322 aa9.41□□□□□ -0.9
SPTLC1-202ENST00000337841 ASAH1Q13510 395 aa9.41□□□□□ -0.9
SPTLC1-202ENST00000337841 TMEM128Q5BJH2 165 aa9.41□□□□□ -0.9
SPTLC1-202ENST00000337841 PUSL1Q8N0Z8 303 aaKnown RBP9.41□□□□□ -0.9
SPTLC1-202ENST00000337841 CADM3Q8N126 398 aa9.41□□□□□ -0.9
SPTLC1-202ENST00000337841 CENPSQ8N2Z9 138 aa9.41□□□□□ -0.9
SPTLC1-202ENST00000337841 KLHDC1Q8N7A1 406 aa9.41□□□□□ -0.9
SPTLC1-202ENST00000337841 TMEM167AQ8TBQ9 72 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms