RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 APELAP0DMC3 54 aa13.25□□□□□ -0.29
TFF3-201ENST00000291525 LYL1P12980 280 aa13.25□□□□□ -0.29
TFF3-201ENST00000291525 GNG2P59768 71 aa13.25□□□□□ -0.29
TFF3-201ENST00000291525 DEFA5Q01523 94 aa13.25□□□□□ -0.29
TFF3-201ENST00000291525 TPRA1Q86W33 373 aa13.25□□□□□ -0.29
TFF3-201ENST00000291525 Q8N1Y9 231 aa13.25□□□□□ -0.29
TFF3-201ENST00000291525 Q8N402 240 aa13.25□□□□□ -0.29
TFF3-201ENST00000291525 FCGR1BQ92637 280 aa13.25□□□□□ -0.29
TFF3-201ENST00000291525 CITED4Q96RK1 184 aa13.25□□□□□ -0.29
TFF3-201ENST00000291525 IGKV1D-8A0A087WSZ0 117 aa13.24□□□□□ -0.29
TFF3-201ENST00000291525 PSMB9P28065 219 aa13.24□□□□□ -0.29
TFF3-201ENST00000291525 FGF9P31371 208 aaPredicted RBP13.24□□□□□ -0.29
TFF3-201ENST00000291525 RHOGP84095 191 aa13.24□□□□□ -0.29
TFF3-201ENST00000291525 ATP5G2Q06055 141 aa13.24□□□□□ -0.29
TFF3-201ENST00000291525 EXOSC2Q13868 293 aaKnown RBP13.24□□□□□ -0.29
TFF3-201ENST00000291525 MRGPRG-AS1Q2M3A8 158 aa13.24□□□□□ -0.29
TFF3-201ENST00000291525 UBE2UQ5VVX9 321 aa13.24□□□□□ -0.29
TFF3-201ENST00000291525 CNIH2Q6PI25 160 aa13.24□□□□□ -0.29
TFF3-201ENST00000291525 NR2C2APQ86WQ0 139 aa13.24□□□□□ -0.29
TFF3-201ENST00000291525 OR2K2Q8NGT1 345 aa13.24□□□□□ -0.29
TFF3-201ENST00000291525 VSTM2AQ8TAG5 236 aa13.24□□□□□ -0.29
TFF3-201ENST00000291525 ZNF430Q9H8G1 570 aaPredicted RBP13.24□□□□□ -0.29
TFF3-201ENST00000291525 C19orf73Q9NVV2 129 aa13.24□□□□□ -0.29
TFF3-201ENST00000291525 RBMX2Q9Y388 322 aaKnown RBP13.24□□□□□ -0.29
TFF3-201ENST00000291525 SMIM30A4D0T7 59 aa13.23□□□□□ -0.29
TFF3-201ENST00000291525 J3QRK9 145 aa13.23□□□□□ -0.29
TFF3-201ENST00000291525 HLA-DQB1P01920 261 aa13.23□□□□□ -0.29
TFF3-201ENST00000291525 IL34Q6ZMJ4 242 aa13.23□□□□□ -0.29
TFF3-201ENST00000291525 OR4S2Q8NH73 311 aa13.23□□□□□ -0.29
TFF3-201ENST00000291525 ISOC1Q96CN7 298 aa13.23□□□□□ -0.29
TFF3-201ENST00000291525 HSD17B10Q99714 261 aaKnown RBP13.23□□□□□ -0.29
TFF3-201ENST00000291525 SPATA25Q9BR10 227 aa13.23□□□□□ -0.29
TFF3-201ENST00000291525 Q9H521 79 aa13.23□□□□□ -0.29
TFF3-201ENST00000291525 TUBA4BQ9H853 241 aa13.23□□□□□ -0.29
TFF3-201ENST00000291525 TXNL4BQ9NX01 149 aaKnown RBP13.23□□□□□ -0.29
TFF3-201ENST00000291525 ELF5Q9UKW6 265 aaPredicted RBP13.23□□□□□ -0.29
TFF3-201ENST00000291525 SSR3Q9UNL2 185 aa13.23□□□□□ -0.29
TFF3-201ENST00000291525 TMEM235A6NFC5 223 aa13.22□□□□□ -0.29
TFF3-201ENST00000291525 TRBV12-3P01733 135 aa13.22□□□□□ -0.29
TFF3-201ENST00000291525 CSN3P07498 182 aa13.22□□□□□ -0.29
TFF3-201ENST00000291525 NFYAP23511 347 aaPredicted RBP13.22□□□□□ -0.29
TFF3-201ENST00000291525 TTC9CQ8N5M4 171 aa13.22□□□□□ -0.29
TFF3-201ENST00000291525 NECAP1Q8NC96 275 aa13.22□□□□□ -0.29
TFF3-201ENST00000291525 NUDCD2Q8WVJ2 157 aa13.22□□□□□ -0.29
TFF3-201ENST00000291525 AKIP1Q9NQ31 210 aa13.22□□□□□ -0.29
TFF3-201ENST00000291525 DAPK2Q9UIK4 370 aa13.22□□□□□ -0.29
TFF3-201ENST00000291525 HUWE1Q7Z6Z7 4374 aaKnown RBP13.21□□□□□ -0.29
TFF3-201ENST00000291525 TRBV9A0A0B4J1U6 114 aa13.21□□□□□ -0.29
TFF3-201ENST00000291525 DPPA5A6NC42 116 aa13.21□□□□□ -0.29
TFF3-201ENST00000291525 OR2B11Q5JQS5 317 aa13.21□□□□□ -0.29
TFF3-201ENST00000291525 TCTEX1D2Q8WW35 142 aa13.21□□□□□ -0.29
TFF3-201ENST00000291525 KCTD12Q96CX2 325 aaKnown RBP13.21□□□□□ -0.29
TFF3-201ENST00000291525 OR51E2Q9H255 320 aa13.21□□□□□ -0.29
TFF3-201ENST00000291525 ANXA10Q9UJ72 324 aa13.21□□□□□ -0.29
TFF3-201ENST00000291525 ZNF257Q9Y2Q1 563 aa13.21□□□□□ -0.29
TFF3-201ENST00000291525 RRP15Q9Y3B9 282 aaKnown RBP13.21□□□□□ -0.29
TFF3-201ENST00000291525 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.2□□□□□ -0.3
TFF3-201ENST00000291525 KBTBD11O94819 623 aa13.2□□□□□ -0.3
TFF3-201ENST00000291525 PRH1P02810 166 aa13.2□□□□□ -0.3
TFF3-201ENST00000291525 IFNA6P05013 189 aa13.2□□□□□ -0.3
TFF3-201ENST00000291525 MAS1LP35410 378 aa13.2□□□□□ -0.3
TFF3-201ENST00000291525 KIR2DS2P43631 304 aa13.2□□□□□ -0.3
TFF3-201ENST00000291525 SCAND1P57086 179 aa13.2□□□□□ -0.3
TFF3-201ENST00000291525 ARPC4P59998 168 aa13.2□□□□□ -0.3
TFF3-201ENST00000291525 SFXN4Q6P4A7 337 aa13.2□□□□□ -0.3
TFF3-201ENST00000291525 LAX1Q8IWV1 398 aa13.2□□□□□ -0.3
TFF3-201ENST00000291525 SPARTQ8N0X7 666 aa13.2□□□□□ -0.3
TFF3-201ENST00000291525 LGALS14Q8TCE9 139 aa13.2□□□□□ -0.3
TFF3-201ENST00000291525 DYNLRB2Q8TF09 96 aa13.2□□□□□ -0.3
TFF3-201ENST00000291525 OR2A7Q96R45 310 aa13.2□□□□□ -0.3
TFF3-201ENST00000291525 YTHDF1Q9BYJ9 559 aaKnown RBP13.2□□□□□ -0.3
TFF3-201ENST00000291525 RHBDL2Q9NX52 303 aa13.2□□□□□ -0.3
TFF3-201ENST00000291525 ADAM30Q9UKF2 790 aa13.2□□□□□ -0.3
TFF3-201ENST00000291525 RYR3Q15413 4870 aa13.2□□□□□ -0.3
TFF3-201ENST00000291525 BMPR1BO00238 502 aa13.19□□□□□ -0.3
TFF3-201ENST00000291525 RBMXL2O75526 392 aaKnown RBP13.19□□□□□ -0.3
TFF3-201ENST00000291525 DHFRP00374 187 aa13.19□□□□□ -0.3
TFF3-201ENST00000291525 HRASP01112 189 aa13.19□□□□□ -0.3
TFF3-201ENST00000291525 RPL27AP46776 148 aaKnown RBP13.19□□□□□ -0.3
TFF3-201ENST00000291525 RPL30P62888 115 aaKnown RBP13.19□□□□□ -0.3
TFF3-201ENST00000291525 ZNF45Q02386 682 aa13.19□□□□□ -0.3
TFF3-201ENST00000291525 C15orf32Q32M92 178 aa13.19□□□□□ -0.3
TFF3-201ENST00000291525 C10orf55Q5SWW7 151 aa13.19□□□□□ -0.3
TFF3-201ENST00000291525 ZNF66Q6ZN08 573 aa13.19□□□□□ -0.3
TFF3-201ENST00000291525 AIFM2Q9BRQ8 373 aa13.19□□□□□ -0.3
TFF3-201ENST00000291525 SPATA2Q9UM82 520 aa13.19□□□□□ -0.3
TFF3-201ENST00000291525 IGKV1D-13A0A0B4J2D9 117 aa13.18□□□□□ -0.3
TFF3-201ENST00000291525 NPIPB5A8MRT5 1133 aa13.18□□□□□ -0.3
TFF3-201ENST00000291525 OR2J3O76001 311 aa13.18□□□□□ -0.3
TFF3-201ENST00000291525 IGKV1-13P0DP09 117 aa13.18□□□□□ -0.3
TFF3-201ENST00000291525 MSMO1Q15800 293 aa13.18□□□□□ -0.3
TFF3-201ENST00000291525 TMEM167AQ8TBQ9 72 aa13.18□□□□□ -0.3
TFF3-201ENST00000291525 THAP7Q9BT49 309 aaPredicted RBP13.18□□□□□ -0.3
TFF3-201ENST00000291525 SLC2A8Q9NY64 477 aa13.18□□□□□ -0.3
TFF3-201ENST00000291525 ETV7Q9Y603 341 aa13.18□□□□□ -0.3
TFF3-201ENST00000291525 GGCTO75223 188 aaKnown RBP13.17□□□□□ -0.3
TFF3-201ENST00000291525 IGLV2-14P01704 120 aa13.17□□□□□ -0.3
TFF3-201ENST00000291525 HAGHQ16775 308 aa13.17□□□□□ -0.3
TFF3-201ENST00000291525 VKORC1L1Q8N0U8 176 aa13.17□□□□□ -0.3
TFF3-201ENST00000291525 PUSL1Q8N0Z8 303 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms