RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 RHBDL1O75783 438 aa11.56□□□□□ -0.56
SYNE3-201ENST00000334258 TNFSF13O75888 250 aa11.56□□□□□ -0.56
SYNE3-201ENST00000334258 SERF1AO75920 110 aa11.56□□□□□ -0.56
SYNE3-201ENST00000334258 IGLV2-14P01704 120 aa11.56□□□□□ -0.56
SYNE3-201ENST00000334258 IL6RP08887 468 aaPredicted RBP11.56□□□□□ -0.56
SYNE3-201ENST00000334258 KRTDAPP60985 99 aa11.56□□□□□ -0.56
SYNE3-201ENST00000334258 GSX1Q9H4S2 264 aaPredicted RBP11.56□□□□□ -0.56
SYNE3-201ENST00000334258 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.56□□□□□ -0.56
SYNE3-201ENST00000334258 M0R296 226 aa11.55□□□□□ -0.56
SYNE3-201ENST00000334258 OR5AU1Q8NGC0 362 aa11.55□□□□□ -0.56
SYNE3-201ENST00000334258 APOBEC3DQ96AK3 386 aaPredicted RBP11.55□□□□□ -0.56
SYNE3-201ENST00000334258 ELOVL5Q9NYP7 299 aa11.55□□□□□ -0.56
SYNE3-201ENST00000334258 ZFP30Q9Y2G7 519 aa11.55□□□□□ -0.56
SYNE3-201ENST00000334258 RNF212BA8MTL3 300 aa11.55□□□□□ -0.56
SYNE3-201ENST00000334258 FAM90A26D6RGX4 464 aa11.55□□□□□ -0.56
SYNE3-201ENST00000334258 TDGF1P13385 188 aa11.55□□□□□ -0.56
SYNE3-201ENST00000334258 CDKN1AP38936 164 aa11.55□□□□□ -0.56
SYNE3-201ENST00000334258 SLC24A4Q8NFF2 622 aa11.55□□□□□ -0.56
SYNE3-201ENST00000334258 SEPSECSQ9HD40 501 aaKnown RBP11.55□□□□□ -0.56
SYNE3-201ENST00000334258 MED13Q9UHV7 2174 aa11.55□□□□□ -0.56
SYNE3-201ENST00000334258 RBFOX2O43251 390 aaKnown RBP eCLIP11.55□□□□□ -0.56
SYNE3-201ENST00000334258 DNPH1O43598 174 aa11.55□□□□□ -0.56
SYNE3-201ENST00000334258 RFPL3SP0C7P2 107 aa11.55□□□□□ -0.56
SYNE3-201ENST00000334258 CA6P23280 308 aa11.55□□□□□ -0.56
SYNE3-201ENST00000334258 PAFAH1B2P68402 229 aa11.55□□□□□ -0.56
SYNE3-201ENST00000334258 FOXL1Q12952 345 aa11.55□□□□□ -0.56
SYNE3-201ENST00000334258 OR10G8Q8NGN5 311 aa11.55□□□□□ -0.56
SYNE3-201ENST00000334258 PRRG4Q9BZD6 226 aa11.55□□□□□ -0.56
SYNE3-201ENST00000334258 STRADBQ9C0K7 418 aa11.55□□□□□ -0.56
SYNE3-201ENST00000334258 NKX6-3A6NJ46 265 aa11.54□□□□□ -0.56
SYNE3-201ENST00000334258 RANP62826 216 aaKnown RBP11.54□□□□□ -0.56
SYNE3-201ENST00000334258 GNG3P63215 75 aa11.54□□□□□ -0.56
SYNE3-201ENST00000334258 CFAP161Q6P656 301 aa11.54□□□□□ -0.56
SYNE3-201ENST00000334258 ODAMA1E959 279 aa11.54□□□□□ -0.56
SYNE3-201ENST00000334258 FCN1O00602 326 aa11.54□□□□□ -0.56
SYNE3-201ENST00000334258 MLNRO43193 412 aa11.54□□□□□ -0.56
SYNE3-201ENST00000334258 CD99P14209 185 aa11.54□□□□□ -0.56
SYNE3-201ENST00000334258 COLCA1Q6ZS62 124 aa11.54□□□□□ -0.56
SYNE3-201ENST00000334258 TMEM144Q7Z5S9 345 aa11.54□□□□□ -0.56
SYNE3-201ENST00000334258 GGNQ86UU5 652 aa11.54□□□□□ -0.56
SYNE3-201ENST00000334258 KCNE4Q8WWG9 221 aa11.54□□□□□ -0.56
SYNE3-201ENST00000334258 OR2D2Q9H210 308 aa11.54□□□□□ -0.56
SYNE3-201ENST00000334258 TUBG2Q9NRH3 451 aa11.54□□□□□ -0.56
SYNE3-201ENST00000334258 HSPB7Q9UBY9 170 aa11.54□□□□□ -0.56
SYNE3-201ENST00000334258 IGHV1-45A0A0A0MS14 117 aa11.54□□□□□ -0.56
SYNE3-201ENST00000334258 LRRC30A6NM36 301 aa11.54□□□□□ -0.56
SYNE3-201ENST00000334258 GDF1P27539 372 aa11.54□□□□□ -0.56
SYNE3-201ENST00000334258 SRD5A2P31213 254 aa11.54□□□□□ -0.56
SYNE3-201ENST00000334258 OTX2P32243 289 aa11.54□□□□□ -0.56
SYNE3-201ENST00000334258 UBE2NP61088 152 aaKnown RBP11.54□□□□□ -0.56
SYNE3-201ENST00000334258 COL5A1-AS1Q5SY13 56 aa11.54□□□□□ -0.56
SYNE3-201ENST00000334258 SPATA46Q5T0L3 261 aa11.54□□□□□ -0.56
SYNE3-201ENST00000334258 H2BFWTQ7Z2G1 175 aa11.54□□□□□ -0.56
SYNE3-201ENST00000334258 SIGLECL1Q8N7X8 197 aa11.54□□□□□ -0.56
SYNE3-201ENST00000334258 C20orf144Q9BQM9 153 aa11.54□□□□□ -0.56
SYNE3-201ENST00000334258 MRPL18Q9H0U6 180 aaKnown RBP11.54□□□□□ -0.56
SYNE3-201ENST00000334258 SLC17A3O00476 420 aa11.53□□□□□ -0.56
SYNE3-201ENST00000334258 PLP2Q04941 152 aa11.53□□□□□ -0.56
SYNE3-201ENST00000334258 TPTE2P1Q5T6R2 138 aa11.53□□□□□ -0.56
SYNE3-201ENST00000334258 MRPL14Q6P1L8 145 aaKnown RBP11.53□□□□□ -0.56
SYNE3-201ENST00000334258 SPINK4O60575 86 aa11.53□□□□□ -0.56
SYNE3-201ENST00000334258 IER3P46695 156 aa11.53□□□□□ -0.56
SYNE3-201ENST00000334258 FOXG1P55316 489 aaPredicted RBP11.53□□□□□ -0.56
SYNE3-201ENST00000334258 GCNT2Q8N0V5 402 aa11.53□□□□□ -0.56
SYNE3-201ENST00000334258 CIB3Q96Q77 187 aaPredicted RBP11.53□□□□□ -0.56
SYNE3-201ENST00000334258 TRBV6-6A0A0A6YYG2 114 aa11.52□□□□□ -0.56
SYNE3-201ENST00000334258 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.52□□□□□ -0.56
SYNE3-201ENST00000334258 S1PR2O95136 353 aa11.52□□□□□ -0.56
SYNE3-201ENST00000334258 B3GALT5-AS1P59052 145 aa11.52□□□□□ -0.56
SYNE3-201ENST00000334258 TGFBR3Q03167 851 aa11.52□□□□□ -0.56
SYNE3-201ENST00000334258 MRPL49Q13405 166 aaKnown RBP11.52□□□□□ -0.56
SYNE3-201ENST00000334258 KCNIP1Q9NZI2 227 aa11.52□□□□□ -0.56
SYNE3-201ENST00000334258 UMODP07911 640 aa11.52□□□□□ -0.57
SYNE3-201ENST00000334258 PDLIM3Q53GG5 364 aaPredicted RBP11.52□□□□□ -0.57
SYNE3-201ENST00000334258 LINC00596Q86U02 117 aa11.52□□□□□ -0.57
SYNE3-201ENST00000334258 IMMP1LQ96LU5 166 aa11.52□□□□□ -0.57
SYNE3-201ENST00000334258 RELNP78509 3460 aa11.52□□□□□ -0.57
SYNE3-201ENST00000334258 OR2H2O95918 312 aa11.52□□□□□ -0.57
SYNE3-201ENST00000334258 BMI1P35226 326 aa11.52□□□□□ -0.57
SYNE3-201ENST00000334258 SELENOTP62341 195 aa11.52□□□□□ -0.57
SYNE3-201ENST00000334258 DHRS13Q6UX07 377 aa11.52□□□□□ -0.57
SYNE3-201ENST00000334258 TEX43Q6ZNM6 134 aa11.52□□□□□ -0.57
SYNE3-201ENST00000334258 AGBL5Q8NDL9 886 aa11.52□□□□□ -0.57
SYNE3-201ENST00000334258 OCC1Q8TAD7 63 aa11.52□□□□□ -0.57
SYNE3-201ENST00000334258 TXN2Q99757 166 aa11.52□□□□□ -0.57
SYNE3-201ENST00000334258 KCNIP2Q9NS61 270 aa11.52□□□□□ -0.57
SYNE3-201ENST00000334258 SCO2A0A1W2PP80 73 aa11.51□□□□□ -0.57
SYNE3-201ENST00000334258 TMPRSS2O15393 492 aa11.51□□□□□ -0.57
SYNE3-201ENST00000334258 WNT2P09544 360 aa11.51□□□□□ -0.57
SYNE3-201ENST00000334258 SP9P0CG40 484 aa11.51□□□□□ -0.57
SYNE3-201ENST00000334258 COX6A1P12074 109 aa11.51□□□□□ -0.57
SYNE3-201ENST00000334258 CATR1Q13166 79 aa11.51□□□□□ -0.57
SYNE3-201ENST00000334258 MMDQ15546 238 aa11.51□□□□□ -0.57
SYNE3-201ENST00000334258 FAM53AQ6NSI3 398 aaPredicted RBP11.51□□□□□ -0.57
SYNE3-201ENST00000334258 MOB1BQ7L9L4 216 aa11.51□□□□□ -0.57
SYNE3-201ENST00000334258 MRGPRDQ8TDS7 321 aa11.51□□□□□ -0.57
SYNE3-201ENST00000334258 RNF2Q99496 336 aa11.51□□□□□ -0.57
SYNE3-201ENST00000334258 ZNF586Q9NXT0 402 aa11.51□□□□□ -0.57
SYNE3-201ENST00000334258 TRAV34A0A0B4J273 112 aa11.51□□□□□ -0.57
SYNE3-201ENST00000334258 SNURFLB1AK76 121 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms