RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 OBP2BQ9NPH6 170 aa15.88■□□□□ 0.13
RTN4-201ENST00000317610 PSG11Q9UQ72 335 aa15.88■□□□□ 0.13
RTN4-201ENST00000317610 POLR3KQ9Y2Y1 108 aaPredicted RBP15.88■□□□□ 0.13
RTN4-201ENST00000317610 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.88■□□□□ 0.13
RTN4-201ENST00000317610 MDFIC2A0A1B0GVS7 189 aa15.88■□□□□ 0.13
RTN4-201ENST00000317610 IFNL4K9M1U5 179 aa15.88■□□□□ 0.13
RTN4-201ENST00000317610 HTD2P86397 168 aa15.88■□□□□ 0.13
RTN4-201ENST00000317610 TREML4Q6UXN2 200 aa15.88■□□□□ 0.13
RTN4-201ENST00000317610 OR52E5Q8NH55 327 aa15.88■□□□□ 0.13
RTN4-201ENST00000317610 WFIKKN1Q96NZ8 548 aa15.88■□□□□ 0.13
RTN4-201ENST00000317610 SNHG12Q9BXW3 62 aa15.88■□□□□ 0.13
RTN4-201ENST00000317610 CXXC4Q9H2H0 198 aa15.88■□□□□ 0.13
RTN4-201ENST00000317610 NAGKQ9UJ70 344 aa15.88■□□□□ 0.13
RTN4-201ENST00000317610 PGPEP1LA6NFU8 196 aa15.87■□□□□ 0.13
RTN4-201ENST00000317610 C15orf65H3BRN8 121 aa15.87■□□□□ 0.13
RTN4-201ENST00000317610 NUPR1O60356 82 aa15.87■□□□□ 0.13
RTN4-201ENST00000317610 ARL14EPLP0DKL9 152 aa15.87■□□□□ 0.13
RTN4-201ENST00000317610 BMP5P22003 454 aa15.87■□□□□ 0.13
RTN4-201ENST00000317610 IGHV1-2P23083 117 aa15.87■□□□□ 0.13
RTN4-201ENST00000317610 DUTP33316 252 aaKnown RBP15.87■□□□□ 0.13
RTN4-201ENST00000317610 PATZ1Q9HBE1 687 aaKnown RBP15.87■□□□□ 0.13
RTN4-201ENST00000317610 SPRR3Q9UBC9 169 aa15.87■□□□□ 0.13
RTN4-201ENST00000317610 IGHV3-43A0A0B4J1X8 118 aa15.86■□□□□ 0.13
RTN4-201ENST00000317610 SCGB1D1O95968 90 aa15.86■□□□□ 0.13
RTN4-201ENST00000317610 CXorf1O96002 111 aa15.86■□□□□ 0.13
RTN4-201ENST00000317610 ADH4P08319 380 aa15.86■□□□□ 0.13
RTN4-201ENST00000317610 IGHV3-43DP0DP04 118 aa15.86■□□□□ 0.13
RTN4-201ENST00000317610 OR10J1P30954 320 aa15.86■□□□□ 0.13
RTN4-201ENST00000317610 VDAC2P45880 294 aaPredicted RBP15.86■□□□□ 0.13
RTN4-201ENST00000317610 SELENOTP62341 195 aa15.86■□□□□ 0.13
RTN4-201ENST00000317610 WDR82Q6UXN9 313 aa15.86■□□□□ 0.13
RTN4-201ENST00000317610 CXorf67Q86X51 503 aaPredicted RBP15.86■□□□□ 0.13
RTN4-201ENST00000317610 MGST2Q99735 147 aa15.86■□□□□ 0.13
RTN4-201ENST00000317610 GGTLC1Q9BX51 225 aa15.86■□□□□ 0.13
RTN4-201ENST00000317610 METRNQ9UJH8 293 aa15.86■□□□□ 0.13
RTN4-201ENST00000317610 TRAV9-1A0A075B6T8 112 aa15.86■□□□□ 0.13
RTN4-201ENST00000317610 HPRT1P00492 218 aa15.86■□□□□ 0.13
RTN4-201ENST00000317610 TIMP3P35625 211 aa15.86■□□□□ 0.13
RTN4-201ENST00000317610 HOXA4Q00056 320 aaPredicted RBP15.86■□□□□ 0.13
RTN4-201ENST00000317610 TGFBR3Q03167 851 aa15.86■□□□□ 0.13
RTN4-201ENST00000317610 TRAT1Q6PIZ9 186 aa15.86■□□□□ 0.13
RTN4-201ENST00000317610 GMPPAQ96IJ6 420 aaPredicted RBP15.86■□□□□ 0.13
RTN4-201ENST00000317610 A0A1B0GUS0 222 aa15.85■□□□□ 0.13
RTN4-201ENST00000317610 PROP1O75360 226 aa15.85■□□□□ 0.13
RTN4-201ENST00000317610 TFF1P04155 84 aa15.85■□□□□ 0.13
RTN4-201ENST00000317610 ADMP35318 185 aa15.85■□□□□ 0.13
RTN4-201ENST00000317610 ZNF718Q3SXZ3 478 aa15.85■□□□□ 0.13
RTN4-201ENST00000317610 INO80CQ6PI98 192 aaPredicted RBP15.85■□□□□ 0.13
RTN4-201ENST00000317610 FAM216AQ8WUB2 273 aa15.85■□□□□ 0.13
RTN4-201ENST00000317610 DEFB127Q9H1M4 99 aa15.85■□□□□ 0.13
RTN4-201ENST00000317610 KITLGP21583 273 aa15.85■□□□□ 0.13
RTN4-201ENST00000317610 MS4A10Q96PG2 267 aa15.85■□□□□ 0.13
RTN4-201ENST00000317610 MS4A5Q9H3V2 200 aa15.85■□□□□ 0.13
RTN4-201ENST00000317610 FRYLO94915 3013 aa15.84■□□□□ 0.13
RTN4-201ENST00000317610 A0A1W2PNU3 283 aaPredicted RBP15.84■□□□□ 0.13
RTN4-201ENST00000317610 SCO2A0A1W2PP80 73 aa15.84■□□□□ 0.13
RTN4-201ENST00000317610 DEFB108AA8MXU0 73 aa15.84■□□□□ 0.13
RTN4-201ENST00000317610 SPINT2O43291 252 aa15.84■□□□□ 0.13
RTN4-201ENST00000317610 ESDP10768 282 aa15.84■□□□□ 0.13
RTN4-201ENST00000317610 TCF23Q7RTU1 214 aa15.84■□□□□ 0.13
RTN4-201ENST00000317610 TPRX1Q8N7U7 411 aa15.84■□□□□ 0.13
RTN4-201ENST00000317610 OR10G8Q8NGN5 311 aa15.84■□□□□ 0.13
RTN4-201ENST00000317610 RFESDQ8TAC1 157 aa15.84■□□□□ 0.13
RTN4-201ENST00000317610 Q8TCH9 128 aa15.84■□□□□ 0.13
RTN4-201ENST00000317610 CACNA1DQ01668 2161 aa15.84■□□□□ 0.13
RTN4-201ENST00000317610 HCFC1P51610 2035 aa15.84■□□□□ 0.13
RTN4-201ENST00000317610 TRGV5A0A0B4J1U4 118 aa15.84■□□□□ 0.13
RTN4-201ENST00000317610 M0R143 59 aa15.84■□□□□ 0.13
RTN4-201ENST00000317610 RRHO14718 337 aa15.84■□□□□ 0.13
RTN4-201ENST00000317610 LAMTOR5O43504 91 aa15.84■□□□□ 0.13
RTN4-201ENST00000317610 PRAMEF5Q5TYX0 476 aa15.84■□□□□ 0.13
RTN4-201ENST00000317610 PRAMEF6Q5VXH4 476 aa15.84■□□□□ 0.13
RTN4-201ENST00000317610 OCC1Q8TAD7 63 aa15.84■□□□□ 0.13
RTN4-201ENST00000317610 ZCCHC14Q8WYQ9 949 aaKnown RBP15.84■□□□□ 0.13
RTN4-201ENST00000317610 CBLN4Q9NTU7 201 aa15.84■□□□□ 0.13
RTN4-201ENST00000317610 MED13Q9UHV7 2174 aa15.84■□□□□ 0.13
RTN4-201ENST00000317610 GFRA3O60609 400 aa15.83■□□□□ 0.12
RTN4-201ENST00000317610 YPEL1O60688 119 aa15.83■□□□□ 0.12
RTN4-201ENST00000317610 FCGR3BO75015 233 aa15.83■□□□□ 0.12
RTN4-201ENST00000317610 RAB4AP20338 218 aa15.83■□□□□ 0.12
RTN4-201ENST00000317610 GPR12P47775 334 aa15.83■□□□□ 0.12
RTN4-201ENST00000317610 SMIM21Q3B7S5 101 aa15.83■□□□□ 0.12
RTN4-201ENST00000317610 MIC13Q5XKP0 118 aa15.83■□□□□ 0.12
RTN4-201ENST00000317610 OR4A16Q8NH70 328 aa15.83■□□□□ 0.12
RTN4-201ENST00000317610 CMTM2Q8TAZ6 248 aa15.83■□□□□ 0.12
RTN4-201ENST00000317610 YPEL2Q96QA6 119 aa15.83■□□□□ 0.12
RTN4-201ENST00000317610 TP53TG3Q9ULZ0 132 aa15.83■□□□□ 0.12
RTN4-201ENST00000317610 LSM4Q9Y4Z0 139 aaKnown RBP15.83■□□□□ 0.12
RTN4-201ENST00000317610 C1orf159Q96HA4 380 aa15.83■□□□□ 0.12
RTN4-201ENST00000317610 TMEM204Q9BSN7 226 aa15.83■□□□□ 0.12
RTN4-201ENST00000317610 LYZL6O75951 148 aa15.82■□□□□ 0.12
RTN4-201ENST00000317610 PAFAH1B2P68402 229 aa15.82■□□□□ 0.12
RTN4-201ENST00000317610 RELBQ01201 579 aa15.82■□□□□ 0.12
RTN4-201ENST00000317610 RNFT1Q5M7Z0 435 aa15.82■□□□□ 0.12
RTN4-201ENST00000317610 FAM90A1Q86YD7 464 aa15.82■□□□□ 0.12
RTN4-201ENST00000317610 C11orf52Q96A22 123 aa15.82■□□□□ 0.12
RTN4-201ENST00000317610 ZDHHC11Q9H8X9 412 aa15.82■□□□□ 0.12
RTN4-201ENST00000317610 HEYLQ9NQ87 328 aaPredicted RBP15.82■□□□□ 0.12
RTN4-201ENST00000317610 IL36BQ9NZH7 164 aa15.82■□□□□ 0.12
RTN4-201ENST00000317610 YTHDF2Q9Y5A9 579 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms