RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 ZNF735P0CB33 412 aa14.53□□□□□ -0.08
TRAPPC11-201ENST00000334690 MST1P26927 711 aa14.53□□□□□ -0.08
TRAPPC11-201ENST00000334690 LRRC75BQ2VPJ9 315 aa14.53□□□□□ -0.08
TRAPPC11-201ENST00000334690 C1orf162Q8NEQ5 155 aaPredicted RBP14.53□□□□□ -0.08
TRAPPC11-201ENST00000334690 SLC25A33Q9BSK2 321 aa14.53□□□□□ -0.08
TRAPPC11-201ENST00000334690 IGHV3-21A0A0B4J1V1 117 aa14.53□□□□□ -0.08
TRAPPC11-201ENST00000334690 IGKV1-9A0A0C4DH69 117 aa14.53□□□□□ -0.08
TRAPPC11-201ENST00000334690 SFTPCP11686 197 aa14.53□□□□□ -0.08
TRAPPC11-201ENST00000334690 CDX1P47902 265 aaPredicted RBP14.53□□□□□ -0.08
TRAPPC11-201ENST00000334690 TIMM23BQ5SRD1 257 aa14.53□□□□□ -0.08
TRAPPC11-201ENST00000334690 BPIFA4PQ86YQ2 179 aa14.53□□□□□ -0.08
TRAPPC11-201ENST00000334690 OR9G1Q8NH87 305 aa14.53□□□□□ -0.08
TRAPPC11-201ENST00000334690 QTRT1Q9BXR0 403 aaKnown RBP14.53□□□□□ -0.08
TRAPPC11-201ENST00000334690 IGHV3-72A0A0B4J1Y9 119 aa14.53□□□□□ -0.08
TRAPPC11-201ENST00000334690 SLC25A17O43808 307 aa14.53□□□□□ -0.08
TRAPPC11-201ENST00000334690 LY6G6FQ5SQ64 297 aa14.53□□□□□ -0.08
TRAPPC11-201ENST00000334690 ABHD12Q8N2K0 398 aa14.53□□□□□ -0.08
TRAPPC11-201ENST00000334690 GATAD1Q8WUU5 269 aa14.53□□□□□ -0.08
TRAPPC11-201ENST00000334690 TMEM186Q96B77 213 aa14.53□□□□□ -0.08
TRAPPC11-201ENST00000334690 LINC00518Q8N0U6 118 aa14.53□□□□□ -0.08
TRAPPC11-201ENST00000334690 A0A087WV48 116 aa14.52□□□□□ -0.08
TRAPPC11-201ENST00000334690 SH2D7A6NKC9 451 aaPredicted RBP14.52□□□□□ -0.08
TRAPPC11-201ENST00000334690 ZNF146Q15072 292 aa14.52□□□□□ -0.08
TRAPPC11-201ENST00000334690 ABLIM2Q6H8Q1 611 aa14.52□□□□□ -0.08
TRAPPC11-201ENST00000334690 HCP5Q6MZN7 132 aa14.52□□□□□ -0.08
TRAPPC11-201ENST00000334690 FDCSPQ8NFU4 85 aa14.52□□□□□ -0.08
TRAPPC11-201ENST00000334690 PRR7Q8TB68 274 aa14.52□□□□□ -0.08
TRAPPC11-201ENST00000334690 CDK2AP1O14519 115 aa14.52□□□□□ -0.09
TRAPPC11-201ENST00000334690 ARL14EPLP0DKL9 152 aa14.52□□□□□ -0.09
TRAPPC11-201ENST00000334690 GFI1Q99684 422 aa14.52□□□□□ -0.09
TRAPPC11-201ENST00000334690 UBTD1Q9HAC8 227 aa14.52□□□□□ -0.09
TRAPPC11-201ENST00000334690 METTL1Q9UBP6 276 aaKnown RBP14.52□□□□□ -0.09
TRAPPC11-201ENST00000334690 CACNA1GO43497 2377 aa14.52□□□□□ -0.09
TRAPPC11-201ENST00000334690 TGIF2-C20orf24A0A0A6YYL0 155 aa14.52□□□□□ -0.09
TRAPPC11-201ENST00000334690 PGPA6NDG6 321 aa14.52□□□□□ -0.09
TRAPPC11-201ENST00000334690 CBY3A6NI87 242 aa14.52□□□□□ -0.09
TRAPPC11-201ENST00000334690 VENTXO95231 258 aa14.52□□□□□ -0.09
TRAPPC11-201ENST00000334690 OR4A5Q8NH83 315 aa14.52□□□□□ -0.09
TRAPPC11-201ENST00000334690 TMEM171Q8WVE6 324 aa14.52□□□□□ -0.09
TRAPPC11-201ENST00000334690 GPR61Q9BZJ8 451 aa14.52□□□□□ -0.09
TRAPPC11-201ENST00000334690 CDC42EP3Q9UKI2 254 aa14.52□□□□□ -0.09
TRAPPC11-201ENST00000334690 CD99P14209 185 aa14.51□□□□□ -0.09
TRAPPC11-201ENST00000334690 SLC35B1P78383 322 aa14.51□□□□□ -0.09
TRAPPC11-201ENST00000334690 OR51M1Q9H341 326 aa14.51□□□□□ -0.09
TRAPPC11-201ENST00000334690 DICER1Q9UPY3 1922 aaKnown RBP14.51□□□□□ -0.09
TRAPPC11-201ENST00000334690 RHBDL1O75783 438 aa14.51□□□□□ -0.09
TRAPPC11-201ENST00000334690 ZNF137PP52743 207 aa14.51□□□□□ -0.09
TRAPPC11-201ENST00000334690 PAQR4Q8N4S7 273 aaPredicted RBP14.51□□□□□ -0.09
TRAPPC11-201ENST00000334690 GTF3AQ92664 365 aaKnown RBP14.51□□□□□ -0.09
TRAPPC11-201ENST00000334690 DPF1Q92782 380 aa14.51□□□□□ -0.09
TRAPPC11-201ENST00000334690 HSPB9Q9BQS6 159 aa14.51□□□□□ -0.09
TRAPPC11-201ENST00000334690 Q1RN00 199 aa14.51□□□□□ -0.09
TRAPPC11-201ENST00000334690 ACP7Q6ZNF0 438 aa14.51□□□□□ -0.09
TRAPPC11-201ENST00000334690 PRNTQ86SH4 94 aa14.51□□□□□ -0.09
TRAPPC11-201ENST00000334690 OR51G1Q8NGK1 321 aa14.51□□□□□ -0.09
TRAPPC11-201ENST00000334690 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.51□□□□□ -0.09
TRAPPC11-201ENST00000334690 WDR25Q64LD2 544 aaPredicted RBP14.51□□□□□ -0.09
TRAPPC11-201ENST00000334690 RBM14Q96PK6 669 aaKnown RBP14.51□□□□□ -0.09
TRAPPC11-201ENST00000334690 RNF126Q9BV68 326 aa14.51□□□□□ -0.09
TRAPPC11-201ENST00000334690 TMEM56-RWDD3S4R434 201 aa14.51□□□□□ -0.09
TRAPPC11-201ENST00000334690 A0A0G2JMM0 328 aa14.5□□□□□ -0.09
TRAPPC11-201ENST00000334690 A0A1W2PPB8 328 aa14.5□□□□□ -0.09
TRAPPC11-201ENST00000334690 A0A1W2PRS3 328 aa14.5□□□□□ -0.09
TRAPPC11-201ENST00000334690 PQLC2LA1A4F0 135 aa14.5□□□□□ -0.09
TRAPPC11-201ENST00000334690 KIR3DP1A8MWS1 328 aa14.5□□□□□ -0.09
TRAPPC11-201ENST00000334690 CECR9P0C854 216 aa14.5□□□□□ -0.09
TRAPPC11-201ENST00000334690 ECSCRQ19T08 205 aa14.5□□□□□ -0.09
TRAPPC11-201ENST00000334690 PET117Q6UWS5 81 aa14.5□□□□□ -0.09
TRAPPC11-201ENST00000334690 NABP2Q9BQ15 211 aa14.5□□□□□ -0.09
TRAPPC11-201ENST00000334690 GGACTQ9BVM4 153 aa14.5□□□□□ -0.09
TRAPPC11-201ENST00000334690 SBF1O95248 1867 aa14.5□□□□□ -0.09
TRAPPC11-201ENST00000334690 WNT9BO14905 357 aa14.5□□□□□ -0.09
TRAPPC11-201ENST00000334690 C17orf82Q86X59 251 aaPredicted RBP14.5□□□□□ -0.09
TRAPPC11-201ENST00000334690 KCNMB2Q9Y691 235 aa14.5□□□□□ -0.09
TRAPPC11-201ENST00000334690 NBASA2RRP1 2371 aa14.5□□□□□ -0.09
TRAPPC11-201ENST00000334690 PPOXP50336 477 aa14.49□□□□□ -0.09
TRAPPC11-201ENST00000334690 HOXA4Q00056 320 aaPredicted RBP14.49□□□□□ -0.09
TRAPPC11-201ENST00000334690 ZNRF1Q8ND25 227 aa14.49□□□□□ -0.09
TRAPPC11-201ENST00000334690 OR10S1Q8NGN2 331 aa14.49□□□□□ -0.09
TRAPPC11-201ENST00000334690 WBP1Q96G27 269 aa14.49□□□□□ -0.09
TRAPPC11-201ENST00000334690 MEGF10Q96KG7 1140 aa14.49□□□□□ -0.09
TRAPPC11-201ENST00000334690 TMSB15BA0A087X1C1 80 aa14.49□□□□□ -0.09
TRAPPC11-201ENST00000334690 PLAUP00749 431 aa14.49□□□□□ -0.09
TRAPPC11-201ENST00000334690 CA7P43166 264 aa14.49□□□□□ -0.09
TRAPPC11-201ENST00000334690 PRDM6Q9NQX0 595 aa14.49□□□□□ -0.09
TRAPPC11-201ENST00000334690 SNRPCP09234 159 aaKnown RBP14.49□□□□□ -0.09
TRAPPC11-201ENST00000334690 PSG7Q13046 419 aa14.49□□□□□ -0.09
TRAPPC11-201ENST00000334690 VWA1Q6PCB0 445 aa14.49□□□□□ -0.09
TRAPPC11-201ENST00000334690 LEAP2Q969E1 77 aa14.49□□□□□ -0.09
TRAPPC11-201ENST00000334690 TMEM208Q9BTX3 173 aa14.49□□□□□ -0.09
TRAPPC11-201ENST00000334690 MRPL32Q9BYC8 188 aaKnown RBP14.49□□□□□ -0.09
TRAPPC11-201ENST00000334690 HILPDAQ9Y5L2 63 aa14.49□□□□□ -0.09
TRAPPC11-201ENST00000334690 TNFSF10P50591 281 aa14.49□□□□□ -0.09
TRAPPC11-201ENST00000334690 DNM1P46Q6ZS02 220 aa14.49□□□□□ -0.09
TRAPPC11-201ENST00000334690 ZNF319Q9P2F9 582 aa14.49□□□□□ -0.09
TRAPPC11-201ENST00000334690 SCN5AQ14524 2016 aa14.49□□□□□ -0.09
TRAPPC11-201ENST00000334690 EIF3GO75821 320 aaKnown RBP eCLIP14.48□□□□□ -0.09
TRAPPC11-201ENST00000334690 SCGB1C2P0DMR2 95 aa14.48□□□□□ -0.09
TRAPPC11-201ENST00000334690 ARTNQ5T4W7 220 aa14.48□□□□□ -0.09
TRAPPC11-201ENST00000334690 LYRM7Q5U5X0 104 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms