RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 ZNF146Q15072 292 aa14.62□□□□□ -0.07
CDCP1-201ENST00000296129 IBA57Q5T440 356 aaKnown RBP14.62□□□□□ -0.07
CDCP1-201ENST00000296129 PUSL1Q8N0Z8 303 aaKnown RBP14.62□□□□□ -0.07
CDCP1-201ENST00000296129 DOCK4Q8N1I0 1966 aa14.62□□□□□ -0.07
CDCP1-201ENST00000296129 IGHV3OR16-10A0A075B7F0 116 aa14.62□□□□□ -0.07
CDCP1-201ENST00000296129 VPS25Q9BRG1 176 aa14.62□□□□□ -0.07
CDCP1-201ENST00000296129 PITPNC1Q9UKF7 332 aa14.62□□□□□ -0.07
CDCP1-201ENST00000296129 MFAP4P55083 255 aa14.62□□□□□ -0.07
CDCP1-201ENST00000296129 OR8A1Q8NGG7 326 aa14.62□□□□□ -0.07
CDCP1-201ENST00000296129 RAB24Q969Q5 203 aa14.62□□□□□ -0.07
CDCP1-201ENST00000296129 CGB1A6NKQ9 187 aa14.61□□□□□ -0.07
CDCP1-201ENST00000296129 PDLIM4P50479 330 aa14.61□□□□□ -0.07
CDCP1-201ENST00000296129 MFAP2P55001 183 aa14.61□□□□□ -0.07
CDCP1-201ENST00000296129 FAM3BP58499 235 aaPredicted RBP14.61□□□□□ -0.07
CDCP1-201ENST00000296129 REPIN1Q9BWE0 567 aaKnown RBP14.61□□□□□ -0.07
CDCP1-201ENST00000296129 MRPL13Q9BYD1 178 aaKnown RBP14.61□□□□□ -0.07
CDCP1-201ENST00000296129 SNCGO76070 127 aa14.61□□□□□ -0.07
CDCP1-201ENST00000296129 KBTBD11O94819 623 aa14.61□□□□□ -0.07
CDCP1-201ENST00000296129 LOC389332A0A1B0GUA5 103 aa14.61□□□□□ -0.07
CDCP1-201ENST00000296129 PSG7Q13046 419 aa14.61□□□□□ -0.07
CDCP1-201ENST00000296129 TMEM78Q5T7P6 136 aa14.61□□□□□ -0.07
CDCP1-201ENST00000296129 DNAJC4Q9NNZ3 241 aa14.61□□□□□ -0.07
CDCP1-201ENST00000296129 OR4C5Q8NGB2 326 aa14.61□□□□□ -0.07
CDCP1-201ENST00000296129 PINLYPA6NC86 204 aa14.61□□□□□ -0.07
CDCP1-201ENST00000296129 CD8AP01732 235 aa14.61□□□□□ -0.07
CDCP1-201ENST00000296129 ZNF738Q8NE65 137 aa14.61□□□□□ -0.07
CDCP1-201ENST00000296129 POM121Q96HA1 1249 aa14.61□□□□□ -0.07
CDCP1-201ENST00000296129 RPL7P18124 248 aaKnown RBP14.6□□□□□ -0.07
CDCP1-201ENST00000296129 BPIFA4PQ86YQ2 179 aa14.6□□□□□ -0.07
CDCP1-201ENST00000296129 DANCRP0C864 163 aa14.6□□□□□ -0.07
CDCP1-201ENST00000296129 FHITP49789 147 aa14.6□□□□□ -0.07
CDCP1-201ENST00000296129 PPOXP50336 477 aa14.6□□□□□ -0.07
CDCP1-201ENST00000296129 PQLC2Q6ZP29 291 aa14.6□□□□□ -0.07
CDCP1-201ENST00000296129 IGLV3-32A0A0A0MS00 114 aa14.6□□□□□ -0.07
CDCP1-201ENST00000296129 IGHV3-48P01763 117 aa14.6□□□□□ -0.07
CDCP1-201ENST00000296129 NR2C2APQ86WQ0 139 aa14.6□□□□□ -0.07
CDCP1-201ENST00000296129 OR13A1Q8NGR1 328 aa14.6□□□□□ -0.07
CDCP1-201ENST00000296129 OR10J6PQ8NGY7 276 aa14.6□□□□□ -0.07
CDCP1-201ENST00000296129 HSPB8Q9UJY1 196 aa14.6□□□□□ -0.07
CDCP1-201ENST00000296129 THSD7BQ9C0I4 1608 aa14.6□□□□□ -0.07
CDCP1-201ENST00000296129 PROB1E7EW31 1015 aa14.6□□□□□ -0.07
CDCP1-201ENST00000296129 RPL13AP40429 203 aaKnown RBP14.6□□□□□ -0.07
CDCP1-201ENST00000296129 RND3P61587 244 aa14.6□□□□□ -0.07
CDCP1-201ENST00000296129 NHLRC3Q5JS37 347 aa14.6□□□□□ -0.07
CDCP1-201ENST00000296129 PEAR1Q5VY43 1037 aaPredicted RBP14.6□□□□□ -0.07
CDCP1-201ENST00000296129 FAM216BQ8N7L0 139 aa14.6□□□□□ -0.07
CDCP1-201ENST00000296129 FAM209AQ5JX71 171 aa14.6□□□□□ -0.07
CDCP1-201ENST00000296129 ZNF343Q6P1L6 599 aa14.6□□□□□ -0.07
CDCP1-201ENST00000296129 ZNF383Q8NA42 475 aa14.59□□□□□ -0.07
CDCP1-201ENST00000296129 LYZL4Q96KX0 146 aa14.59□□□□□ -0.07
CDCP1-201ENST00000296129 TXNDC17Q9BRA2 123 aa14.59□□□□□ -0.07
CDCP1-201ENST00000296129 RTBDNQ9BSG5 229 aaPredicted RBP14.59□□□□□ -0.07
CDCP1-201ENST00000296129 PRR32B1ATL7 298 aa14.59□□□□□ -0.07
CDCP1-201ENST00000296129 J3QR89 54 aa14.59□□□□□ -0.07
CDCP1-201ENST00000296129 FOXD3Q9UJU5 478 aaPredicted RBP14.59□□□□□ -0.07
CDCP1-201ENST00000296129 NTN3O00634 580 aaPredicted RBP14.59□□□□□ -0.07
CDCP1-201ENST00000296129 PQLC2LA1A4F0 135 aa14.59□□□□□ -0.07
CDCP1-201ENST00000296129 C8orf88P0DMB2 117 aa14.59□□□□□ -0.07
CDCP1-201ENST00000296129 FXYD3Q14802 87 aa14.59□□□□□ -0.07
CDCP1-201ENST00000296129 HSPB7Q9UBY9 170 aa14.59□□□□□ -0.07
CDCP1-201ENST00000296129 TM4SF20Q53R12 229 aa14.58□□□□□ -0.07
CDCP1-201ENST00000296129 ZNF362Q5T0B9 420 aaPredicted RBP14.58□□□□□ -0.07
CDCP1-201ENST00000296129 A0A1W2PS18 150 aa14.58□□□□□ -0.08
CDCP1-201ENST00000296129 A8MWL6 223 aa14.58□□□□□ -0.08
CDCP1-201ENST00000296129 IQCF6A8MYZ5 107 aa14.58□□□□□ -0.08
CDCP1-201ENST00000296129 KLF7O75840 302 aaPredicted RBP14.58□□□□□ -0.08
CDCP1-201ENST00000296129 EBLN2Q6P2I7 272 aa14.58□□□□□ -0.08
CDCP1-201ENST00000296129 OR51M1Q9H341 326 aa14.58□□□□□ -0.08
CDCP1-201ENST00000296129 H3BTX0 84 aa14.58□□□□□ -0.08
CDCP1-201ENST00000296129 CA2P00918 260 aa14.58□□□□□ -0.08
CDCP1-201ENST00000296129 DCTN5Q9BTE1 182 aa14.58□□□□□ -0.08
CDCP1-201ENST00000296129 TRAV30A0A087WSZ9 112 aa14.58□□□□□ -0.08
CDCP1-201ENST00000296129 SMIM6P0DI80 62 aa14.58□□□□□ -0.08
CDCP1-201ENST00000296129 STPG3Q8N7X2 389 aa14.58□□□□□ -0.08
CDCP1-201ENST00000296129 ATP5G2Q06055 141 aa14.57□□□□□ -0.08
CDCP1-201ENST00000296129 J3QRE1 110 aa14.57□□□□□ -0.08
CDCP1-201ENST00000296129 SS18L1O75177 396 aaPredicted RBP14.57□□□□□ -0.08
CDCP1-201ENST00000296129 C2orf68Q2NKX9 166 aa14.57□□□□□ -0.08
CDCP1-201ENST00000296129 MYOZ3Q8TDC0 251 aa14.57□□□□□ -0.08
CDCP1-201ENST00000296129 TGIF2-C20orf24A0A0A6YYL0 155 aa14.57□□□□□ -0.08
CDCP1-201ENST00000296129 CBY3A6NI87 242 aa14.57□□□□□ -0.08
CDCP1-201ENST00000296129 COMPP49747 757 aaPredicted RBP14.57□□□□□ -0.08
CDCP1-201ENST00000296129 LHFPL5Q8TAF8 219 aa14.57□□□□□ -0.08
CDCP1-201ENST00000296129 VN1R17PQ8TDU5 208 aa14.57□□□□□ -0.08
CDCP1-201ENST00000296129 NPIPB3Q92617 1050 aa14.57□□□□□ -0.08
CDCP1-201ENST00000296129 NPIPB11E5RHQ5 1161 aa14.57□□□□□ -0.08
CDCP1-201ENST00000296129 TRGC2P03986 189 aa14.57□□□□□ -0.08
CDCP1-201ENST00000296129 BET1LQ9NYM9 111 aa14.57□□□□□ -0.08
CDCP1-201ENST00000296129 RLFQ13129 1914 aa14.57□□□□□ -0.08
CDCP1-201ENST00000296129 KIR2DL2P43627 348 aaPredicted RBP14.57□□□□□ -0.08
CDCP1-201ENST00000296129 HERVK_113P61574 105 aa14.57□□□□□ -0.08
CDCP1-201ENST00000296129 NABP2Q9BQ15 211 aa14.57□□□□□ -0.08
CDCP1-201ENST00000296129 SPRR3Q9UBC9 169 aa14.57□□□□□ -0.08
CDCP1-201ENST00000296129 SBF1O95248 1867 aa14.56□□□□□ -0.08
CDCP1-201ENST00000296129 A0A087X0M5 115 aa14.56□□□□□ -0.08
CDCP1-201ENST00000296129 A0A1B0GX30 115 aa14.56□□□□□ -0.08
CDCP1-201ENST00000296129 C17orf98A8MV24 154 aa14.56□□□□□ -0.08
CDCP1-201ENST00000296129 CD59P13987 128 aa14.56□□□□□ -0.08
CDCP1-201ENST00000296129 C1QTNF12Q5T7M4 302 aa14.56□□□□□ -0.08
CDCP1-201ENST00000296129 ZNF841Q6ZN19 808 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms