RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 AADACP22760 399 aa15.22■□□□□ 0.03
PDZRN3-202ENST00000308537 DYRK1AQ13627 763 aa15.22■□□□□ 0.03
PDZRN3-202ENST00000308537 VMA21Q3ZAQ7 101 aa15.22■□□□□ 0.03
PDZRN3-202ENST00000308537 C10orf55Q5SWW7 151 aa15.22■□□□□ 0.03
PDZRN3-202ENST00000308537 OR13F1Q8NGS4 319 aa15.22■□□□□ 0.03
PDZRN3-202ENST00000308537 SRSF12Q8WXF0 261 aaKnown RBP15.22■□□□□ 0.03
PDZRN3-202ENST00000308537 A0A1B0GW64 132 aa15.21■□□□□ 0.03
PDZRN3-202ENST00000308537 MSGN1A6NI15 193 aa15.21■□□□□ 0.03
PDZRN3-202ENST00000308537 APELAP0DMC3 54 aa15.21■□□□□ 0.03
PDZRN3-202ENST00000308537 CBX3Q13185 183 aa15.21■□□□□ 0.03
PDZRN3-202ENST00000308537 CDK10Q15131 360 aa15.21■□□□□ 0.03
PDZRN3-202ENST00000308537 MSMO1Q15800 293 aa15.21■□□□□ 0.03
PDZRN3-202ENST00000308537 OR2B11Q5JQS5 317 aa15.21■□□□□ 0.03
PDZRN3-202ENST00000308537 VKORC1L1Q8N0U8 176 aa15.21■□□□□ 0.03
PDZRN3-202ENST00000308537 PUSL1Q8N0Z8 303 aaKnown RBP15.21■□□□□ 0.03
PDZRN3-202ENST00000308537 MFSD4AQ8N468 514 aa15.21■□□□□ 0.03
PDZRN3-202ENST00000308537 HSD17B10Q99714 261 aaKnown RBP15.21■□□□□ 0.03
PDZRN3-202ENST00000308537 CCL28Q9NRJ3 127 aa15.21■□□□□ 0.03
PDZRN3-202ENST00000308537 ZNF256Q9Y2P7 627 aaPredicted RBP15.21■□□□□ 0.03
PDZRN3-202ENST00000308537 E7EUB6 86 aa15.2■□□□□ 0.02
PDZRN3-202ENST00000308537 PPYP01298 95 aa15.2■□□□□ 0.02
PDZRN3-202ENST00000308537 FCER2P06734 321 aa15.2■□□□□ 0.02
PDZRN3-202ENST00000308537 FCGR2CP31995 323 aa15.2■□□□□ 0.02
PDZRN3-202ENST00000308537 ZNF45Q02386 682 aa15.2■□□□□ 0.02
PDZRN3-202ENST00000308537 TNXAQ16473 311 aa15.2■□□□□ 0.02
PDZRN3-202ENST00000308537 ZNF429Q86V71 674 aa15.2■□□□□ 0.02
PDZRN3-202ENST00000308537 SLC25A46Q96AG3 418 aa15.2■□□□□ 0.02
PDZRN3-202ENST00000308537 KCTD12Q96CX2 325 aaKnown RBP15.2■□□□□ 0.02
PDZRN3-202ENST00000308537 TAS2R8Q9NYW2 309 aa15.2■□□□□ 0.02
PDZRN3-202ENST00000308537 KMT2CQ8NEZ4 4911 aaKnown RBP15.2■□□□□ 0.02
PDZRN3-202ENST00000308537 TRBV12-3P01733 135 aa15.19■□□□□ 0.02
PDZRN3-202ENST00000308537 SMIM18P0DKX4 95 aa15.19■□□□□ 0.02
PDZRN3-202ENST00000308537 NCS1P62166 190 aa15.19■□□□□ 0.02
PDZRN3-202ENST00000308537 UBE2NLQ5JXB2 153 aa15.19■□□□□ 0.02
PDZRN3-202ENST00000308537 ZNF343Q6P1L6 599 aa15.19■□□□□ 0.02
PDZRN3-202ENST00000308537 ZNF66Q6ZN08 573 aa15.19■□□□□ 0.02
PDZRN3-202ENST00000308537 GPR141Q7Z602 305 aa15.19■□□□□ 0.02
PDZRN3-202ENST00000308537 S100A16Q96FQ6 103 aaKnown RBP15.19■□□□□ 0.02
PDZRN3-202ENST00000308537 TRBV9A0A0B4J1U6 114 aa15.18■□□□□ 0.02
PDZRN3-202ENST00000308537 MEIS3P1A6NDR6 274 aa15.18■□□□□ 0.02
PDZRN3-202ENST00000308537 TEX22C9J3V5 150 aa15.18■□□□□ 0.02
PDZRN3-202ENST00000308537 NAT1P18440 290 aa15.18■□□□□ 0.02
PDZRN3-202ENST00000308537 CD40LGP29965 261 aa15.18■□□□□ 0.02
PDZRN3-202ENST00000308537 ARPC4P59998 168 aa15.18■□□□□ 0.02
PDZRN3-202ENST00000308537 IL34Q6ZMJ4 242 aa15.18■□□□□ 0.02
PDZRN3-202ENST00000308537 ANKRD13BQ86YJ7 626 aa15.18■□□□□ 0.02
PDZRN3-202ENST00000308537 MMD2Q8IY49 270 aa15.18■□□□□ 0.02
PDZRN3-202ENST00000308537 SAMD12Q8N8I0 201 aa15.18■□□□□ 0.02
PDZRN3-202ENST00000308537 OR5AP2Q8NGF4 316 aa15.18■□□□□ 0.02
PDZRN3-202ENST00000308537 TMEM167AQ8TBQ9 72 aa15.18■□□□□ 0.02
PDZRN3-202ENST00000308537 GIMAP1Q8WWP7 306 aa15.18■□□□□ 0.02
PDZRN3-202ENST00000308537 ZNF355PQ9NSJ1 428 aa15.18■□□□□ 0.02
PDZRN3-202ENST00000308537 PRELID3BQ9Y3B1 194 aa15.18■□□□□ 0.02
PDZRN3-202ENST00000308537 SAP30O75446 220 aa15.17■□□□□ 0.02
PDZRN3-202ENST00000308537 KBTBD11O94819 623 aa15.17■□□□□ 0.02
PDZRN3-202ENST00000308537 IL6RP08887 468 aaPredicted RBP15.17■□□□□ 0.02
PDZRN3-202ENST00000308537 OR9G9P0C7N8 305 aa15.17■□□□□ 0.02
PDZRN3-202ENST00000308537 TAS2R20P59543 309 aa15.17■□□□□ 0.02
PDZRN3-202ENST00000308537 CD69Q07108 199 aa15.17■□□□□ 0.02
PDZRN3-202ENST00000308537 DCTN2Q13561 401 aaKnown RBP15.17■□□□□ 0.02
PDZRN3-202ENST00000308537 KLF5Q13887 457 aaPredicted RBP15.17■□□□□ 0.02
PDZRN3-202ENST00000308537 VAX1Q5SQQ9 334 aa15.17■□□□□ 0.02
PDZRN3-202ENST00000308537 OR4S2Q8NH73 311 aa15.17■□□□□ 0.02
PDZRN3-202ENST00000308537 SECTM1Q8WVN6 248 aa15.17■□□□□ 0.02
PDZRN3-202ENST00000308537 TCTEX1D2Q8WW35 142 aa15.17■□□□□ 0.02
PDZRN3-202ENST00000308537 ACOT12Q8WYK0 555 aa15.17■□□□□ 0.02
PDZRN3-202ENST00000308537 RANGRFQ9HD47 186 aaPredicted RBP15.17■□□□□ 0.02
PDZRN3-202ENST00000308537 ADAM30Q9UKF2 790 aa15.17■□□□□ 0.02
PDZRN3-202ENST00000308537 MRPS7Q9Y2R9 242 aaKnown RBP15.17■□□□□ 0.02
PDZRN3-202ENST00000308537 A0A0G2JLM5 398 aa15.16■□□□□ 0.02
PDZRN3-202ENST00000308537 CGB1A6NKQ9 187 aa15.16■□□□□ 0.02
PDZRN3-202ENST00000308537 TNFSF12O43508 249 aa15.16■□□□□ 0.02
PDZRN3-202ENST00000308537 PRH1P02810 166 aa15.16■□□□□ 0.02
PDZRN3-202ENST00000308537 EIF4EP06730 217 aaKnown RBP15.16■□□□□ 0.02
PDZRN3-202ENST00000308537 SPNP16150 400 aa15.16■□□□□ 0.02
PDZRN3-202ENST00000308537 CBX5P45973 191 aa15.16■□□□□ 0.02
PDZRN3-202ENST00000308537 RORCP51449 518 aa15.16■□□□□ 0.02
PDZRN3-202ENST00000308537 VBP1P61758 197 aa15.16■□□□□ 0.02
PDZRN3-202ENST00000308537 ZNF818PQ6ZRF7 136 aa15.16■□□□□ 0.02
PDZRN3-202ENST00000308537 TTC9CQ8N5M4 171 aa15.16■□□□□ 0.02
PDZRN3-202ENST00000308537 AKIP1Q9NQ31 210 aa15.16■□□□□ 0.02
PDZRN3-202ENST00000308537 COA4Q9NYJ1 87 aa15.16■□□□□ 0.02
PDZRN3-202ENST00000308537 C13orf42A0A1B0GVH6 325 aa15.15■□□□□ 0.02
PDZRN3-202ENST00000308537 ANKRD34BA5PLL1 514 aa15.15■□□□□ 0.02
PDZRN3-202ENST00000308537 OR2A4O95047 310 aa15.15■□□□□ 0.02
PDZRN3-202ENST00000308537 GPR107Q5VW38 600 aa15.15■□□□□ 0.02
PDZRN3-202ENST00000308537 DHRS11Q6UWP2 260 aa15.15■□□□□ 0.02
PDZRN3-202ENST00000308537 C19orf35Q6ZS72 473 aa15.15■□□□□ 0.02
PDZRN3-202ENST00000308537 HAPLN4Q86UW8 402 aa15.15■□□□□ 0.02
PDZRN3-202ENST00000308537 ZBTB34Q8NCN2 500 aa15.15■□□□□ 0.02
PDZRN3-202ENST00000308537 AP3S1Q92572 193 aa15.15■□□□□ 0.02
PDZRN3-202ENST00000308537 USMG5Q96IX5 58 aa15.15■□□□□ 0.02
PDZRN3-202ENST00000308537 OR2A7Q96R45 310 aa15.15■□□□□ 0.02
PDZRN3-202ENST00000308537 DCUN1D5Q9BTE7 237 aa15.15■□□□□ 0.02
PDZRN3-202ENST00000308537 DMRT1Q9Y5R6 373 aa15.15■□□□□ 0.02
PDZRN3-202ENST00000308537 SMIM31A0A1B0GVY4 71 aa15.14■□□□□ 0.01
PDZRN3-202ENST00000308537 HMX3A6NHT5 357 aa15.14■□□□□ 0.01
PDZRN3-202ENST00000308537 RBFOX2O43251 390 aaKnown RBP eCLIP15.14■□□□□ 0.01
PDZRN3-202ENST00000308537 GABARAPO95166 117 aa15.14■□□□□ 0.01
PDZRN3-202ENST00000308537 IGLV1-51P01701 117 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms