RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 DTX1Q86Y01 620 aa7.05□□□□□ -1.28
SKA2-201ENST00000330137 OR51H1Q8NH63 302 aa7.05□□□□□ -1.28
SKA2-201ENST00000330137 TMEM70Q9BUB7 260 aa7.05□□□□□ -1.28
SKA2-201ENST00000330137 DERL1Q9BUN8 251 aa7.05□□□□□ -1.28
SKA2-201ENST00000330137 SHANK1Q9Y566 2161 aa7.05□□□□□ -1.28
SKA2-201ENST00000330137 C2orf70A6NJV1 201 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 G3V3Y1 287 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 TRAPPC2LH3BP13 241 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 K7EN84 100 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 TNFSF12O43508 249 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 EFNA2O43921 213 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 SRIP30626 198 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 TMPRSS3P57727 454 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 MRPL49Q13405 166 aaKnown RBP7.04□□□□□ -1.28
SKA2-201ENST00000330137 RUNX3Q13761 415 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 MPV17L2Q567V2 206 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 WDR74Q6RFH5 385 aaPredicted RBP7.04□□□□□ -1.28
SKA2-201ENST00000330137 Q6ZVH6 145 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 Q8N7P7 452 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 ZNF611Q8N823 705 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 OR5A1Q8NGJ0 315 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 C18orf32Q8TCD1 76 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 RCHY1Q96PM5 261 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 KCNIP1Q9NZI2 227 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 IZUMO1RA6ND01 250 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 A6NJY4 79 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 LRRC30A6NM36 301 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 H3BML4 177 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 HMGB3O15347 200 aaKnown RBP7.04□□□□□ -1.28
SKA2-201ENST00000330137 HSBP1O75506 76 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 OR2J3O76001 311 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 GDF1P27539 372 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 PTGDSP41222 190 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 PMP22Q01453 160 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 PSG7Q13046 419 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 SAMD13Q5VXD3 122 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 CARD17Q5XLA6 110 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 MKXQ8IYA7 352 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 FGFRL1Q8N441 504 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 OR2Y1Q8NGV0 311 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 OR1L1Q8NH94 360 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 OR1F12Q8NHA8 337 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 DPF1Q92782 380 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 TMEM186Q96B77 213 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 GPR27Q9NS67 375 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 MTCH1Q9NZJ7 389 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 WASHC3Q9Y3C0 194 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 EXPH5Q8NEV8 1989 aa7.04□□□□□ -1.28
SKA2-201ENST00000330137 GAGE10A6NGK3 116 aa7.03□□□□□ -1.28
SKA2-201ENST00000330137 OR2T8A6NH00 312 aa7.03□□□□□ -1.28
SKA2-201ENST00000330137 NUDT3O95989 172 aa7.03□□□□□ -1.28
SKA2-201ENST00000330137 IGLV2-14P01704 120 aa7.03□□□□□ -1.28
SKA2-201ENST00000330137 CRYAAP02489 173 aa7.03□□□□□ -1.28
SKA2-201ENST00000330137 OR5AL1P0C617 328 aa7.03□□□□□ -1.28
SKA2-201ENST00000330137 GPR6P46095 362 aaPredicted RBP7.03□□□□□ -1.28
SKA2-201ENST00000330137 LGALS7P47929 136 aa7.03□□□□□ -1.28
SKA2-201ENST00000330137 DMRTC1Q5HYR2 192 aa7.03□□□□□ -1.28
SKA2-201ENST00000330137 PLCXD3Q63HM9 321 aa7.03□□□□□ -1.28
SKA2-201ENST00000330137 C16orf54Q6UWD8 224 aa7.03□□□□□ -1.28
SKA2-201ENST00000330137 OR8I2Q8N0Y5 310 aa7.03□□□□□ -1.28
SKA2-201ENST00000330137 OR2AE1Q8NHA4 323 aa7.03□□□□□ -1.28
SKA2-201ENST00000330137 SGCZQ96LD1 299 aa7.03□□□□□ -1.28
SKA2-201ENST00000330137 SCO2A0A1W2PP80 73 aa7.03□□□□□ -1.28
SKA2-201ENST00000330137 LILRA5A6NI73 299 aa7.03□□□□□ -1.28
SKA2-201ENST00000330137 FAM90A9PA6NNJ1 464 aa7.03□□□□□ -1.28
SKA2-201ENST00000330137 RAB29O14966 203 aa7.03□□□□□ -1.28
SKA2-201ENST00000330137 SP9P0CG40 484 aa7.03□□□□□ -1.28
SKA2-201ENST00000330137 RPL31P62899 125 aaKnown RBP7.03□□□□□ -1.28
SKA2-201ENST00000330137 RTL8BQ17RB0 113 aa7.03□□□□□ -1.28
SKA2-201ENST00000330137 MTURNQ8N3F0 131 aa7.03□□□□□ -1.28
SKA2-201ENST00000330137 CHCHD1Q96BP2 118 aaKnown RBP7.03□□□□□ -1.28
SKA2-201ENST00000330137 CHRDL1Q9BU40 450 aa7.03□□□□□ -1.28
SKA2-201ENST00000330137 PHF7Q9BWX1 381 aaPredicted RBP7.03□□□□□ -1.28
SKA2-201ENST00000330137 TMEM191AQ9H0A3 160 aa7.03□□□□□ -1.28
SKA2-201ENST00000330137 ERRFI1Q9UJM3 462 aaPredicted RBP7.03□□□□□ -1.28
SKA2-201ENST00000330137 RALGAPA1Q6GYQ0 2036 aa7.03□□□□□ -1.28
SKA2-201ENST00000330137 H3BRM9 83 aa7.03□□□□□ -1.28
SKA2-201ENST00000330137 M0R2Z0 102 aa7.03□□□□□ -1.28
SKA2-201ENST00000330137 TFF3Q07654 80 aa7.03□□□□□ -1.28
SKA2-201ENST00000330137 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.03□□□□□ -1.28
SKA2-201ENST00000330137 CDCP2Q5VXM1 449 aa7.03□□□□□ -1.28
SKA2-201ENST00000330137 PATE1Q8WXA2 126 aa7.03□□□□□ -1.28
SKA2-201ENST00000330137 LRRC61Q9BV99 259 aa7.03□□□□□ -1.28
SKA2-201ENST00000330137 SSBP4Q9BWG4 385 aaPredicted RBP7.03□□□□□ -1.28
SKA2-201ENST00000330137 ZNF331Q9NQX6 463 aaPredicted RBP7.03□□□□□ -1.28
SKA2-201ENST00000330137 SLC25A10Q9UBX3 287 aaPredicted RBP7.03□□□□□ -1.28
SKA2-201ENST00000330137 H3BMH7 237 aa7.02□□□□□ -1.29
SKA2-201ENST00000330137 SLC17A3O00476 420 aa7.02□□□□□ -1.29
SKA2-201ENST00000330137 FASLGP48023 281 aa7.02□□□□□ -1.29
SKA2-201ENST00000330137 PCBD1P61457 104 aa7.02□□□□□ -1.29
SKA2-201ENST00000330137 EBLN2Q6P2I7 272 aa7.02□□□□□ -1.29
SKA2-201ENST00000330137 ATP5L2Q7Z4Y8 100 aa7.02□□□□□ -1.29
SKA2-201ENST00000330137 SFTPA2Q8IWL1 248 aa7.02□□□□□ -1.29
SKA2-201ENST00000330137 ZDHHC23Q8IYP9 409 aa7.02□□□□□ -1.29
SKA2-201ENST00000330137 TMEM45BQ96B21 275 aa7.02□□□□□ -1.29
SKA2-201ENST00000330137 OR2D2Q9H210 308 aa7.02□□□□□ -1.29
SKA2-201ENST00000330137 SCRT2Q9NQ03 307 aa7.02□□□□□ -1.29
SKA2-201ENST00000330137 TMEM189A5PLL7 270 aa7.02□□□□□ -1.29
SKA2-201ENST00000330137 PGPEP1LA6NFU8 196 aa7.02□□□□□ -1.29
SKA2-201ENST00000330137 ARL14EPLP0DKL9 152 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms